Gene Details:

  • Gene ID: AT5G21140
  • Gene Symbol: emb1379, NSE1
  • Gene Name: embryo defective 1379
  • Description: embryo defective 1379;(source:Araport11)
  • TAIR Accession: locus:2179003
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Gene Ontology:

  • GO:0006302  — acts upstream of or within — double-strand break repair
  • GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
  • GO:0030915  — part of — Smc5-Smc6 complex
  • GO:0005634  — located in — nucleus
  • GO:0000724  — involved in — double-strand break repair via homologous recombination
  • GO:0005515  — enables — protein binding
  • GO:0005634  — is active in — nucleus

Germplasm Phenotype:

  • CS16151  — Abnormal cell divisions become increasingly serious as embryo development progresses. Transportation and distribution of auxin disturbed. Vacuolar cell death and necrosis.
  • CS16151  — Heterozygotes segregate for approximately 25% embryo lethality. Mutant embryos have defects in mitotic cell division of the embryo and endosperm.
  • CS24066  — Abnormal cell divisions become increasingly serious as embryo development progresses. Transportation and distribution of auxin disturbed. Vacuolar cell death and necrosis.
  • CS24066  — Heterozygotes segregate for approximately 25% embryo lethality. Mutant embryos have defects in mitotic cell division of the embryo and endosperm.
  • CS24066  — embryo defective; globular
  • nse1-1 nse3-2  — 43.7% embryo abortive, 2 types of abnormal embryos

Literature:

Sequence:

cDNA Sequence
  • >AT5G21140.1 AAATAATTTTATGGCGTCATCGTGTCGATAACGCTTCCCGCCATTCCGTCTCTCTCTCACCGCACTTTCTGTCTCCCCAACAAATACAAAACCCTAATTCACAGAAACAATCAGGGTTCACCAGATTCTAAAACCCTAGCTTTTTCATACTGTGAAATTACGGAGGTCTCTAAGGATGGCATCGCTAAGCTGGAAGCACCATACCCTAATTCAGGCTTTGATTTCACGAGGTCCTCTCAAGGAGAAAGAATTTCACTCAATCTTCACCGCCGTCACCGGCAGAAACCCAGTAACTGTTAAAAAAATATTTGACAAGTACCTTCTTGAGATAAACAAGGAACTCTCATATGTTCACTTTGAGTTGAAGGCTTGTAGAGATCAGTATGATGGCCAAGTTTGTTATGGAGTCGTTAACAATGTGGCTGATGATCAATCCAAACTCGGGACTAAATATTCTGTTCCCCAGATTGCATTTTTTAAAGGCATTATAGAAGCAATTGCACAGGATGAAGCTGCTCAAGGTTGCATATCGAGCTTTGATGCTCTTAATATTCGATTGGAGAATCAGATATCAAGTGAAGCCAGCAGCAGTCAACAGCAAGTCCCTCCTGCTTTCAAGAACTTTTCAATGACACAAAAGGAAAAAACTCTCGATGAACTTGTAAGGGACAAGTGGCTGTGCCGCACAAGAGAGAGAAACATTGGACTTGGTATAAGATCTCTTCTTGACCTTCGCAGTTGGTTCAGAAACAATGATGTTCCTTCCTGTGAGGTCTGCAATGAAGCTGGAGTAAAGGCAGATTTGTGTCCAACCGAAGGTTGCCCTGTCCGGATACACAAGTACTGCCTCAAAAAATTGTTATCTCAAAGGGATGATAAACGTTGCTCTGGTTGCGGGAAGCCATGGCCCTTGAGTAAAATTACAAAAACAGAAGCTGCTGAAGAAGCAATGAATGATGAAGAGGAAAGCGAGACTCAAGCAACAGCTCCAAAAGCCAAAAGAAGAAGACAACAGCGAGACTCAACTGAAAATGGTTCTTCTCAAGCTTCTTTAGCTTCAACTAGTGGTGCTAATACGAGAAGAGTAACCCGTAGCGTTGGGCACTCGAGGTAAAAAACCGTTTAAGAACTCCGGTTTTAGGGCTTAGATGTATATTTTGATGGCCGTTCTATGTCCAAACATCACTAGAAGTTTGGTATGATCTGATGCTTTCTCTTGTGGATCATTAATGGAGTCATGGAGTGTTAAAATATATTTAAACTCCTCGGTTAAAGTCTACAATATATTTAAATTTTAATTCCGAGAATTTATACTAAAATGTGATTTTGTCCTTTGTGCATTTAACTAAAATTCAAATGAACTTATAAATGTAAAATTTTAATTTAAAATTTTTTATTTAAGAATGGTAGGATATCTTAAAATATTTCAACAAA
CDS Sequence
Protein Sequence