Gene Details:

• Gene ID: AT5G25620
• Gene Symbol: AtYUC6, YUC6
• Gene Name: YUCCA6
• Description: Flavin-binding monooxygenase family protein;(source:Araport11)
• TAIR Accession: locus:2179434
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G25620.1     AT5G25620.2

Gene Ontology:

• GO:0050660  — enables — flavin adenine dinucleotide binding
• GO:0009851  — involved in — auxin biosynthetic process
• GO:0010262  — acts upstream of or within — somatic embryogenesis
• GO:0009851  — acts upstream of or within — auxin biosynthetic process
• GO:0047134  — enables — protein-disulfide reductase (NAD(P)) activity
• GO:0009723  — acts upstream of or within — response to ethylene
• GO:0009819  — acts upstream of or within — drought recovery
• GO:0004497  — enables — monooxygenase activity
• GO:0010038  — involved in — response to metal ion
• GO:0050661  — enables — NADP binding
• GO:0004499  — enables — N,N-dimethylaniline monooxygenase activity
• GO:0006979  — acts upstream of or within — response to oxidative stress
• GO:0103075  — enables — indole-3-pyruvate monooxygenase activity

Germplasm Phenotype:

• CS67234  — epinastic cotyledons, long hypocotyls, curled rosette leaves, increased apical dominance, tall inflorescences, twisted cauline leaves, enlarged seeds. All phenotypes are caused by a gain-of-function yucca6-1D mutation

Literature:

• Auxin synthesized by the YUCCA flavin monooxygenases is essential for embryogenesis and leaf formation in Arabidopsis.   DOI:  10.1105/tpc.107.053009 ;  PMID:  17704214
• yucca6, a dominant mutation in Arabidopsis, affects auxin accumulation and auxin-related phenotypes.   DOI:  10.1104/pp.107.104935 ;  PMID:  17885085
• Auxin regulates Arabidopsis anther dehiscence, pollen maturation, and filament elongation.   DOI:  10.1105/tpc.107.057570 ;  PMID:  18628351
• Auxins reverse plant male sterility caused by high temperatures.   DOI:  10.1073/pnas.1000869107 ;  PMID:  20421476
• YUCCA6 over-expression demonstrates auxin function in delaying leaf senescence in Arabidopsis thaliana.   DOI:  10.1093/jxb/err094 ;  PMID:  21511905
• Isolation and characterization of two YUCCA flavin monooxygenase genes from cultivated strawberry (Fragaria × ananassa Duch.).   DOI:  10.1007/s00299-012-1258-4 ;  PMID:  22491872
• SCI1 is a component of the auxin-dependent control of cell proliferation in Arabidopsis upper pistil.   DOI:  10.1016/j.plantsci.2014.09.003 ;  PMID:  25443839
• The importance of localized auxin production for morphogenesis of reproductive organs and embryos in Arabidopsis.   DOI:  10.1093/jxb/erv256 ;  PMID:  26019252
• YUCCA-mediated auxin biogenesis is required for cell fate transition occurring during de novo root organogenesis in Arabidopsis.   DOI:  10.1093/jxb/erw213 ;  PMID:  27255928
• The Thiol Reductase Activity of YUCCA6 Mediates Delayed Leaf Senescence by Regulating Genes Involved in Auxin Redistribution.   DOI:  10.3389/fpls.2016.00626 ;  PMID:  27242830
• Ethylene and auxin interaction in the control of adventitious rooting in Arabidopsis thaliana.   DOI:  10.1093/jxb/erw415 ;  PMID:  27831474
• Type-B ARABIDOPSIS RESPONSE REGULATORs Specify the Shoot Stem Cell Niche by Dual Regulation of WUSCHEL.   DOI:  10.1105/tpc.16.00640 ;  PMID:  28576846
• An Improved Recombineering Toolset for Plants.   DOI:  10.1105/tpc.19.00431 ;  PMID:  31666295
• CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2 modulates auxin homeostasis and signaling.   DOI:  10.1093/plphys/kiab332 ;  PMID:  34618044
• Phytochrome-interacting factors orchestrate hypocotyl adventitious root initiation in Arabidopsis.   DOI:  10.1242/dev.200362 ;  PMID:  35502748
• Endogenous auxin maintains embryonic cell identity and promotes somatic embryo development in Arabidopsis.   DOI:  10.1111/tpj.16024 ;  PMID:  36345646
• Local phytochrome signalling limits root growth in light by repressing auxin biosynthesis.   DOI:  10.1093/jxb/erad163 ;  PMID:  37140032

Sequence: