Gene Details:
- Gene ID: AT5G42780
- Gene Symbol: AtHB27, HB27, RHD1, ZHD13
- Gene Name: homeobox protein 27, homeobox protein 27, ROS1-associated homeodomain protein 1, ZINC FINGER HOMEODOMAIN 13
- Description: homeobox protein 27;(source:Araport11)
- TAIR Accession: locus:2165502
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Gene Ontology:
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0005634 — is active in — nucleus
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0003677 — enables — DNA binding
- GO:0042803 — enables — protein homodimerization activity
- GO:0003700 — enables — DNA-binding transcription factor activity
Function-related keywords:
Literature:
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- The Arabidopsis zinc finger-homeodomain genes encode proteins with unique biochemical properties that are coordinately expressed during floral development. DOI: 10.1104/pp.105.070565 ; PMID: 16428600
- Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress. DOI: 10.1111/j.1365-313X.2006.02889.x ; PMID: 17059409
- Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila. DOI: 10.1186/1471-2229-8-115 ; PMID: 19014467
- Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor in Arabidopsis. DOI: 10.1074/jbc.M110.167692 ; PMID: 21059647
- A novel protein complex that regulates active DNA demethylation in Arabidopsis. DOI: 10.1111/jipb.13045 ; PMID: 33615694
Sequence:
cDNA Sequence
- >AT5G42780.1 ACTGGTCACTAGTCACTATCAAGCAGCCTAAAAAGTATCGACTCTTCTTTATCAAAAAAGTTTACACAAACACTTTCTCTCCACTGAACTCATTTTCTCTCTTCTTCTTCATCATCATCATCAATGGATGAGATAAAACCAAAGAAAGAAGAGAATTCCAAACGACGTCGTAACGTCAAACCCATTTGCCGTGAAACTGGAGACCACGTCCATTATCTTCCAACATGCAAAACCAAGCCCAAACCCACGCGTACTCATCACGCGCCACCACCGATCCTCGACTCAATCTTCAAAGTCACTCACAAGCCACACTACTACGAATGCAGGAAGAATCACGCCGCTGATATCGGAACCACCGCTTACGACGGCTGCGGCGAGTTTGTTAGCTCCACCGGTGAAGAAGATTCTTTAAACTGCGCCGCATGTGGCTGTCACCGTAACTTCCACCGTGAAGAGTTAATCCCGGAGAACGGCGGCGTTACTGAGACGGTTCTTGAAGTTCTCAAGATTTCATCGTGTCAGTTTCGTCGGATCTTTTGCTCACCTTACGGCGGTGGAAAAAGCGAAGGAAAGAAGAAGAAGAAGGAGAAGGAGAGTTATGGAGGGGATCCGATAATTAAAGATCGATTCGGCGGTGCGGAGGAGGAGGAGGGGATAGTGAAGAGGTTGAAAACGAAGTTCACGGCGGAGCAAACGGAGAAAATGAGGGATTATGCGGAGAAGCTTCGGTGGAAGGTGAGACCTGAGAGGCAGGAGGAGGTTGAAGAGTTTTGTGTAGAGATTGGAGTGAATCGGAAGAATTTTAGGATTTGGATGAATAATCACAAGGATAAAATTATAATTGATGAATGATTATTTACCAAACTTAATTGTGTTACTTTTCTTTTCATTCTACTTTGTTTTAATTTGTGTTTGATTTAGTGTAATGTATAAATAACAAGCTCATTATTGGCTAAAACCAATTGTGGAGAAGGATTTGCCACAACCTTCGTAATCAATAGTTTTAATGCAAGAAGTAAGTAATATTTCGTTTGGATTTC
CDS Sequence
Protein Sequence