Gene Details:

  • Gene ID: AT5G23020
  • Gene Symbol: IMS2, MAM-L, MAM3
  • Gene Name: 2-isopropylmalate synthase 2, METHYLTHIOALKYMALATE SYNTHASE-LIKE
  • Description: 2-isopropylmalate synthase 2;(source:Araport11)
  • TAIR Accession: locus:2178317
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
  • PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
  • PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
  • PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

  • GO:0019761  — acts upstream of or within — glucosinolate biosynthetic process
  • GO:0009098  — acts upstream of or within — leucine biosynthetic process
  • GO:0009507  — located in — chloroplast
  • GO:0003852  — enables — 2-isopropylmalate synthase activity
  • GO:0000215  — enables — 2-(2-methylthio)ethylmalate synthase activity

Germplasm Phenotype:

  • gsm2-1  — lacking C6, C7 and C8 aliphatic glucosinolates in the leaves
  • gsm2-2  — recessive phenotype consisting of a 90% reduction in C8 glucosinolates. also reductions in the levels of C7 glucosinolates

Literature:

Sequence:

cDNA Sequence
  • >AT5G23020.1 CTCCACCTCATTGCAAAACAATTTCCCCACTATCTATCCTCCATAATATAGTATTCTTCTTTTCTCTCCTACTTTCTCTATAGTAATGGCTTCGTTACTTCTCACATCGTCGAGTATGATAACCACTAGCTGTCGCTCCATGGTTCTCCGGTCAGGGTTACCCATCGGATCTTCTTTTCCCTCTCTTCGCCTGACCCGTCCATACGACAAGGCGACTCTGTTCGTCTCATGTTGCTCCGCTGAGTCCAAAAAGGTGGCAACTAGTGCTACTGATCTCAAACCTATCATGGAACGGAGGCCGGAGTACATTCCGAACAAGCTTCCCCACAAGAACTATGTGCGTGTATTAGACACGACGCTTCGTGACGGTGAACAATCTCCCGGTGCAGCACTTACTCCACCGCAGAAGTTAGAGATTGCCAGGCAGCTAGCTAAACTCCGAGTAGACATCATGGAAGTTGGTTTTCCGGTGTCGTCTGAGGAAGAATTCGAAGCTATTAAAACCATCGCCAAGACCGTGGGGAACGAGGTGGATGAGGAAACCGGTTACGTTCCTGTGATATGCGGCATTGCACGATGCAAAAAGAGAGACATCGAGGCAACTTGGGAGGCACTGAAGTATGCGAAGAGGCCGAGGGTAATGCTATTCACATCTACTAGTGAAATTCACATGAAATATAAGTTGAAAAAGACTAAAGAAGAAGTGATCGAGATGGCCGTGAACAGTGTTAAGTACGCTAAAAGCTTGGGCTTCAAAGACATCCAATTTGGGTGCGAAGATGGCGGCAGGACGGAGAAAGATTTTATATGTAAGATTCTAGGAGAATCGATAAAAGCGGGTGCAACCACGGTGGGGTTTGCGGACACGGTCGGGATCAACATGCCGCAAGAATTCGGAGAACTCGTGGCCTATGTCATAGAAAACACTCCAGGGGCTGATGATATTGTCTTCGCCATTCATTGTCATAACGACCTTGGTGTTGCTACCGCCAACACAATATCCGGTATATGTGCGGGAGCAAGACAAGTCGAAGTGACGATCAACGGAATTGGTGAAAGAAGTGGGAATGCGCCGCTTGAAGAGGTCGTGATGGCTTTGAAATGTCGAGGAGAATCTCTGATGGATGGTGTTTACACAAAAATAGACTCACGCCAAATTATGGCTACAAGCAAGATGGTTCAAGAGCATACCGGCATGTATGTTCAACCACATAAGCCAATAGTTGGAGACAACTGTTTTGTTCATGAGAGCGGCATTCACCAGGATGGAATATTGAAAAATCGAAGTACATATGAGATCTTATCACCAGAAGATGTTGGGATCGTAAAATCTGAAAATTCTGGCATTGTTCTTGGAAAGCTTAGCGGACGTCATGCTGTAAAAGACCGGCTTAAAGAGTTGGGATATGAAATCAGTGATGAGAAATTCAACGACATCTTCTCACGATACAGAGAATTAACGAAGGACAAAAAGAGAATCACAGACGCTGATCTGAAGGCATTAGTGGTGAACGGTGCTGAAATCTCATCAGAAAAATTAAACAGTAAAGGAATTAACGACCTTATGTCAAGCCCTCAGATTTCCGCTGTTGTATAAGTTTGGGAAGACATTGTGTAATTTTGTACTACGATGGTATTAAGTCACTTTTGTTTTACTGTGTTTTGTGTACTATATATACGTACCTTTTGGTTTTTATGTTATCGTTGTAATGAATAAAACAGTATTAATAGGGAGTGTTTTTATTCTATAATTAAACTCTCTTTTTTATAATGATTTTCACCAAAGTATTGGAAATTTAAACAAACATTACCATATTCCATTGAAGATT
CDS Sequence
Protein Sequence