Gene Details:

Functional Descriptions:

  • Collectively, these results confirmed that the candidate gene BnaA09g48250D in the cqOC-A9-9-2 interval, which shows structural variation between N53-2 and Ken-C8, is involved in SOC regulation.
  • Overexpression and knockout of BnaA09g48250D led to significant increases and decreases in SOC, respectively, in the transgenic lines.
  • The candidate gene BnaA09g48250D, which showed structural variation in a QTL/AGR on chrA09, was identified by fine-mapping of a KN double-haploid population derived from hybridization of N53-2 and Ken-C8. Overexpression and knockout of BnaA09g48250D led to significant increases and decreases in SOC, respectively, in the transgenic lines.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >BnaA09g48250D
    ATGGTGAGTCTATTTTCGTCAAGGAAGAGATCGAGGAAAGAAAGAAAGAACCCTTATTCAGATCTCGGACTCGAAAAGTTCTCTGCACTTCTATCCGAGCTAGACGAGAAGAGACAAAGCATTTACGCAACGAGGGTCGACTCAGATGGGCCGCCACTTGTTCGGTTTGTGTTCAAAAGCTCGGGAGAGTGCGTCCCTATCATGATCAAGACAAAGAAGGTAACCAAGAAGAAGGATTCTCAATATGATTTAAAGGTCAAGATCGAAACAAAAGTGGAAGAGGAAAATGAAACAAAGAAAACAGAGTTGGTAACAGAGCAGAAACAGAGCTGCGTATTGAATGAGAATCTGAAGAAGATTTCAAGACCGAAGCATTTTTTACCCGTGACAACAATCTTGGTTCTAATCTTCTTCGTGTTCTTTGGACGAACAGTATCGATCATGTGCACTTGTATCGTTTGGTACTTGGTTCCATTGATCAAGGAACATTGCAGAAGGAGAGGATCATCACAACATGAGACCGAAAAGAAAAACAAAAAGAAGTTTCCGCATCTGGCTGCTCCTGATTCTGCTTCCTCTGTAAACCAGGATCTGCGTGCAATGGACGCCTCAATGATTACTAATCCCAAATCCATTGTCTCCCTTCCCTCTTTGTTCATGGGGAGGTCGGGAGGTAGTATTAGAAGTTCCCAATGTAATGTCACTATGGGACAAACGGTTAGCTTCCCGAGGCAAAAGACTCTGACTTTAAAAGTTAGCCGGAACGTGAAGAGAAAAAGTGGTGGTGGTGCGTTTGCTGCTACTTGTAGCAGTGGGGATAAGATTCTTGTGGCTAACAGAGGTGAAATCGCTGTCCGTGTTATCCGAACAGCTCACGAAATGGGGATCCCTTGTGTTGCTGTTTACTCAACTATAGACAAGGATGCACTTCATGTGAAGTTGGCTGATGAAGCTGTTTGTATTGGTGAAGCTCCTAGCAACCAGTCGTATTTGTTGATACCGAATGTTCTGTCAGCTGCGATTAGCAGAGGATGTACAATGCTCCATCCTGGATATGGATTCCTTGCGGAGAACGCTCTTTTTGTAGAGATGTGTAGAGAACACAGGATCAATTTCATTGGACCAAATCCTGATAGCATCCGTGTCATGGGTGACAAATCAACTGCTAGGGAGACAATGAAAAATGCTGGTGTCCCTACTGTACCAGGGAGTGATGGATTATTGCAGAGCACAGAGGAAGGAGTCAGGCTCGCCAATGAGATTGGGTACCCTGTAATGATCAAGGCAACAGCAGGTGGTGGTGGACGTGGAATGCGTCTTGCCAATGAACCGTCAGAGTTTGTGAAACTGTTGCAGCAAGCAAAGAGTGAGGCCGCTGCTGCTTTTGGAAATGATGGAGTTTATCTGGAGAAGTACGTGCAAAATCCCCGTCATATTGAGTTCCAGATTCTTGCCGATAAATTTGGTAACGTTGTTCACTTTGGCGAGCGTGACTGCAGCATCCAGAGGCGTAACCAAAAGTTGCTGGAAGAAGCACCTTCTCCTGCACTGACCCCTGAGCTGCGAAAAGCCATGGGTGATGCAGCAGTGGCAGCAGCAGCGTCCATTGGTTACATTGGTGTTGGTACAGTGGAGTTTCTTCTGGATGAGAGAGGTTCCTTCTATTTCATGGAAATGAACACTAGAATCCAGGTGGAGCACCCTGTGACGGAGATGATTTACTCAGTTGATTTGATTGAAGAACAGATCCGTGTTGCAATGGGAGAGAAACTGCGTTATACACAGGATGAGATTGTGCTTAGAGGACATTCGATTGAGTGTCGTATCAATGCAGAAGACCCATTTAAAGGATTCAGACCTGGACCTGGAAGAATAACATCGTATCTGCCATCTGGAGGTCCTTTTGTTAGGATGGATAGCCATGTGTATCCGGACTATGTTGTTCCTCCAAGCTATGATTCTCTTCTTGGAAAGCTTATTGTATGGGCTCCAACGAGGGAAAGGGCGATCGAGCGGATGAAGCGTGCACTCAATGACACTATTATTACAGGGGTTCCCACCACCATTGAGTACCACAAGCTTATCCTTGAAGTTGAGGATTTCAAAAACGGAAAAGTTGATACAGCTTTCATCCCCAAGCATGAAGAGGAATTAGCAGAGCCTGATGAAATTGTCCCAGTGAAAGATTTGACAAATGTAGCTGCTTAGAATCCATCAGCTCTTACATGAAGCAGTGATATTTGGAACAACAGGGGATTCAGTTATGCCAATATGTCCGCAAAGTTTTCTTACCTGATTCTGGTGTCTTCGCCTTTTGTGATGTTATGCAATAGCAACTTCACACATGGTTTCGAAAATAGTTGTGTTTTTTTTTTCCGGTTGAGTTTATGGTATTTACAGTACTTCATTTCAGACCTGAGACCATTTTTAAGTATTTCTTGACTGCAATAGTTGAGTTTATTTATGTTATTAGCAAGTCCGAACTTTAAATCATTTATAAACACAATGTCCTTGTGGTGTTATGCAAGACAGAGTCATCTTGTAAGTTT
CDS Sequence
  • >BnaA09g48250D
    ATGGTGAGTCTATTTTCGTCAAGGAAGAGATCGAGGAAAGAAAGAAAGAACCCTTATTCAGATCTCGGACTCGAAAAGTTCTCTGCACTTCTATCCGAGCTAGACGAGAAGAGACAAAGCATTTACGCAACGAGGGTCGACTCAGATGGGCCGCCACTTGTTCGGTTTGTGTTCAAAAGCTCGGGAGAGTGCGTCCCTATCATGATCAAGACAAAGAAGGTAACCAAGAAGAAGGATTCTCAATATGATTTAAAGGTCAAGATCGAAACAAAAGTGGAAGAGGAAAATGAAACAAAGAAAACAGAGTTGGTAACAGAGCAGAAACAGAGCTGCGTATTGAATGAGAATCTGAAGAAGATTTCAAGACCGAAGCATTTTTTACCCGTGACAACAATCTTGGTTCTAATCTTCTTCGTGTTCTTTGGACGAACAGTATCGATCATGTGCACTTGTATCGTTTGGTACTTGGTTCCATTGATCAAGGAACATTGCAGAAGGAGAGGATCATCACAACATGAGACCGAAAAGAAAAACAAAAAGAAGTTTCCGCATCTGGCTGCTCCTGATTCTGCTTCCTCTGTAAACCAGGATCTGCGTGCAATGGACGCCTCAATGATTACTAATCCCAAATCCATTGTCTCCCTTCCCTCTTTGTTCATGGGGAGGTCGGGAGGTAGTATTAGAAGTTCCCAATGTAATGTCACTATGGGACAAACGGTTAGCTTCCCGAGGCAAAAGACTCTGACTTTAAAAGTTAGCCGGAACGTGAAGAGAAAAAGTGGTGGTGGTGCGTTTGCTGCTACTTGTAGCAGTGGGGATAAGATTCTTGTGGCTAACAGAGGTGAAATCGCTGTCCGTGTTATCCGAACAGCTCACGAAATGGGGATCCCTTGTGTTGCTGTTTACTCAACTATAGACAAGGATGCACTTCATGTGAAGTTGGCTGATGAAGCTGTTTGTATTGGTGAAGCTCCTAGCAACCAGTCGTATTTGTTGATACCGAATGTTCTGTCAGCTGCGATTAGCAGAGGATGTACAATGCTCCATCCTGGATATGGATTCCTTGCGGAGAACGCTCTTTTTGTAGAGATGTGTAGAGAACACAGGATCAATTTCATTGGACCAAATCCTGATAGCATCCGTGTCATGGGTGACAAATCAACTGCTAGGGAGACAATGAAAAATGCTGGTGTCCCTACTGTACCAGGGAGTGATGGATTATTGCAGAGCACAGAGGAAGGAGTCAGGCTCGCCAATGAGATTGGGTACCCTGTAATGATCAAGGCAACAGCAGGTGGTGGTGGACGTGGAATGCGTCTTGCCAATGAACCGTCAGAGTTTGTGAAACTGTTGCAGCAAGCAAAGAGTGAGGCCGCTGCTGCTTTTGGAAATGATGGAGTTTATCTGGAGAAGTACGTGCAAAATCCCCGTCATATTGAGTTCCAGATTCTTGCCGATAAATTTGGTAACGTTGTTCACTTTGGCGAGCGTGACTGCAGCATCCAGAGGCGTAACCAAAAGTTGCTGGAAGAAGCACCTTCTCCTGCACTGACCCCTGAGCTGCGAAAAGCCATGGGTGATGCAGCAGTGGCAGCAGCAGCGTCCATTGGTTACATTGGTGTTGGTACAGTGGAGTTTCTTCTGGATGAGAGAGGTTCCTTCTATTTCATGGAAATGAACACTAGAATCCAGGTGGAGCACCCTGTGACGGAGATGATTTACTCAGTTGATTTGATTGAAGAACAGATCCGTGTTGCAATGGGAGAGAAACTGCGTTATACACAGGATGAGATTGTGCTTAGAGGACATTCGATTGAGTGTCGTATCAATGCAGAAGACCCATTTAAAGGATTCAGACCTGGACCTGGAAGAATAACATCGTATCTGCCATCTGGAGGTCCTTTTGTTAGGATGGATAGCCATGTGTATCCGGACTATGTTGTTCCTCCAAGCTATGATTCTCTTCTTGGAAAGCTTATTGTATGGGCTCCAACGAGGGAAAGGGCGATCGAGCGGATGAAGCGTGCACTCAATGACACTATTATTACAGGGGTTCCCACCACCATTGAGTACCACAAGCTTATCCTTGAAGTTGAGGATTTCAAAAACGGAAAAGTTGATACAGCTTTCATCCCCAAGCATGAAGAGGAATTAGCAGAGCCTGATGAAATTGTCCCAGTGAAAGATTTGACAAATGTAGCTGCTTAG
Protein Sequence
  • >BnaA09g48250D
    MVSLFSSRKRSRKERKNPYSDLGLEKFSALLSELDEKRQSIYATRVDSDGPPLVRFVFKSSGECVPIMIKTKKVTKKKDSQYDLKVKIETKVEEENETKKTELVTEQKQSCVLNENLKKISRPKHFLPVTTILVLIFFVFFGRTVSIMCTCIVWYLVPLIKEHCRRRGSSQHETEKKNKKKFPHLAAPDSASSVNQDLRAMDASMITNPKSIVSLPSLFMGRSGGSIRSSQCNVTMGQTVSFPRQKTLTLKVSRNVKRKSGGGAFAATCSSGDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIGEAPSNQSYLLIPNVLSAAISRGCTMLHPGYGFLAENALFVEMCREHRINFIGPNPDSIRVMGDKSTARETMKNAGVPTVPGSDGLLQSTEEGVRLANEIGYPVMIKATAGGGGRGMRLANEPSEFVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQILADKFGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYTQDEIVLRGHSIECRINAEDPFKGFRPGPGRITSYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDTIITGVPTTIEYHKLILEVEDFKNGKVDTAFIPKHEEELAEPDEIVPVKDLTNVAA