Gene Details:
- MSU gene ID: LOC_Os01g01340
- RAPdb gene ID: Os01g0102900
- Gene Symbol: Lir1 OsLIR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Circadian rhythmicity in the expression of a novel light-regulated rice gene . DOI: 10.1007/BF00039006 ; PMID: 8499615
- LIGHT-INDUCED RICE1 Regulates Light-Dependent Attachment of LEAF-TYPE FERREDOXIN-NADP+ OXIDOREDUCTASE to the Thylakoid Membrane in Rice and Arabidopsis . DOI: 10.1105/tpc.15.01027 ; PMID: 26941088
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g01340.2 cDNA ATCCCGGCCTTGTGGCACACTTGACTGGAGATGTATAAAGAGAGGAGGATGTGAAGAAAGAAGATATCTACCACCAAGCTAATTAAGCAAAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAATTAATTAAGCTCTACTACTATACTACCCAACTGATGAAATCTAGTGTAACTAACTGGAACTGAAATCGGAAAACACAAAATTGCACGCAGGGTGTTCCCCGAGGAGGCGTGCGACGATCTGGGCGGAGAGTTCTGCAAGGCCACCTGATCCCATTCCCATCCATGGAGAATTGGAGTCTTCTATCATCCTTCCTCCTCTGCTCCACTACCTTAATTCCATGTAGCTACAGATTTATATGTTAATCATCATGTAATGGTACATATCTCCTTGTTAATAAGGCACGCTAGTCTAGCTCCTCAAAATGATTTACAATAATATAATATTTACATACATATAATACACTTACTCCATCGAACAATACCTCTGTTATCTCATGGTTACTTCCCATGATCCCATCATCAACACCAACATTCATCACACTTTGCTGCGTTAGAGCAGGTACAATGGCAGGCTATAAGCCAGCTACAAACATATTTTACGAAGATAAATCAAGAGAGAGAAGAGCAACGGGCTACAGATTTGTAGCCAGCTGTAGCACGGACTCCAAGACGCAGTGTGTCTATGACAGGTGGGACTAGATATTAATAGTGTAGTATGTAACTATTGTATGAATGGGCTATTAGATTGACTATAGATGAATTGGAGCTAGTAGTTGGCTATACTATTGAACTTGCTCTTATATAGCAACAGGTACAGTATATGAATTAATTATCTCACAACTATTGGAAAGTTGGCGCCAGAAAACTGAGGGAGCACTGAAACAAATTTGTTGTGCGGAAACATTTATATTAAAAAAAACATATATTATGGACATATGTGATTACCTATAGATCAGCTCTAATCTGCGCCGGCCTCTCCGTCGTACTTGGGACCTGCCAATCCAGATACCTGTCAATGTTATCAAAACTACCTCCAGGGCAGACAACAGTGTCCAGAGAAGGCTATTCACCTAGACCAGGAGCAAATACATCATCCGGATACTTCCTCCGGTTATTCACCTAAAGCATTTCCCCTCGCTTGTTGTCATGGAGGCAATATGACAATATGAGTCATGGACGCTTTGCCAAACTTACCTGGAATCAATCAGCAACGGGCCGGAGCACAATATATGTCGATACCTGCTGCATAGTGCATACACTAGTGAGTACTATATGACAAAGAAATTGAAGTGTGACGCCAACACTATAACTCGTGACATTATATAGGCTGGAGATAAATATTTATGCATGTCTTTCCGAACGCAATAACTATATTCACGAATTTTTGTGTGTAACAA
- >LOC_Os01g01340.1 cDNA ATCCCGGCCTTGTGGCACACTTGACTGGAGATGTATAAAGAGAGGAGGATGTGAAGAAAGAAGATATCTACCACCAAGCTAATTAAGCAAAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAATTAATTAAGCTCTACTACTATACTACCCAACTGATGAAATCTAGTGTAACTAACTGGAACTGAAATCGGAAAACACAAAATTGCACGCAGGGTGTTCCCCGAGGAGGCGTGCGACGATCTGGGCGGAGAGTTCTGCAAGGCCACCTGATCCCATTCCCATCCATGGAGAATTGGAGTCTTCTATCATCCTTCCTCCTCTGCTCCACTACCTTAATTCCATGTAGCTACAGATTTATATGTTAATCATCATGTAATGGTACATATCTCCTTGTTAATAAGGCACGCTAGTCTAGCTCCTCAAAATGATTTACAATAATATAATATTTACATACATATAATACACTTACTCCATCGAACAATACCTCTGTTATCTCATGGTTACTTCCCATGATCCCATCATCAACACCAACATTCATCACACTTTGCTGCGTTAGAGCAGGTACAATGGCAGGCTATAAGCCAGCTACAAACATATTTTACGAAGATAAATCAAGAGAGAGAAGAGCAACGGGCTACAGATTTGTAGCCAGCTGTAGCACGGACTCCAAGACGCAGTGTGTCTATGACAGGTGGGACTAGATATTAATAGTGTAGTATGTAACTATTGTATGAATGGGCTATTAGATTGACTATAGATGAATTGGAGCTAGTAGTTGGCTATACTATTGAACTTGCTCTTATATAGCAACAGGTACAGTATATGAATTAATTATCTCACAACTATTGGAAAGTTGGCGCCAGAAAACTGAGGGAGCACTGAAACAAATTTGTTGTGCGGAAACATTTATATTAAAAAAAACATATATTATGGACATATGTGATTACCTATAGATCAGCTCTAATCTGCGCCGGCCTCTCCGTCGTACTTGGGACCTGCCAATCCAGATACCTGTCAATGTTATCAAAACTACCTCCAGGGCAGACAACAGTGTCCAGAGAAGGCTATTCACCTAGACCAGGAGCAAATACATCATCCGGATACTTCCTCCGGTTATTCACCTAAAGCATTTCCCCTCGCTTGTTGTCATGGAGGCAATATGACAATATGAGTCATGGACGCTTTGCCAAACTTACCTGGAATCAATCAGCAACGGGCCGGAGCACAATATATGTCGATACCTGCTGCATAGTGCATACACTAGTGAGTACTATATGACAAAGAAATTGAAGTGTGACGCCAACACTATAACTCGTGACATTATATAGGCTGGAGATAAATATTTATGCATGTCTTTCCGAACGCAATAACTATATTCACGAATTTTTGTGTGTAACAA
CDS Sequence
- >LOC_Os01g01340.2 CDS ATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAA
- >LOC_Os01g01340.1 CDS ATGCAGACCGCTGCTAGCAGTGTCGTTGGATTGTCGGCCGTGTTGCCCGCTGCTGTGAAGGGGCGCAGCCTGCAGATTCAGGCTCCTCGCCGTGTTGCGTTGCGCGTTCGTGCGGCGGCGGCGGCGGTGGCAGTGGAGGCTGCGGAGGTGGACTACAGCTCTAACATCTCGGTGTTTCCGATGGAGGCGTGCGACCTCATCGGCGGCGAGGCGTGCAACGTGCAGATGTACCCAGAGGCCAAGCTCTCATCATCGGCTGCTGTTGCTGTTTCTCGTGCGGCGGCGGAGGAAGTCGACAGGGACTACCTATCCTACGACGAGCCCACCACGTAA
Protein Sequence
- >LOC_Os01g01340.2 protein MQTAASSVVGLSAVLPAAVKGRSLQIQAPRRVALRVRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTT*
- >LOC_Os01g01340.1 protein MQTAASSVVGLSAVLPAAVKGRSLQIQAPRRVALRVRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTT*