Gene Details:

• Gene ID: AT5G23120
• Gene Symbol: HCF136
• Gene Name: HIGH CHLOROPHYLL FLUORESCENCE 136
• Description: photosystem II stability/assembly factor, chloroplast (HCF136);(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G23120.1     AT5G23120.2

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Germplasm Phenotype:

• hcf136  — Seedling lethal, devoid of photosystem II activity

Function-related keywords:

• root ,  guard cell

Literature:

• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy.   DOI:  10.1074/jbc.M406763200 ;  PMID:  15322131
• Chloroplast research in the genomic age.   DOI:  10.1016/s0168-9525(02)00003-3 ;  PMID:  12493248
• The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses.   DOI:  10.1002/pmic.200500543 ;  PMID:  16502469
• The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature.   DOI:  10.1111/j.1365-313X.2006.02821.x ;  PMID:  16923014
• Oviposition by pierid butterflies triggers defense responses in Arabidopsis.   DOI:  10.1104/pp.106.090837 ;  PMID:  17142483
• An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-8-47 ;  PMID:  18433503
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.   DOI:  10.1104/pp.110.168120 ;  PMID:  21139083
• A proteomic analysis of Arabidopsis thaliana seedling responses to 3-oxo-octanoyl-homoserine lactone, a bacterial quorum-sensing signal.   DOI:  10.1016/j.bbrc.2012.09.044 ;  PMID:  22995300
• A proteomics approach identifies novel proteins involved in gravitropic signal transduction.   DOI:  10.3732/ajb.1200339 ;  PMID:  23281391
• Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation.   DOI:  10.1093/jxb/ert227 ;  PMID:  24064926
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis.   DOI:  10.3389/fpls.2016.00168 ;  PMID:  26909098
• Functional Update of the Auxiliary Proteins PsbW, PsbY, HCF136, PsbN, TerC and ALB3 in Maintenance and Assembly of PSII.   DOI:  10.3389/fpls.2016.00423 ;  PMID:  27092151
• Stable Accumulation of Photosystem II Requires ONE-HELIX PROTEIN1 (OHP1) of the Light Harvesting-Like Family.   DOI:  10.1104/pp.17.01782 ;  PMID:  29438089
• Exploring the Link between Photosystem II Assembly and Translation of the Chloroplast psbA mRNA.   DOI:  10.3390/plants9020152 ;  PMID:  31991763
• Light Signaling-Dependent Regulation of PSII Biogenesis and Functional Maintenance.   DOI:  10.1104/pp.20.00200 ;  PMID:  32439719
• Characterization of the Free and Membrane-Associated Fractions of the Thylakoid Lumen Proteome in Arabidopsis thaliana.   DOI:  10.3390/ijms22158126 ;  PMID:  34360890
• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy.   DOI:  10.1074/jbc.M406763200 ;  PMID:  15322131
• The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses.   DOI:  10.1002/pmic.200500543 ;  PMID:  16502469
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequence: