Gene Details:
- Gene ID: BnaC05g42890D
- Gene Symbol: BnaC05.PMT6
- Gene Name:
- Genome: B. napus reference genome Darmor v4.1
- Species: Brassica napus
Functional Descriptions:
- BnPMT6s, in two QTLs were identified and experimentally demonstrated to negatively regulate SOC.
- BnPMT6 is a negative regulator of SOC.
- These results suggest that BnPMT6 is a negative regulator of SOC and may function as a downstream target gene of LEC1/FUS3.
Function-related keywords:
Literature:
- and transcriptome-wide association studies provide insights into the genetic basis of natural variation of seed oil content in Brassica napus. DOI: 10.1016/j.molp.2020.12.003 ; PMID: 33309900
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >BnaC05g42890D
GAGGAAGACGAAGAACAACGAACCAGTAGAGACCGAAGCAGAAAGAAAGAAAGAAAGAGCGAGAGATATACAATGAGAGGTTACAACGTGTTCGGTGCAACGAGATCGGGGAAGACGATACTAGTTGCTCTCTTTCTAACGGTTGGATCATTCTACGCTGGCTCTCTTTTCGGCAACAACGAACCCATCTACGTCTCACAATCTGCTCTCTTCAAATTCCCAAACAAAATCAACCTTACTCACCGAGTCTCACCACTAGTCATACCCGAAACTGGGATGAATGTGTGTCCCTTAAAGTTCAACGAGTATCTCCCTTGTCACAACGTCACTTACGTTCACCAGCTGAGCTTGAACGTCTCTAGAAGAGAAGAACTCGAGAGACACTGCCCGCCGCTCGAGCAGCGTCTCTTCTGCTTGGTGCCTCCACCAAAAGATTACAAGATACCTTTGAGATGGCCAACCAGTAGAGACTACGTGTGGCGAAGCAATGTAAATCATACGCATCTTGCTCAAGTTAACGGTGGACAAAGCTGGGTGCAAGAACATGGAGAGTTTTGGTGGTTCCCTGGTGGTGGTACTCATTTCAAACATGGTGCTTCAGAATACATACAGAGGTTGGGAGGTATGGTGACTAATGAAACAGGTGACTTGCGTTCAGCTGGGGTGGTACAAGTTCTTGACGTTGGATGTGGAGTTGCAAGCTTTGCGGCTTACCTTCTTCCTTTAGGTATACAGACAATGTCCTTTGCTCCTAATGATGCTCATGAGAATCAGATTCAGTTTGCATTGGAGAGAGGCATCGGCGGTGCAATGATCTCTGCTGTTGCCACCAAACAACTGCCGTATCCCTCAGCTTCTTTTGAGATGGTTCATTGTTCGAGATGCCGTGTTGATTGGCATGCAAACGATGGGATCTTACTTAAAGAAGTTCATAGGCTTCTTAGACCCAATGGATACTTTGTGTATACGTCGCCACCAGCTTATAGGAATGATAAAGAGTATCCAATGATTTGGGATAAGTTGGTTAGTCTAACTAACTCAATGTGCTGGAAGCTTGTTTCCCGGAAGGTACAAACTGCTATATGGATTAAAGAAGAGAACGTGGAGTGCCTTAAGAAAAAGGCAGAGCTAAAGGTTATAAGCTTATGTGATGTGGAAGATGCTTTGAAACCGTCCTGGCAAGTTCCTTTTAGAGATTGTGTGCAGATTAGTGGACATACAGAGAAGAGACCCTCTTCTTTAGCTGAACGTCTTTCCACATATCCAGAAACTCTAAGAAACATAGGCATCAGTGAAGATGAGTATGCATCAGACACAGTCTTCTGGAGAGAACAAGTTAAACAGTACTGGCGGTTTATGAATGTCAATGAGAGTGAAGTGCGGAATGTGATGGACATGAATGCATTTATTGGTGGATTTGCTTCGGCCATGAACTCGTCCCCTGTTTGGGTAATGAACGTAGTACCTGCTACCATGAATGAAACTTTGTCTGGAGTTTTTGAGAGGGGCTTAACTGGTGCTTTCCATGATTGGTGTGAGCCGTTCTCAACATATCCGCGGACGTATGATTTGTTGCACGCCAATCATGTCATCTCTCATTACCAAAGCCGTGGAGATGGTTGTTTGGTAGAGGATATCATGCTTGAGATGGACCGGATGATTCGCCCTCAGGGATTCATCATTATAAGGGACGAGGAACCTATAATCTCAAGGATCCGAGACTTGGCTCCTAAGTACCTCTGGGAAGTGGAGACTCATCAGCTGGAAAACAAATTCAAGAAGACAGAAACCGTTCTGTTTTGCAGAAAGAGATTCTGGGCAATCATCTGA
CDS Sequence
- >BnaC05g42890D
ATGAGAGGTTACAACGTGTTCGGTGCAACGAGATCGGGGAAGACGATACTAGTTGCTCTCTTTCTAACGGTTGGATCATTCTACGCTGGCTCTCTTTTCGGCAACAACGAACCCATCTACGTCTCACAATCTGCTCTCTTCAAATTCCCAAACAAAATCAACCTTACTCACCGAGTCTCACCACTAGTCATACCCGAAACTGGGATGAATGTGTGTCCCTTAAAGTTCAACGAGTATCTCCCTTGTCACAACGTCACTTACGTTCACCAGCTGAGCTTGAACGTCTCTAGAAGAGAAGAACTCGAGAGACACTGCCCGCCGCTCGAGCAGCGTCTCTTCTGCTTGGTGCCTCCACCAAAAGATTACAAGATACCTTTGAGATGGCCAACCAGTAGAGACTACGTGTGGCGAAGCAATGTAAATCATACGCATCTTGCTCAAGTTAACGGTGGACAAAGCTGGGTGCAAGAACATGGAGAGTTTTGGTGGTTCCCTGGTGGTGGTACTCATTTCAAACATGGTGCTTCAGAATACATACAGAGGTTGGGAGGTATGGTGACTAATGAAACAGGTGACTTGCGTTCAGCTGGGGTGGTACAAGTTCTTGACGTTGGATGTGGAGTTGCAAGCTTTGCGGCTTACCTTCTTCCTTTAGGTATACAGACAATGTCCTTTGCTCCTAATGATGCTCATGAGAATCAGATTCAGTTTGCATTGGAGAGAGGCATCGGCGGTGCAATGATCTCTGCTGTTGCCACCAAACAACTGCCGTATCCCTCAGCTTCTTTTGAGATGGTTCATTGTTCGAGATGCCGTGTTGATTGGCATGCAAACGATGGGATCTTACTTAAAGAAGTTCATAGGCTTCTTAGACCCAATGGATACTTTGTGTATACGTCGCCACCAGCTTATAGGAATGATAAAGAGTATCCAATGATTTGGGATAAGTTGGTTAGTCTAACTAACTCAATGTGCTGGAAGCTTGTTTCCCGGAAGGTACAAACTGCTATATGGATTAAAGAAGAGAACGTGGAGTGCCTTAAGAAAAAGGCAGAGCTAAAGGTTATAAGCTTATGTGATGTGGAAGATGCTTTGAAACCGTCCTGGCAAGTTCCTTTTAGAGATTGTGTGCAGATTAGTGGACATACAGAGAAGAGACCCTCTTCTTTAGCTGAACGTCTTTCCACATATCCAGAAACTCTAAGAAACATAGGCATCAGTGAAGATGAGTATGCATCAGACACAGTCTTCTGGAGAGAACAAGTTAAACAGTACTGGCGGTTTATGAATGTCAATGAGAGTGAAGTGCGGAATGTGATGGACATGAATGCATTTATTGGTGGATTTGCTTCGGCCATGAACTCGTCCCCTGTTTGGGTAATGAACGTAGTACCTGCTACCATGAATGAAACTTTGTCTGGAGTTTTTGAGAGGGGCTTAACTGGTGCTTTCCATGATTGGTGTGAGCCGTTCTCAACATATCCGCGGACGTATGATTTGTTGCACGCCAATCATGTCATCTCTCATTACCAAAGCCGTGGAGATGGTTGTTTGGTAGAGGATATCATGCTTGAGATGGACCGGATGATTCGCCCTCAGGGATTCATCATTATAAGGGACGAGGAACCTATAATCTCAAGGATCCGAGACTTGGCTCCTAAGTACCTCTGGGAAGTGGAGACTCATCAGCTGGAAAACAAATTCAAGAAGACAGAAACCGTTCTGTTTTGCAGAAAGAGATTCTGGGCAATCATCTGA
Protein Sequence
- >BnaC05g42890D
MRGYNVFGATRSGKTILVALFLTVGSFYAGSLFGNNEPIYVSQSALFKFPNKINLTHRVSPLVIPETGMNVCPLKFNEYLPCHNVTYVHQLSLNVSRREELERHCPPLEQRLFCLVPPPKDYKIPLRWPTSRDYVWRSNVNHTHLAQVNGGQSWVQEHGEFWWFPGGGTHFKHGASEYIQRLGGMVTNETGDLRSAGVVQVLDVGCGVASFAAYLLPLGIQTMSFAPNDAHENQIQFALERGIGGAMISAVATKQLPYPSASFEMVHCSRCRVDWHANDGILLKEVHRLLRPNGYFVYTSPPAYRNDKEYPMIWDKLVSLTNSMCWKLVSRKVQTAIWIKEENVECLKKKAELKVISLCDVEDALKPSWQVPFRDCVQISGHTEKRPSSLAERLSTYPETLRNIGISEDEYASDTVFWREQVKQYWRFMNVNESEVRNVMDMNAFIGGFASAMNSSPVWVMNVVPATMNETLSGVFERGLTGAFHDWCEPFSTYPRTYDLLHANHVISHYQSRGDGCLVEDIMLEMDRMIRPQGFIIIRDEEPIISRIRDLAPKYLWEVETHQLENKFKKTETVLFCRKRFWAII