Gene Details:
- Gene ID: AT5G37720
- Gene Symbol: ALY4, AtALY4, DIP2
- Gene Name: interacting with DNA-binding domain of Zn-finger PARP 1
- Description: ALWAYS EARLY 4;(source:Araport11)
- TAIR Accession: locus:2151779
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0005654 — located in — nucleoplasm
- GO:0006406 — involved in — mRNA export from nucleus
- GO:0003729 — enables — mRNA binding
- GO:0005634 — is active in — nucleus
- GO:0005730 — located in — nucleolus
Literature:
- Relocalization of nuclear ALY proteins to the cytoplasm by the tomato bushy stunt virus P19 pathogenicity protein. DOI: 10.1104/pp.104.046086 ; PMID: 15299117
- The heavy metal hyperaccumulator Thlaspi caerulescens expresses many species-specific genes, as identified by comparative expressed sequence tag analysis. DOI: 10.1111/j.1469-8137.2006.01714.x ; PMID: 16684236
- Light has a specific role in modulating Arabidopsis gene expression at low temperature. DOI: 10.1186/1471-2229-8-13 ; PMID: 18230142
- Dynamic behavior of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia. DOI: 10.1105/tpc.108.060434 ; PMID: 19435936
- ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development. DOI: 10.1104/pp.18.00173 ; PMID: 29540591
- The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export. DOI: 10.1104/pp.18.01476 ; PMID: 30700540
- The RNA Export Factor ALY1 Enables Genome-Wide RNA-Directed DNA Methylation. DOI: 10.1105/tpc.18.00624 ; PMID: 30814259
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Jasmonate induced alternative splicing responses in Arabidopsis. DOI: 10.1002/pld3.245 ; PMID: 32875268
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
Sequence:
cDNA Sequence
- >AT5G37720.2 TGGCAATCAAATTCTATTTGAATTTCGAAATTTCGATAGAGACGAAAATAACCTTCTAAGTGTTCTATAATTACGAAATTGTCCTTACCCTAGACTTAAACCCCATATTTTCTTCCTCCATCCCTTCTCTGCTAAATTCTGTCTGATCTAAAAAATCAACGAACACAAAACTCATCAAAGCTCCTCAAAACCCTAAACACAGTCTCTCCATCTTCTTCAATCTCTCTCTCGTTCGGATTCTCATCTCTTCTTCTGGTTTCAGATTGAGTCTTGTTACTGTGTTTCATAAGACTATTGAAGTTAAGATGTCTGGAGCATTGAATATGACTCTTGATGAGATTGTTAAGAGGGGTAAAACTGCAAGGTCTGGGGGAAGAGGGATTTCTCGTGGGCGTGGTCGTGGACGTGGTGGTGGTGGAAGAGGAGCTGGACCTGCTAGAAGAGGTCCTCTTGCTGTGAATGCTCGTCCATCATCTTTCACCATTAACAAGCCTGTCCGTAGGGTCAGGAGCTTGCCATGGCAAAGCGGTTTGTTTGAAGATGGCCTAAGAGCTGCCGGGGCATCAGGAGTTGAAGTTGGAACCAGGCTCCATGTTACAAATCTGGACCAGGGTGTGACAAATGAAGATATAAGGGAACTCTTCTCTGAGATTGGGGAGGTAGAGCGTTATGCGATTCATTATGACAAAAATGGGCGTCCAAGTGGCACAGCTGAAGTGGTGTATCCAAGAAGAAGTGATGCATTTCAAGCTCTGAAGAAATATAACAATGTGCTATTGGATGGAAGGCCAATGAGACTTGAGATTTTGGGTGGCAACAATTCTTCCGAGGCTCCTTTATCTGGTCGTGTGAATGTGAATGTCACTGGACTCAATGGAAGGCTGAAGAGGACGGTTGTTATCCAAGTTAGAGGTGGGAGAGGAGGAAGAGGTCCAGCTCCTACTGTCAGTCGCCGCCTTCCAATTCATAACCAGCAGGGAGGAGGGATGAGAGGAGGAAGAGGCGGGTTTCGTGCTAGAGGGCGTGGTAATGGTGGCCGTGGTCGTGGTGGTGGAAGAGGAAATGGAAAGAAGCCAGTGGAGAAGTCAGCTGCTGATCTTGACAAAGATCTTGAGAGCTATCACGCTGATGCCATGAACACCTCTTAAATCGTGTTGTGTTGTTCTTACTAAACTAGTTTCAGATGAAATCATGCTTCTCTTTTTTTCATGCTCTTCGTTGGTTTTGTTGGATGTTGATTGTAAAGTAAATGGAAGCCTTTTAGAATCTAGCTGTCTTAAATTTTCTTTTATATAAAGAGTGATTTAAAGTTACC
- >AT5G37720.1 TGGCAATCAAATTCTATTTGAATTTCGAAATTTCGATAGAGACGAAAATAACCTTCTAAGTGTTCTATAATTACGAAATTGTCCTTACCCTAGACTTAAACCCCATATTTTCTTCCTCCATCCCTTCTCTGCTAAATTCTGTCTGATCTAAAAAATCAACGAACACAAAACTCATCAAAGCTCCTCAAAACCCTAAACACAGTCTCTCCATCTTCTTCAATCTCTCTCTCGTTCGGATTCTCATCTCTTCTTCTGGTTTCAGATTGAGTCTTGTTACTGTGTTTCATAAGACTATTGAAGTTAAGATGTCTGGAGCATTGAATATGACTCTTGATGAGATTGTTAAGAGGGGTAAAACTGCAAGGTCTGGGGGAAGAGGGATTTCTCGTGGGCGTGGTCGTGGACGTGGTGGTGGTGGAAGAGGAGCTGGACCTGCTAGAAGAGGTCCTCTTGCTGTGAATGCTCGTCCATCATCTTTCACCATTAACAAGCCTGTCCGTAGGGTCAGGAGCTTGCCATGGCAAAGCGGTTTGTTTGAAGATGGCCTAAGAGCTGCCGGGGCATCAGGAGTTGAAGTTGGAACCAGGCTCCATGTTACAAATCTGGACCAGGGTGTGACAAATGAAGATATAAGGGAACTCTTCTCTGAGATTGGGGAGGTAGAGCGTTATGCGATTCATTATGACAAAAATGGGCGTCCAAGTGGCACAGCTGAAGTGGTGTATCCAAGAAGAAGTGATGCATTTCAAGCTCTGAAGAAATATAACAATGTGCTATTGGATGGAAGGCCAATGAGACTTGAGATTTTGGGTGGCAACAATTCTTCCGAGGCTCCTTTATCTGGTCGTGTGAATGTGAATGTCACTGGACTCAATGGAAGGCTGAAGAGGACGGTTGTTATCCAAGTTAGAGGTGGGAGAGGAGGAAGAGGTCCAGCTCCTACTGTCAGTCGCCGCCTTCCAATTCATAACCAGCAGGGAGGAGGGATGAGAGGAGGAAGAGGCGGGTTTCGTGCTAGAGGGCGTGGTAATGGTGGCCGTGGTCGTGGTGGTGGAAGAGGAAATGGAAAGAAGCCAGTGGAGAAGTCAGCTGCTGATCTTGACAAAGATCTTGAGAGCTATCACGCTGATGCCATGAACACCTCTTAAATCGTGTTGTGTTGTTCTTACTAAACTAGTTTCAGATGAAATCATGCTTCTCTTTTTTTCATGCTCTTCGTTGGTTTTGTTGGATGTTGATTGTAAAGTAAATGGAAGCCTTTTAGAATCTAGCTGTCTTAAATTTTCTTTTATATAAAGAGTGATTTAAAGTTACC
CDS Sequence
Protein Sequence