Gene Details:
- Gene ID: AT5G42940
- Gene Symbol: CTL06
- Gene Name:
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- NAC transcription factors ATAF1 and ANAC055 affect the heat stress response in Arabidopsis. DOI: 10.1038/s41598-022-14429-x ; PMID: 35787631
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequence:
cDNA Sequence
- >AT5G42940.1 AAAATCTTTACACATTGAATTATTAGTTTTTGTTTATTCGTTGATTTAGGCATTTAGCAATTCAATTCAGTCTTTGGAAACTGTTCTTATGACTGACCCTTTTTAACTTTTTGATTCAATTTCCTTAAAATATTAGTTTTTATTTTGGGTTATATGGTAAATTACACATTGCCGTCTCGTCCTAATAATCCTCTTTTCTGTTCCCATTTGTGTTGTTGTGCTTTGCTTCCTTCCTTTTTCCTCATTCTCTCTTCTTCTCCTTCTTCCTTCTCCTCCACCACAAAGCGGTAGGTTTCTCTCTTCAACAATCGTCTCCCCATTAGGCACATTGTTGAGGGCAGGGTAGTCTCGTGAGTTCTCTTCTCCTGAGTGTAACTGTGGTTAAAAGCTTAGCCAAGATGCAGGGGGAGAGGGCCAGTCTTGGCTATTTATCAGAGGCCTTGAACTTTGAGCATGGTTCTTCTTCAAGTAATGGTGTGATAGATCATTGGGAGAATATTCACAGTCTTGGTGATAATGACTTGCAGGATTACATGATTGCAAATTCTGAATCAAATACTTCGCTTGCAAACTCAGTTTATCACGAGCAACAGGGTTTACGCAGATTTAGCCTTGGTGAGGCTAGCTCTAGTGGCACGAAGGATGAAGCTTCCAGTCACAATGAGCAACGAATGGAAACAAGATGCTTTGACGGACGAGGAAATGAAATAATTGATTTAGACCCAGTGTTTGCGCAGCCATCAGGCACAAATCAACCTGTTCAGAATGTCAATCTGAATGCAGAGTATATAGAAATTCACGAGGATATTAATCCATATAGAGGTCGGTCTGGCTTCATAGAAGCTAATGGACCAGGGACCAGGGTCTCACAACCTGGCAGATCTTTTGAAGAGAACGGTGTTGGAACAGGTTCTTCTGTAGAGGGACGTCGTGCATCCTGCAAAAGAAAAGCTCTTGAAGGCAGTATTAGTCAATCTTCTTCAGGAGGTTATCATGATTTCCAGCGTGGAGAAAGCAGTTCGTGGACCCCAGGTTCTACGGTTTTTAGGCCAGGAAATGGTTTAAACATATCTGGCTCCCTTGACAATGGACCAAGAGGAATGGTCTCCGGTACTGTACCAAATTTTCCTGTTTCTGCACCAAATTTTCCTGTTTCTGCCATTGCAGAGAGCTCCAGTAGAAATATATGCGTCAGGAGTAATCCCTCAGATCATCAAGAAACTGTAAACCCATCTACCTTTGCTGCGGGAACTGTTGTCAGGCGGCCTGTCCCTCCATCCCAGTTGAACTTGTCAAGACACTTACCAGCAGATCAGCATTCATTGGACTTGAGACCTGGACAGTCTTTTGTCGTTTCTCGTAACCCAAATTCTACTCCTGTGAGCATACCACCTGGTTCAAGGACTATGCTACCACCATTTCGGTGGACTGGGAGCTCACTAGTGGGTGGAACATCGAACTCTACTGCGCCCGTTGAGAGAAATCTTCATCTAGATGAAACCAGGTCAAGAAGCATACCCGGGAATACTCTTGAGATTCCCATGTTTGCAGCTCCTGAGGTAGGAAATTTTGCCCGTAGTCAGAGTAGCAGAAATGTAACAAATGGAAACCTGAATAGTGCATCATCAGTGTCCAGGACAGGCTCAACAACAAGTGTTCCACCACCACCACCACCATCTTCTAATCTAGCGTGGACTTCTTACCAGAATTCACCACATTATCAAAGAAGAAGGACTGAAAGGTCTGAACTTGCACGTAGGTCCTTGCTTTCTTCCCTTGCAGCAGATGCTACAAACCAGAGATCTGGTGATCATCCAACACTTCGTTCGTTGGCCCCTCCTGCCTCTTCGGATGGGCTTGTGCTTCAGCCTGGTGGTGATAATAGTCAGATGCATAATCGGGCTTACTCGAGAGCAGGTCCGTTGTTTGATAGGCAAGGGGATAGTGTGGTTGGTATTCCTCATCCTTTGCGGGCCTTGGCAGCTGCAAGCAGAGGAAGAAGCAGACTTATGGTGTCCCAGATGCAGAATGTCTTGGATGTCATGCGTAGGGATGCTAATAATAACAACTTGCGGCTTGAGGACGTTATGCTTCTAAATCACTCAGTACTATTTGATGGGGCTACTGGTCATGACCGGTATAGAGACATGCGACTTGATGTGGACAACATGTCATATGAGGAATTGTTGGCACTAGAAGAGCGGATTGGAGATGTTTGTACCGGTGTAAACGAGGAAACCATATCAAACCGGTTAAAGCAACGAAAATACAAAAGCAACACAAAATCTCCACAAGATGCAGAGCCATGCTGTGTTTGTCAGGAGGAATACACCGAAGGAGAAGACATGGGGACACTAGAATGTGGGCATGAATTCCATAGCCAATGCATTAAAGAATGGCTGAAACAGAAGAATCTTTGCCCAATCTGCAAGACTACAGGCTTGAACACCGCGAAGAAGCGGAGGATAGCATGATGATTTCTCGAAAGAGCTTTTTTTTTTTCTTAACTATTCAATTTTATAATCAAAAATGAAAGAAACAGAAGGTACCCTCAAGCCCCCACACCATTGCAGAGCCAGGCAAGTTTGTCCCCAATTTTTTTTAAAAAAAAGATAGAATTTGTTCGTATTTATAATCTGAGTATGAAAGATGGAAAGATTTGGATTGAAGGGAAAAGATAAAGGGTGGTAGGGAAATGTTGTTTTTTTCTTTTATGGATTTGTTTGGATAATTTAATTTTACCCATTGTCAATTAAGTTTATGAATCCTTTGAAAGAAGCAGGAAGTTGAATCA
- >AT5G42940.2 AAAATCTTTACACATTGAATTATTAGTTTTTGTTTATTCGTTGATTTAGGCATTTAGCAATTCAATTCAGTCTTTGGAAACTGTTCTTATGACTGACCCTTTTTAACTTTTTGATTCAATTTCCTTAAAATATTAGTTTTTATTTTGGGTTATATGGTAAATTACACATTGCCGTCTCGTCCTAATAATCCTCTTTTCTGTTCCCATTTGTGTTGTTGTGCTTTGCTTCCTTCCTTTTTCCTCATTCTCTCTTCTTCTCCTTCTTCCTTCTCCTCCACCACAAAGCGGTAGGTTTCTCTCTTCAACAATCGTCTCCCCATTAGGCACATTGTTGAGGGCAGGGTAGTCTCGTGAGTTCTCTTCTCCTGAGTGTAACTGTGGTTAAAAGCTTAGCCAAGATGCAGGGGGAGAGGGCCAGTCTTGGCTATTTATCAGAGGCCTTGAACTTTGAGCATGGTTCTTCTTCAAGTAATGGTGTGATAGATCATTGGGAGAATATTCACAGTCTTGGTGATAATGACTTGCAGGATTACATGATTGCAAATTCTGAATCAAATACTTCGCTTGCAAACTCAGTTTATCACGAGCAACAGGGTTTACGCAGATTTAGCCTTGGTGAGGCTAGCTCTAGTGGCACGAAGGATGAAGCTTCCAGTCACAATGAGCAACGAATGGAAACAAGATGCTTTGACGGACGAGGAAATGAAATAATTGATTTAGACCCAGTGTTTGCGCAGCCATCAGGCACAAATCAACCTGTTCAGAATGTCAATCTGAATGCAGAGTATATAGAAATTCACGAGGATATTAATCCATATAGAGGTCGGTCTGGCTTCATAGAAGCTAATGGACCAGGGACCAGGGTCTCACAACCTGGCAGATCTTTTGAAGAGAACGGTGTTGGAACAGGTTCTTCTGTAGAGGGACGTCGTGCATCCTGCAAAAGAAAAGCTCTTGAAGGCAGTATTAGTCAATCTTCTTCAGGAGGTTATCATGATTTCCAGCGTGGAGAAAGCAGTTCGTGGACCCCAGGTTCTACGGTTTTTAGGCCAGGAAATGGTTTAAACATATCTGGCTCCCTTGACAATGGACCAAGAGGAATGGTCTCCGGTACTGTACCAAATTTTCCTGTTTCTGCACCAAATTTTCCTGTTTCTGCCATTGCAGAGAGCTCCAGTAGAAATATATGCGTCAGGAGTAATCCCTCAGATCATCAAGAAACTGTAAACCCATCTACCTTTGCTGCGGGAACTGTTGTCAGGCGGCCTGTCCCTCCATCCCAGTTGAACTTGTCAAGACACTTACCAGCAGATCAGCATTCATTGGACTTGAGACCTGGACAGTCTTTTGTCGTTTCTCGTAACCCAAATTCTACTCCTGTGAGCATACCACCTGGTTCAAGGACTATGCTACCACCATTTCGGTGGACTGGGAGCTCACTAGTGGGTGGAACATCGAACTCTACTGCGCCCGTTGAGAGAAATCTTCATCTAGATGAAACCAGGTCAAGAAGCATACCCGGGAATACTCTTGAGATTCCCATGTTTGCAGCTCCTGAGGTAGGAAATTTTGCCCGTAGTCAGAGTAGCAGAAATGTAACAAATGGAAACCTGAATAGTGCATCATCAGTGTCCAGGACAGGCTCAACAACAAGTGTTCCACCACCACCACCACCATCTTCTAATCTAGCGTGGACTTCTTACCAGAATTCACCACATTATCAAAGAAGAAGGACTGAAAGGTCTGAACTTGCACGTAGGTCCTTGCTTTCTTCCCTTGCAGCAGATGCTACAAACCAGAGATCTGGTGATCATCCAACACTTCGTTCGTTGGCCCCTCCTGCCTCTTCGGATGGGCTTGTGCTTCAGCCTGGTGGTGATAATAGTCAGATGCATAATCGGGCTTACTCGAGAGCAGGTCCGTTGTTTGATAGGCAAGGGGATAGTGTGGTTGGTATTCCTCATCCTTTGCGGGCCTTGGCAGCTGCAAGCAGAGGAAGAAGCAGACTTATGGTGTCCCAGATGCAGAATGTCTTGGATGTCATGCGTAGGGATGCTAATAATAACAACTTGCGGCTTGAGGACGTTATGCTTCTAAATCACTCAGTACTATTTGATGGGGCTACTGGTCATGACCGGTATAGAGACATGCGACTTGATGTGGACAACATGTCATATGAGGAATTGTTGGCACTAGAAGAGCGGATTGGAGATGTTTGTACCGGTGTAAACGAGGAAACCATATCAAACCGGTTAAAGCAACGAAAATACAAAAGCAACACAAAATCTCCACAAGATGCAGAGCCATGCTGTGTTTGTCAGGAGGAATACACCGAAGGAGAAGACATGGGGACACTAGAATGTGGGCATGAATTCCATAGCCAATGCATTAAAGAATGGCTGAAACAGAAGAATCTTTGCCCAATCTGCAAGACTACAGGCTTGAACACCGCGAAGAAGCGGAGGATAGCATGATGATTTCTCGAAAGAGCTTTTTTTTTTTCTTAACTATTCAATTTTATAATCAAAAATGAAAGAAACAGAAGGTACCCTCAAGCCCCCACACCATTGCAGAGCCAGGCAAGTTTGTCCCCAATTTTTTTTAAAAAAAAGATAGAATTTGTTCGTATTTATAATCTGAGTATGAAAGATGGAAAGATTTGGATTGAAGGGAAAAGATAAAGGGTGGTAGGGAAATGTTGTTTTTTTCTTTTATGGATTTGTTTGGATAATTTAATTTTACCCATTGTCAATTAAGTTTATGAATCCTTTGAAAGAAGCAGGAAGTTGAATCA
CDS Sequence
Protein Sequence