Gene Details:
- Gene ID: AT5G22800
- Gene Symbol: EMB1030, EMB263, EMB86
- Gene Name: EMBRYO DEFECTIVE 1030, EMBRYO DEFECTIVE 263, EMBRYO DEFECTIVE 86
- Description: Alanyl-tRNA synthetase, class IIc;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Germplasm Phenotype:
- CS3046 — developmental arrest of mutant embryos occurs at cotyledon stage (globular, distorted linear); white seeds; white to pale yellow-green embryos; 25.5% mutant; 45.8% aborted seeds in top half of silique.
- CS84628 — embryo defective
Literature:
- An embryo-defective mutant of arabidopsis disrupted in the final step of biotin synthesis. DOI: 10.1104/pp.116.3.935 ; PMID: 9501126
- Embryonic Lethals and T-DNA Insertional Mutagenesis in Arabidopsis. DOI: 10.1105/tpc.3.2.149 ; PMID: 12324593
- Transcriptome analysis of sulfur depletion in Arabidopsis thaliana: interlacing of biosynthetic pathways provides response specificity. DOI: 10.1046/j.1365-313x.2003.01657.x ; PMID: 12609038
- Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. DOI: 10.1073/pnas.0504682102 ; PMID: 16251277
- Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02580.x ; PMID: 16297076
- Nuclear photosynthetic gene expression is synergistically modulated by rates of protein synthesis in chloroplasts and mitochondria. DOI: 10.1105/tpc.105.039073 ; PMID: 16517761
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes. DOI: 10.1371/journal.pone.0007386 ; PMID: 19812694
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. DOI: 10.1073/pnas.0504682102 ; PMID: 16251277
- Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02580.x ; PMID: 16297076
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequence:
cDNA Sequence
- >AT5G22800.1 ATTAAATTTTTTTTGATTAAAAATCTTTCAAACCAAACGAAGTGGATAAAAAAACGCTTGAAGGCTAGCTAGTGTGTCTTCTTCTTCTCCCTGAAACTCTCCCTCCTCATACTCTCTGATGAATTTCTCCAGAGTAAACCTCTTCGATTTTCCTCTTAGACCAATTTTGCTTTCGCATCCTTCTTCTATTTTCGTTTCTACACGTTTTGTTACCAGAACCTCTGCAGGTGTTTCTCCTTCTATCTTACTTCCCAGATCAACTCAGTCTCCTCAGATTATTGCTAAGAGCTCATCAGTATCAGTACAGCCAGTGTCTGAGGATGCTAAGGAGGATTATCAGTCCAAAGATGTTAGTGGAGATTCAATACGGCGGCGTTTTCTTGAATTCTTTGCTTCTCGTGGTCATAAGGTGCTTCCAAGTTCGTCTCTTGTACCAGAAGATCCTACCGTCTTGCTAACAATTGCAGGAATGCTTCAGTTTAAGCCTATTTTCCTTGGAAAGGTACCTAGAGAGGTTCCTTGTGCAACCACTGCGCAAAGGTGTATACGTACGAATGATTTGGAGAATGTTGGGAAAACGGCTAGGCACCATACTTTCTTTGAGATGCTTGGGAACTTTAGCTTTGGTGATTACTTCAAGAAAGAAGCGATAAAATGGGCATGGGAGCTTTCAACTATTGAGTTTGGGCTACCAGCTAATAGAGTTTGGGTTAGTATATATGAAGACGATGATGAAGCTTTTGAAATCTGGAAGAATGAAGTTGGTGTTTCTGTTGAGCGGATAAAGAGAATGGGTGAAGCTGACAACTTTTGGACTAGTGGACCAACTGGTCCTTGTGGTCCATGCTCTGAGTTGTACTATGACTTCTATCCTGAGAGAGGTTATGATGAAGATGTTGATCTTGGGGATGATACCAGATTTATTGAGTTCTATAATTTGGTTTTCATGCAGTATAACAAGACGGAAGATGGATTGCTTGAGCCCTTGAAACAGAAGAATATAGATACTGGTCTTGGTTTGGAACGTATAGCTCAAATCCTTCAGAAGGTTCCAAACAACTACGAGACAGATTTGATATATCCAATCATTGCAAAGATCTCAGAGTTGGCGAATATCTCATATGACTCTGCAAATGACAAGGCAAAGACAAGTTTAAAAGTGATTGCAGATCACATGCGGGCAGTTGTCTATCTCATATCAGATGGTGTTTCTCCTTCAAATATTGGCAGAGGTTATGTGGTTAGGAGGCTAATAAGAAGAGCAGTTCGGAAGGGGAAGTCTCTCGGAATAAATGGGGATATGAATGGTAATCTAAAGGGAGCGTTTTTGCCAGCGGTTGCTGAAAAGGTGATAGAGTTGAGCACTTATATTGATTCAGATGTAAAACTAAAGGCCTCACGCATCATTGAGGAGATTAGGCAAGAAGAACTTCACTTTAAGAAAACTCTGGAAAGAGGAGAAAAGTTACTTGACCAAAAGCTTAACGATGCATTGTCAATTGCTGATAAAACTAAGGATACGCCTTATCTGGATGGAAAAGATGCGTTTCTTCTTTATGACACATTTGGCTTTCCTGTGGAGATAACTGCAGAAGTTGCTGAAGAACGTGGAGTCAGTATAGATATGAATGGTTTTGAAGTGGAAATGGAGAATCAAAGACGTCAATCTCAAGCTGCTCACAATGTTGTAAAACTGACAGTTGAAGACGATGCTGACATGACGAAAAATATTGCAGACACTGAGTTCCTTGGATATGACAGTCTCTCTGCTCGTGCTGTTGTGAAAAGTCTTTTGGTGAATGGGAAGCCTGTGATAAGGGTTTCTGAAGGCAGTGAAGTAGAGGTTCTGCTGGACAGAACTCCGTTCTATGCTGAATCAGGAGGTCAAATTGCAGATCATGGTTTTCTTTATGTTAGCAGTGATGGGAACCAAGAGAAAGCTGTTGTTGAGGTAAGTGATGTGCAGAAGTCTCTTAAAATTTTTGTTCACAAGGGCACTGTAAAAAGTGGAGCTCTAGAAGTTGGCAAGGAGGTGGAAGCAGCAGTAGATGCAGACTTGAGGCAACGAGCGAAGGTTCACCATACCGCCACTCATTTGCTCCAATCGGCACTTAAAAAAGTAGTAGGACAAGAAACATCACAGGCTGGTTCATTAGTAGCTTTTGACCGCCTCAGATTCGATTTCAATTTTAATCGGTCCCTGCATGATAATGAGCTTGAGGAAATCGAATGCCTGATCAATAGGTGGATTGGGGATGCTACACGTCTTGAAACAAAAGTCCTTCCTCTTGCTGATGCAAAACGTGCTGGAGCCATCGCAATGTTTGGGGAAAAATATGATGAAAACGAGGTTCGTGTAGTAGAAGTTCCTGGTGTCTCCATGGAACTTTGTGGTGGCACTCATGTTGGCAATACTGCAGAAATACGAGCCTTCAAGATTATCTCAGAACAGGGCATTGCATCTGGAATCCGGCGTATAGAAGCGGTTGCAGGTGAAGCATTCATTGAATACATAAACTCACGGGATTCTCAAATGACACGTCTATGCTCGACTCTCAAGGTGAAAGCAGAGGATGTTACAAACAGAGTGGAGAATCTTCTAGAGGAACTACGTGCTGCTAGAAAAGAAGCCTCCGACTTGCGTTCAAAAGCAGCTGTCTATAAAGCATCTGTCATATCGAACAAAGCATTTACTGTAGGAACTTCACAGACTATAAGAGTGCTCGTTGAGTCGATGGATGACACCGATGCTGACTCATTAAAGAGTGCAGCTGAGCATTTGATAAGCACATTGGAAGATCCAGTCGCTGTGGTACTAGGATCATCTCCAGAAAAAGACAAGGTTAGTTTAGTTGCTGCATTTAGTCCTGGAGTAGTCTCCCTAGGTGTTCAAGCAGGGAAATTCATTGGCCCCATAGCTAAGCTGTGTGGCGGAGGAGGTGGTGGAAAGCCCAATTTTGCTCAGGCAGGCGGCAGAAAGCCTGAAAATCTCCCAAGTGCCTTAGAGAAAGCTCGGGAAGATCTCGTGGCAACTCTATCCGAAAAGCTAGGGTGAAGCACAAACTTCAAAAGTGATCTGCGTGTACAGAGAGAAGGAAGAGCACATTGCTTGATTCTAGACAAGTGTATTGCATGTATAGATGATAGACATTAAAGATATTTGATGTATCTAGTTTTTGAACATTAAATGATCAATGACATTTCTTTTAATGAATGAGGGACTATGTTTCGATTTGCTTTACTCATTGAACGTCGTCTCAATGGTTTTGGACGTATTACAAAAAGTGAATCTGTGTATATTTAACATAGCATTATAGCAAGTTATGAAGAGAATGTCATGCTTTCTGTGCGCGTAGAGAGCTTTTGACGAGGGTGAGATGAAGTTGTAGGCAGTTGAGACGACCGCGTTTTGACTCTGTTGGATTGTGTCACCGGAGTTACTGATGCGGTGATATTATTGCATTTGTGGTTGAAGTTTCGGTTCCTGTACTCTTTTCTTTTTTCCCAAATTCAGGGTCCGGTTCAATTT
- >AT5G22800.2 ATTAAATTTTTTTTGATTAAAAATCTTTCAAACCAAACGAAGTGGATAAAAAAACGCTTGAAGGCTAGCTAGTGTGTCTTCTTCTTCTCCCTGAAACTCTCCCTCCTCATACTCTCTGATGAATTTCTCCAGAGTAAACCTCTTCGATTTTCCTCTTAGACCAATTTTGCTTTCGCATCCTTCTTCTATTTTCGTTTCTACACGTTTTGTTACCAGAACCTCTGCAGGTGTTTCTCCTTCTATCTTACTTCCCAGATCAACTCAGTCTCCTCAGATTATTGCTAAGAGCTCATCAGTATCAGTACAGCCAGTGTCTGAGGATGCTAAGGAGGATTATCAGTCCAAAGATGTTAGTGGAGATTCAATACGGCGGCGTTTTCTTGAATTCTTTGCTTCTCGTGGTCATAAGGTGCTTCCAAGTTCGTCTCTTGTACCAGAAGATCCTACCGTCTTGCTAACAATTGCAGGAATGCTTCAGTTTAAGCCTATTTTCCTTGGAAAGGTACCTAGAGAGGTTCCTTGTGCAACCACTGCGCAAAGGTGTATACGTACGAATGATTTGGAGAATGTTGGGAAAACGGCTAGGCACCATACTTTCTTTGAGATGCTTGGGAACTTTAGCTTTGGTGATTACTTCAAGAAAGAAGCGATAAAATGGGCATGGGAGCTTTCAACTATTGAGTTTGGGCTACCAGCTAATAGAGTTTGGGTTAGTATATATGAAGACGATGATGAAGCTTTTGAAATCTGGAAGAATGAAGTTGGTGTTTCTGTTGAGCGGATAAAGAGAATGGGTGAAGCTGACAACTTTTGGACTAGTGGACCAACTGGTCCTTGTGGTCCATGCTCTGAGTTGTACTATGACTTCTATCCTGAGAGAGGTTATGATGAAGATGTTGATCTTGGGGATGATACCAGATTTATTGAGTTCTATAATTTGGTTTTCATGCAGTATAACAAGACGGAAGATGGATTGCTTGAGCCCTTGAAACAGAAGAATATAGATACTGGTCTTGGTTTGGAACGTATAGCTCAAATCCTTCAGAAGGTTCCAAACAACTACGAGACAGATTTGATATATCCAATCATTGCAAAGATCTCAGAGTTGGCGAATATCTCATATGACTCTGCAAATGACAAGGCAAAGACAAGTTTAAAAGTGATTGCAGATCACATGCGGGCAGTTGTCTATCTCATATCAGATGGTGTTTCTCCTTCAAATATTGGCAGAGGTTATGTGGTTAGGAGGCTAATAAGAAGAGCAGTTCGGAAGGGGAAGTCTCTCGGAATAAATGGGGATATGAATGGTAATCTAAAGGGAGCGTTTTTGCCAGCGGTTGCTGAAAAGGTGATAGAGTTGAGCACTTATATTGATTCAGATGTAAAACTAAAGGCCTCACGCATCATTGAGGAGATTAGGCAAGAAGAACTTCACTTTAAGAAAACTCTGGAAAGAGGAGAAAAGTTACTTGACCAAAAGCTTAACGATGCATTGTCAATTGCTGATAAAACTAAGGATACGCCTTATCTGGATGGAAAAGATGCGTTTCTTCTTTATGACACATTTGGCTTTCCTGTGGAGATAACTGCAGAAGTTGCTGAAGAACGTGGAGTCAGTATAGATATGAATGGTTTTGAAGTGGAAATGGAGAATCAAAGACGTCAATCTCAAGCTGCTCACAATGTTGTAAAACTGACAGTTGAAGACGATGCTGACATGACGAAAAATATTGCAGACACTGAGTTCCTTGGATATGACAGTCTCTCTGCTCGTGCTGTTGTGAAAAGTCTTTTGGTGAATGGGAAGCCTGTGATAAGGGTTTCTGAAGGCAGTGAAGTAGAGGTTCTGCTGGACAGAACTCCGTTCTATGCTGAATCAGGAGGTCAAATTGCAGATCATGGTTTTCTTTATGTTAGCAGTGATGGGAACCAAGAGAAAGCTGTTGTTGAGGTAAGTGATGTGCAGAAGTCTCTTAAAATTTTTGTTCACAAGGGCACTGTAAAAAGTGGAGCTCTAGAAGTTGGCAAGGAGGTGGAAGCAGCAGTAGATGCAGACTTGAGGCAACGAGCGAAGGTTCACCATACCGCCACTCATTTGCTCCAATCGGCACTTAAAAAAGTAGTAGGACAAGAAACATCACAGGCTGGTTCATTAGTAGCTTTTGACCGCCTCAGATTCGATTTCAATTTTAATCGGTCCCTGCATGATAATGAGCTTGAGGAAATCGAATGCCTGATCAATAGGTGGATTGGGGATGCTACACGTCTTGAAACAAAAGTCCTTCCTCTTGCTGATGCAAAACGTGCTGGAGCCATCGCAATGTTTGGGGAAAAATATGATGAAAACGAGGTTCGTGTAGTAGAAGTTCCTGGTGTCTCCATGGAACTTTGTGGTGGCACTCATGTTGGCAATACTGCAGAAATACGAGCCTTCAAGATTATCTCAGAACAGGGCATTGCATCTGGAATCCGGCGTATAGAAGCGGTTGCAGGTGAAGCATTCATTGAATACATAAACTCACGGGATTCTCAAATGACACGTCTATGCTCGACTCTCAAGGTGAAAGCAGAGGATGTTACAAACAGAGTGGAGAATCTTCTAGAGGAACTACGTGCTGCTAGAAAAGAAGCCTCCGACTTGCGTTCAAAAGCAGCTGTCTATAAAGCATCTGTCATATCGAACAAAGCATTTACTGTAGGAACTTCACAGACTATAAGAGTGCTCGTTGAGTCGATGGATGACACCGATGCTGACTCATTAAAGAGTGCAGCTGAGCATTTGATAAGCACATTGGAAGATCCAGTCGCTGTGGTACTAGGATCATCTCCAGAAAAAGACAAGGTTAGTTTAGTTGCTGCATTTAGTCCTGGAGTAGTCTCCCTAGGTGTTCAAGCAGGGAAATTCATTGGCCCCATAGCTAAGCTGTGTGGCGGAGGAGGTGGTGGAAAGCCCAATTTTGCTCAGGCAGGCGGCAGAAAGCCTGAAAATCTCCCAAGTGCCTTAGAGAAAGCTCGGGAAGATCTCGTGGCAACTCTATCCGAAAAGCTAGGGTGAAGCACAAACTTCAAAAGTGATCTGCGTGTACAGAGAGAAGGAAGAGCACATTGCTTGATTCTAGACAAGTGTATTGCATGTATAGATGATAGACATTAAAGATATTTGATGTATCTAGTTTTTGAACATTAAATGATCAATGACATTTCTTTTAATGAATGAGGGACTATGTTTCGATTTGCTTTACTCATTGAACGTCGTCTCAATGGTTTTGGACGTATTACAAAAAGTGAATCTGTGTATATTTAACATAGCATTATAGCAAGTTATGAAGAGAATGTCATGCTTTCTGTGCGCGTAGAGAGCTTTTGACGAGGGTGAGATGAAGTTGTAGGCAGTTGAGACGACCGCGTTTTGACTCTGTTGGATTGTGTCACCGGAGTTACTGATGCGGTGATATTATTGCATTTGTGGTTGAAGTTTCGGTTCCTGTACTCTTTTCTTTTTTCCCAAATTCAGGGTCCGGTTCAATTT
CDS Sequence
Protein Sequence