Gene Details:

• Gene ID: AT5G25060
• Gene Symbol: RRC1
• Gene Name: reduced red-light responses in cry1cry2 background 1
• Description: RNA recognition motif (RRM)-containing protein;(source:Araport11)
• TAIR Accession: locus:2179295
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G25060.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0043170  — acts upstream of or within — macromolecule metabolic process
• GO:0010468  — acts upstream of or within — regulation of gene expression
• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription
• GO:0005634  — located in — nucleus
• GO:0051301  — acts upstream of or within — cell division
• GO:0005515  — enables — protein binding
• GO:0051252  — acts upstream of or within — regulation of RNA metabolic process
• GO:0003723  — enables — RNA binding
• GO:2000026  — acts upstream of or within — regulation of multicellular organismal development
• GO:0043484  — acts upstream of or within — regulation of RNA splicing
• GO:0005634  — is active in — nucleus
• GO:0051254  — acts upstream of or within — positive regulation of RNA metabolic process
• GO:0048589  — acts upstream of or within — developmental growth
• GO:0051641  — acts upstream of or within — cellular localization
• GO:0048507  — acts upstream of or within — meristem development
• GO:0048364  — acts upstream of or within — root development

Function-related keywords:

• root

Literature:

• The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis.   DOI:  10.1111/j.1365-313X.2006.02681.x ;  PMID:  16623895
• The RS domain of Arabidopsis splicing factor RRC1 is required for phytochrome B signal transduction.   DOI:  10.1111/j.1365-313X.2012.04937.x ;  PMID:  22324426
• Systematic identification of functional plant modules through the integration of complementary data sources.   DOI:  10.1104/pp.112.196725 ;  PMID:  22589469
• Deletion of the RS domain of RRC1 impairs phytochrome B signaling in Arabidopsis.   DOI:  10.4161/psb.20854 ;  PMID:  22751357
• SWELLMAP 2, a phyB-Interacting Splicing Factor, Negatively Regulates Seedling Photomorphogenesis in Arabidopsis.   DOI:  10.3389/fpls.2022.836519 ;  PMID:  35222493
• SWAP1-SFPS-RRC1 splicing factor complex modulates pre-mRNA splicing to promote photomorphogenesis in Arabidopsis.   DOI:  10.1073/pnas.2214565119 ;  PMID:  36282917

Sequence: