Gene Details:

• Gene ID: AT5G43990
• Gene Symbol: SDG18, SUVR2
• Gene Name: SET DOMAIN PROTEIN 18
• Description: SET-domain containing protein lysine methyltransferase family protein;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G43990.1     AT5G43990.2     AT5G43990.3     AT5G43990.4     AT5G43990.5     AT5G43990.7     AT5G43990.6     AT5G43990.11     AT5G43990.10     AT5G43990.14     AT5G43990.9     AT5G43990.8     AT5G43990.13     AT5G43990.12     AT5G43990.17     AT5G43990.15     AT5G43990.16

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Function-related keywords:

• root

Literature:

• Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots.   DOI:  10.1104/pp.102.013722 ;  PMID:  12805620
• Plants contain a high number of proteins showing sequence similarity to the animal SUV39H family of histone methyltransferases.   DOI:  10.1196/annals.1329.077 ;  PMID:  15659850
• Transcriptional profile of the Arabidopsis root quiescent center.   DOI:  10.1105/tpc.105.031724 ;  PMID:  15937229
• A transcriptome-based characterization of habituation in plant tissue culture.   DOI:  10.1104/pp.105.076059 ;  PMID:  16489130
• Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.   DOI:  10.1016/j.cell.2012.10.054 ;  PMID:  23313553
• The arabidopsis histone methyltransferase SUVR4 binds ubiquitin via a domain with a four-helix bundle structure.   DOI:  10.1021/bi401436h ;  PMID:  24625295
• SNF2 chromatin remodeler-family proteins FRG1 and -2 are required for RNA-directed DNA methylation.   DOI:  10.1073/pnas.1420515111 ;  PMID:  25425661
• SUVR2 is involved in transcriptional gene silencing by associating with SNF2-related chromatin-remodeling proteins in Arabidopsis.   DOI:  10.1038/cr.2014.156 ;  PMID:  25420628
• Angiosperms Are Unique among Land Plant Lineages in the Occurrence of Key Genes in the RNA-Directed DNA Methylation (RdDM) Pathway.   DOI:  10.1093/gbe/evv171 ;  PMID:  26338185
• RETINOBLASTOMA-RELATED interactions with key factors of the RNA-directed DNA methylation (RdDM) pathway and its influence on root development.   DOI:  10.1007/s00425-023-04135-x ;  PMID:  37120771
• LHP1, the Arabidopsis homologue of HETEROCHROMATIN PROTEIN1, is required for epigenetic silencing of FLC.   DOI:  10.1073/pnas.0507427103 ;  PMID:  16549797
• The Arabidopsis SUVR4 protein is a nucleolar histone methyltransferase with preference for monomethylated H3K9.   DOI:  10.1093/nar/gkl687 ;  PMID:  17020925
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• LHP1, the Arabidopsis homologue of HETEROCHROMATIN PROTEIN1, is required for epigenetic silencing of FLC.   DOI:  10.1073/pnas.0507427103 ;  PMID:  16549797
• The Arabidopsis SUVR4 protein is a nucleolar histone methyltransferase with preference for monomethylated H3K9.   DOI:  10.1093/nar/gkl687 ;  PMID:  17020925
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• LHP1, the Arabidopsis homologue of HETEROCHROMATIN PROTEIN1, is required for epigenetic silencing of FLC.   DOI:  10.1073/pnas.0507427103 ;  PMID:  16549797
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• LHP1, the Arabidopsis homologue of HETEROCHROMATIN PROTEIN1, is required for epigenetic silencing of FLC.   DOI:  10.1073/pnas.0507427103 ;  PMID:  16549797
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481

Sequence: