Gene Details:
- Gene ID: Glyma.09G025300
- Gene Symbol: GmDCL2b
- Gene Name: endoribonuclease dicer-like 2b
- Genome: Wm82.a4.v1
- Species: Glycine max
Functional Descriptions:
- Endogenous LIR-derived transcripts in soybean are predominantly processed by GmDCL2 into 22-nucleotide siRNAs and uncovered a role for DCL2 in regulating natural traits.
- Disruption of this process in Gmdcl2a/2b mutants substantially increased CHS mRNA levels in the seed coat, thus changing the coat color from yellow to brown.
- DCL2-Dependent 22-nucleotide siRNAs Regulate the Seed Coat Color in Soybean
Function-related keywords:
Literature:
- Soybean DICER-LIKE2 Regulates Seed Coat Color via Production of Primary 22-Nucleotide Small Interfering RNAs from Long Inverted Repeats. DOI: 10.1105/tpc.20.00562 ; PMID: 33077493
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Glyma.09G025300.1
ATACTTCCTTTTGTTTGGTCTTCCACCAACTTTTCTTTCTCGGCAGAGTCTTCTTCTGATTACTTTTTTACGTCAAGCATGGACTCATCGCTCTCACTCTCAGTGTACGGCGGAAAGAAAAGAAAAAGAGAATCAGCACAACGTTCAAATTCATTGGTTGATCAGAAAGGCAAAGAAACCATGGAAGAGGCACCATCAATGGAAATGGATACTGATTCACAGGAGGATCAGAACATTGCTCCTGATGTTCTACCATTTGCTAGAAGCTATCAGCTTGAAGCTTTGTACAAAGCTATCCATGAGAATACCATAGTGTACTTGGAGACTGGTTCAGGCAAGACTTTGATAGCTATCATGCTTCTTCGCAGCTATGCTCATCAACTGCGAAAGCCTTCTCCTTACATTGCAGTGTTCTTGGTTCCCCAAGTTGTGTTGGTCTCTCAACAAGCGGAAGCCGTGAAAAGACATACTGATTTGAAAGTGGGAATGTATTGGGGAGATATGGGAGTTGACTTCTGGGATGCTGCTACCTGGAAACAAGAAATGGAAAAACATGAGGTGCTTGTCATGACTCCTGCAATATTGCTGAGCTGCTTGAGGCATAGCTTCTTCAAACTGAATATGATTAATGTCTTAATAATGGATGAATGCCATCATGCTAGGGGTAAACACCCTTATGCCTGCATCATGACTGAATTTTATCATCATCAATTAAAATCTGGTATCTCTGACCTCCCTCGAATTTTTGGGATGACTGCATCTCCTATTAAGTCGAAAGTTGGAAAATCTGAATCATCCTGGTCAGAGAATATTCAGAAACTAATGATTCTAATGCATTCAAAGGTATATACATGTGTAAGTGAAGCTGTCATCACAGAGTTCATACCAACATCAACACCAAAATTCAAGTTTTACAGCAACAATGGAATTCAATTTGTATTATTTGAAGAATTAGCATCTAAACTCAAGATGTTAAAAGAGCAGCATGAACTCACTCTAAGAAGTTCAGATTTCACTAAATCAATTGCTGAGTCTGCACAAAAAAGAATAACAAAGATTTTTTGTTCTTTAATGTTTTGCCTGGATGAGCTTGGTGTTTGGTTGGCTTTGAAGGCTGCAGAGTCTTTATCTTCCAATGAAATAGAGTCATTTTCATGGGGACACTCTGGGGATAGAGTTGTCAAAGACTTTATTTTGGAAGGTGTACATGCACTTAAAAGTTACTTGCAATGTGATCCTCAGTGGTCTATTGGTGACAATATTAAATCTGATGTGAAGATGGGTCTGTTGACCTCCAAAGTTTGCTGTCTTGTTGACTCTCTACTCGAGTACAGGGGTTTGACTGACATGAGATGCATAATATTTGTGGAAAGGATCATTACAGCCATTGTCCTTGAGGATCTATTGAATACCTTGCTTCCAAAATACAACAGCTGGAAGACTAAATTCATTGCAGGATACAATTTTGGATTGCAAAATCAGTCAAGGACAAAACAAAATGAAATCGTGAATGAATTTCGAATGGGATTGGTTAACATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTTCAAAGATGCAATTTAGTTATTAGATTTGATCCATGTCCCACAGTGTGCAGTTTCATACAGTCCCGAGGACGTGCCAGAATGAGAAATTCAGATTACATATTAATGGTTAAGAGTGGGGATTCAGTTACGTGTTCTCGACTAGAGAAATACCTTGCTAGTGCAGATATTATGAGGAAGGAGTCATTGCGTCATTCTTCCCTTCCATGTGATCCTTTTGAAGGTGATGAATTTGATAAGGAAGCTTATCACGTATCAAGCACAGGAGCCATTGCAAATCTTAGTTCTAGCATTAGTTTGATATACTTATATTGCTCGCGCCTCCCTGCAGATGGGTACTTTAAACCAGCTCCAAGGTGGGACAAAGAGACTGGAACACTGTATCTTCCCAAGAGTTGCCCTCTACAGCCTATTTGTGTAGAAGGTAACAAAAAACACTTAAAGAATATCGCATGCCTTGAAGCATGCAAACAACTTCATAAAATTGGAGCTCTGACAGATAATCTTGTTCCTGATATTGTCATTGAAGAAGCAGAGGTGGAGGAATTTGGGAATGAACCTTATGATGAAAACCAACCAACTTTTGTCCCATTTGGATTGGTAAATTCTGTGTCAAATAATAGCCACACGATATACCATTGTTACTTGATGGAACTCAGTCAAAATTTTAGCTATGATATCTCTGTGCAAGATATTTTTCTTGCCATAAGAATTGAGCTTGATCCAGAAATTGGATGCACACAATTTGATATGGGTTTTGACAGAGGTAGCGTGTCACTAAAGTTAAGATACAAAGGAACGATTAATCTTTCGCCAAACCTGGTTCTTTTGTGTAAAAAGTTCCAGGTCACTTTGCTTGGAAGTATCATAGATCATAGCATGAATAAGTTGGCAACTAGTTTAGACAAATGCTATTTGGAAGACAATGTTGAGATTGATTATCTGCTGCTTCCAGCTATTGGTAAAGGGGAAAAATCACATGTAAACTGGTTAGCTATCAAATCTGTAGAACCATCTAGTTTTACGTGTAAGTATCATCAACCCCACATAGAGACAAAAAGTGGTCTAGTTTGCACTTGTAAACTACAAGATGCGTTGGTTTGTACTTCCCATCCTGGTGGTAAGATTTATTTCTATATCACCACTGGTATAATGGAGTTGCATGGAAACTCACCTATGGAACTAAGGGGTGGTGAAGTTACTACATACAAGAAATACTATGAACAACACCATGGCATTCAACTACAATTTGAAAATCAATGGCTACTCAAAGCAAGACACCATTTTAAAGTTAAAAATTACTGTCATGGACAAAAACAAGGGAAGGATGGAGAAGCAAGCAAGGCCTTTGTTGAGTTACCTCCTGAACTGTGCTCTATAGTCATGTCACCGATAAAAGATAGTATCATTTATACCTTCTCATTTATTCCATCAATCATGCATCGGCTGGAATCATTACTTGGAGCTTTCAACTTAAAGAAGATGCATTTGGATCATTGCACACAAAATGAAATTCAAACAATCAAGGTCTTGGAAGCAATAACTACTAAAAGATGCAATGAGGCCTTTCATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTTTAAAATATGCTGCCAGTCAACAGCTTTTTAAAACATATAAAAATCACCATGAAGGTCTCCTTAGTGTGAAGAGGGAAAAGATCATTTCTAATGCTGCCCTCTGTAAGTTAGGGTGCAGTTCTGGACTTCCGGGCTTCATACGAAATGAGCCTTTTGATCCTCATGCCTGGACCATTCCTGGGGATAAACCTGAAAGTTTAAAATTAGAAGAGCTGGTTATCAAGGGGAAAAAAATTTATGTTCACGGAAAAAGAAAATTAAATCGCAAGATTATTGCTGATGTTGTTGAGGCACTAATTGGTGCCTTCCTCAGTACTGGTGGCGAAATATCTGCATTGCTGTTTATGGATTGGGTTGGTATTAAAGTCAGTTTTGATAAAATACCCTATGAGAGGCACTTTGACATTCAACCTGAGAAACTGTTAAATGTCAGATTCCTAGAATCACAATTAAAATACTCATTCCATGACCATTCTCTTTTAGTGGAAGCCCTAACCCATGGTTCGTACATGCTGCCTGAAGTTCCTAGATGTTATCAGCGACTAGAATTTCTTGGAGATTCAGTTTTGGATTATCTGATTACTTGGCATTTGTACAATGAATATCCTGGCATGTCACCTGGGCAGTTGACTGACATGAGGGCAGCTTCTGTGAATAATGATTGTTATGCATGGTCTGCCATTAAGCATGGGTTGCACAAACATGTACTCCATGCCTCACAAGAACTGCATAAGCACATTGCTGTCACACTTAACAATTTTGATAAGTTGTCTTCATCATCAACTTTTGGATACGAGTCAGAGGCATCACCCCCTAAGGTACTTGGAGACATTATAGAGTCTCTGGCTGGAGCGATTCTTGTTGACTCAGGATTCAATAAGGAGGTTGTGTGGCAAAGCATAAGGCCACTTTTGGAACCCCTTGTGACACCAGAAACATTGAAGCTCCATCCCATCCGAGAGTTGAATGAACTATGCCAGAAAAGAAGTTATAAGATTGTACTAGAGGACGTGTCTCGCAAAGATGGTGTTACTAATTATAGAATGAAGGTAGAAGCTGATGGGGTCATTCACGAGTATGAGTATACCGGCCCTGCTCTTAGGGACACAGCCAAGAAGATAGCCTGCAAGGAAATTTTGAATTCCTTGAAGGAAGATTTATAGGGTACACAAGGGCTAACCGGTCATTGTAGGCTTGTAATACTTGTTAATATTTCTTTAGTCCTTGTTTTGTGTAATGGTTATAATATTAAGGCTTAAATATGTTTATAGTCCCTCAAATTTACGACAACCAATTGTATATATTATTTAAAGATATCATTAAAATATATCATTTAAAGCAAGCATTTGGTTCTTGGTGGCGGG
CDS Sequence
- >Glyma.09G025300.1
ATGGACTCATCGCTCTCACTCTCAGTGTACGGCGGAAAGAAAAGAAAAAGAGAATCAGCACAACGTTCAAATTCATTGGTTGATCAGAAAGGCAAAGAAACCATGGAAGAGGCACCATCAATGGAAATGGATACTGATTCACAGGAGGATCAGAACATTGCTCCTGATGTTCTACCATTTGCTAGAAGCTATCAGCTTGAAGCTTTGTACAAAGCTATCCATGAGAATACCATAGTGTACTTGGAGACTGGTTCAGGCAAGACTTTGATAGCTATCATGCTTCTTCGCAGCTATGCTCATCAACTGCGAAAGCCTTCTCCTTACATTGCAGTGTTCTTGGTTCCCCAAGTTGTGTTGGTCTCTCAACAAGCGGAAGCCGTGAAAAGACATACTGATTTGAAAGTGGGAATGTATTGGGGAGATATGGGAGTTGACTTCTGGGATGCTGCTACCTGGAAACAAGAAATGGAAAAACATGAGGTGCTTGTCATGACTCCTGCAATATTGCTGAGCTGCTTGAGGCATAGCTTCTTCAAACTGAATATGATTAATGTCTTAATAATGGATGAATGCCATCATGCTAGGGGTAAACACCCTTATGCCTGCATCATGACTGAATTTTATCATCATCAATTAAAATCTGGTATCTCTGACCTCCCTCGAATTTTTGGGATGACTGCATCTCCTATTAAGTCGAAAGTTGGAAAATCTGAATCATCCTGGTCAGAGAATATTCAGAAACTAATGATTCTAATGCATTCAAAGGTATATACATGTGTAAGTGAAGCTGTCATCACAGAGTTCATACCAACATCAACACCAAAATTCAAGTTTTACAGCAACAATGGAATTCAATTTGTATTATTTGAAGAATTAGCATCTAAACTCAAGATGTTAAAAGAGCAGCATGAACTCACTCTAAGAAGTTCAGATTTCACTAAATCAATTGCTGAGTCTGCACAAAAAAGAATAACAAAGATTTTTTGTTCTTTAATGTTTTGCCTGGATGAGCTTGGTGTTTGGTTGGCTTTGAAGGCTGCAGAGTCTTTATCTTCCAATGAAATAGAGTCATTTTCATGGGGACACTCTGGGGATAGAGTTGTCAAAGACTTTATTTTGGAAGGTGTACATGCACTTAAAAGTTACTTGCAATGTGATCCTCAGTGGTCTATTGGTGACAATATTAAATCTGATGTGAAGATGGGTCTGTTGACCTCCAAAGTTTGCTGTCTTGTTGACTCTCTACTCGAGTACAGGGGTTTGACTGACATGAGATGCATAATATTTGTGGAAAGGATCATTACAGCCATTGTCCTTGAGGATCTATTGAATACCTTGCTTCCAAAATACAACAGCTGGAAGACTAAATTCATTGCAGGATACAATTTTGGATTGCAAAATCAGTCAAGGACAAAACAAAATGAAATCGTGAATGAATTTCGAATGGGATTGGTTAACATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTTCAAAGATGCAATTTAGTTATTAGATTTGATCCATGTCCCACAGTGTGCAGTTTCATACAGTCCCGAGGACGTGCCAGAATGAGAAATTCAGATTACATATTAATGGTTAAGAGTGGGGATTCAGTTACGTGTTCTCGACTAGAGAAATACCTTGCTAGTGCAGATATTATGAGGAAGGAGTCATTGCGTCATTCTTCCCTTCCATGTGATCCTTTTGAAGGTGATGAATTTGATAAGGAAGCTTATCACGTATCAAGCACAGGAGCCATTGCAAATCTTAGTTCTAGCATTAGTTTGATATACTTATATTGCTCGCGCCTCCCTGCAGATGGGTACTTTAAACCAGCTCCAAGGTGGGACAAAGAGACTGGAACACTGTATCTTCCCAAGAGTTGCCCTCTACAGCCTATTTGTGTAGAAGGTAACAAAAAACACTTAAAGAATATCGCATGCCTTGAAGCATGCAAACAACTTCATAAAATTGGAGCTCTGACAGATAATCTTGTTCCTGATATTGTCATTGAAGAAGCAGAGGTGGAGGAATTTGGGAATGAACCTTATGATGAAAACCAACCAACTTTTGTCCCATTTGGATTGGTAAATTCTGTGTCAAATAATAGCCACACGATATACCATTGTTACTTGATGGAACTCAGTCAAAATTTTAGCTATGATATCTCTGTGCAAGATATTTTTCTTGCCATAAGAATTGAGCTTGATCCAGAAATTGGATGCACACAATTTGATATGGGTTTTGACAGAGGTAGCGTGTCACTAAAGTTAAGATACAAAGGAACGATTAATCTTTCGCCAAACCTGGTTCTTTTGTGTAAAAAGTTCCAGGTCACTTTGCTTGGAAGTATCATAGATCATAGCATGAATAAGTTGGCAACTAGTTTAGACAAATGCTATTTGGAAGACAATGTTGAGATTGATTATCTGCTGCTTCCAGCTATTGGTAAAGGGGAAAAATCACATGTAAACTGGTTAGCTATCAAATCTGTAGAACCATCTAGTTTTACGTGTAAGTATCATCAACCCCACATAGAGACAAAAAGTGGTCTAGTTTGCACTTGTAAACTACAAGATGCGTTGGTTTGTACTTCCCATCCTGGTGGTAAGATTTATTTCTATATCACCACTGGTATAATGGAGTTGCATGGAAACTCACCTATGGAACTAAGGGGTGGTGAAGTTACTACATACAAGAAATACTATGAACAACACCATGGCATTCAACTACAATTTGAAAATCAATGGCTACTCAAAGCAAGACACCATTTTAAAGTTAAAAATTACTGTCATGGACAAAAACAAGGGAAGGATGGAGAAGCAAGCAAGGCCTTTGTTGAGTTACCTCCTGAACTGTGCTCTATAGTCATGTCACCGATAAAAGATAGTATCATTTATACCTTCTCATTTATTCCATCAATCATGCATCGGCTGGAATCATTACTTGGAGCTTTCAACTTAAAGAAGATGCATTTGGATCATTGCACACAAAATGAAATTCAAACAATCAAGGTCTTGGAAGCAATAACTACTAAAAGATGCAATGAGGCCTTTCATTATGAGTCTCTAGAGACTCTTGGAGATTCTTTTTTAAAATATGCTGCCAGTCAACAGCTTTTTAAAACATATAAAAATCACCATGAAGGTCTCCTTAGTGTGAAGAGGGAAAAGATCATTTCTAATGCTGCCCTCTGTAAGTTAGGGTGCAGTTCTGGACTTCCGGGCTTCATACGAAATGAGCCTTTTGATCCTCATGCCTGGACCATTCCTGGGGATAAACCTGAAAGTTTAAAATTAGAAGAGCTGGTTATCAAGGGGAAAAAAATTTATGTTCACGGAAAAAGAAAATTAAATCGCAAGATTATTGCTGATGTTGTTGAGGCACTAATTGGTGCCTTCCTCAGTACTGGTGGCGAAATATCTGCATTGCTGTTTATGGATTGGGTTGGTATTAAAGTCAGTTTTGATAAAATACCCTATGAGAGGCACTTTGACATTCAACCTGAGAAACTGTTAAATGTCAGATTCCTAGAATCACAATTAAAATACTCATTCCATGACCATTCTCTTTTAGTGGAAGCCCTAACCCATGGTTCGTACATGCTGCCTGAAGTTCCTAGATGTTATCAGCGACTAGAATTTCTTGGAGATTCAGTTTTGGATTATCTGATTACTTGGCATTTGTACAATGAATATCCTGGCATGTCACCTGGGCAGTTGACTGACATGAGGGCAGCTTCTGTGAATAATGATTGTTATGCATGGTCTGCCATTAAGCATGGGTTGCACAAACATGTACTCCATGCCTCACAAGAACTGCATAAGCACATTGCTGTCACACTTAACAATTTTGATAAGTTGTCTTCATCATCAACTTTTGGATACGAGTCAGAGGCATCACCCCCTAAGGTACTTGGAGACATTATAGAGTCTCTGGCTGGAGCGATTCTTGTTGACTCAGGATTCAATAAGGAGGTTGTGTGGCAAAGCATAAGGCCACTTTTGGAACCCCTTGTGACACCAGAAACATTGAAGCTCCATCCCATCCGAGAGTTGAATGAACTATGCCAGAAAAGAAGTTATAAGATTGTACTAGAGGACGTGTCTCGCAAAGATGGTGTTACTAATTATAGAATGAAGGTAGAAGCTGATGGGGTCATTCACGAGTATGAGTATACCGGCCCTGCTCTTAGGGACACAGCCAAGAAGATAGCCTGCAAGGAAATTTTGAATTCCTTGAAGGAAGATTTATAG
Protein Sequence
- >Glyma.09G025300.1
MDSSLSLSVYGGKKRKRESAQRSNSLVDQKGKETMEEAPSMEMDTDSQEDQNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSGKTLIAIMLLRSYAHQLRKPSPYIAVFLVPQVVLVSQQAEAVKRHTDLKVGMYWGDMGVDFWDAATWKQEMEKHEVLVMTPAILLSCLRHSFFKLNMINVLIMDECHHARGKHPYACIMTEFYHHQLKSGISDLPRIFGMTASPIKSKVGKSESSWSENIQKLMILMHSKVYTCVSEAVITEFIPTSTPKFKFYSNNGIQFVLFEELASKLKMLKEQHELTLRSSDFTKSIAESAQKRITKIFCSLMFCLDELGVWLALKAAESLSSNEIESFSWGHSGDRVVKDFILEGVHALKSYLQCDPQWSIGDNIKSDVKMGLLTSKVCCLVDSLLEYRGLTDMRCIIFVERIITAIVLEDLLNTLLPKYNSWKTKFIAGYNFGLQNQSRTKQNEIVNEFRMGLVNIIVATSILEEGLDVQRCNLVIRFDPCPTVCSFIQSRGRARMRNSDYILMVKSGDSVTCSRLEKYLASADIMRKESLRHSSLPCDPFEGDEFDKEAYHVSSTGAIANLSSSISLIYLYCSRLPADGYFKPAPRWDKETGTLYLPKSCPLQPICVEGNKKHLKNIACLEACKQLHKIGALTDNLVPDIVIEEAEVEEFGNEPYDENQPTFVPFGLVNSVSNNSHTIYHCYLMELSQNFSYDISVQDIFLAIRIELDPEIGCTQFDMGFDRGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDKCYLEDNVEIDYLLLPAIGKGEKSHVNWLAIKSVEPSSFTCKYHQPHIETKSGLVCTCKLQDALVCTSHPGGKIYFYITTGIMELHGNSPMELRGGEVTTYKKYYEQHHGIQLQFENQWLLKARHHFKVKNYCHGQKQGKDGEASKAFVELPPELCSIVMSPIKDSIIYTFSFIPSIMHRLESLLGAFNLKKMHLDHCTQNEIQTIKVLEAITTKRCNEAFHYESLETLGDSFLKYAASQQLFKTYKNHHEGLLSVKREKIISNAALCKLGCSSGLPGFIRNEPFDPHAWTIPGDKPESLKLEELVIKGKKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKVSFDKIPYERHFDIQPEKLLNVRFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHIAVTLNNFDKLSSSSTFGYESEASPPKVLGDIIESLAGAILVDSGFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHEYEYTGPALRDTAKKIACKEILNSLKEDL*