Gene Details:
- MSU gene ID: LOC_Os01g04814
- RAPdb gene ID: Os01g0141100
- Gene Symbol: OsSKD1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- The Multivesicular Bodies (MVBs)-Localized AAA ATPase LRD6-6 Inhibits Immunity and Cell Death Likely through Regulating MVBs-Mediated Vesicular Trafficking in Rice . DOI: 10.1371/journal.pgen.1006311 ; PMID: 27618555
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g04814.3 cDNA ACGCTTCTCCCTTCTCCTCTTTTCCCTTTTTTTCCCCTCTACATCTTCCTTCCCCTTTCCTCCTCCTCCTCGTCTTCTCCTCCTCCCCACCGCGTCAAACCCCACCCCGAAGCAACCGCCGCCGCCGCCGAATCCGCCACCGGCGACCCCAATCCGCGCCGCCGGGGCCCGATCCCCACTCCGATCCGCCGTAATCCGGCCGGCCCCCCCGCGCGCGCGCGGCCGGCGGCGGCGCCGCCTTCGCCCCCGATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCACTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAACTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGATGATTAGCAAGATTTATTTCCTGTTATGTAGATCCTTCCACCACCAATCTCAAGGACAGATTTCGAGAAAGTCCTCGCCAGGCAGAGACCGACAGTGAGCAAGAAAGACTTGGAGGTGCACGAAAGGTTTACAAAAGAATTTGGCGAGGAGGGTTGACAAGATTATGCGCACTCACTTATGCATAGCTGCTCCACAGAAATGTATATTTTATGACTTCGATTGTTCTGGTTGGAAGTTGGATTCACAGATTTGTACAATTGATAGCCTAACTATGATTAATTACAACCTGTTTATTGCGTTAGGCTATCATTGCTCCTCTGTCGTCAACTTATTTCATTTTTACTGTCACTTATACTTGAAATTTTCCACAAGTGTATTAATTAAGGAATAATACTTAACGTGGAGCCCTTGTGGTGCAGCTTGTATAGTTTGTTCTCCTCTGGTTTCCGATTCCTGTCATTTTTCGGTTCTATTCAGTGCTTGTTCTTTGCCC
- >LOC_Os01g04814.4 cDNA ACGCTTCTCCCTTCTCCTCTTTTCCCTTTTTTTCCCCTCTACATCTTCCTTCCCCTTTCCTCCTCCTCCTCGTCTTCTCCTCCTCCCCACCGCGTCAAACCCCACCCCGAAGCAACCGCCGCCGCCGCCGAATCCGCCACCGGCGACCCCAATCCGCGCCGCCGGGGCCCGATCCCCACTCCGATCCGCCGTAATCCGGCCGGCCCCCCCGCGCGCGCGCGGCCGGCGGCGGCGCCGCCTTCGCCCCCGATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCACTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAACTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGATGATTAGCAAGATTTATTTCCTGTTATGTAGATCCTTCCACCACCAATCTCAAGGACAGATTTCGAGAAAGTCCTCGCCAGGCAGAGACCGACAGTGAGCAAGAAAGACTTGGAGGTGCACGAAAGGTTTACAAAAGAATTTGGCGAGGAGGGTTGACAAGATTATGCGCACTCACTTATGCATAGCTGCTCCACAGAAATGTATATTTTATGACTTCGATTGTTCTGGTTGGAAGTTGGATTCACAGATTTGTACAATTGATAGCCTAACTATGATTAATTACAACCTGTTTATTGCGTTAGGCTATCATTGCTCCTCTGTCGTCAACTTATTTCATTTTTACTGTCACTTATACTTGAAATTTTCCACAAGTGTATTAATTAAGGAATAATACTTAACGTGGAGCCCTTGTGGTGCAGCTTGTATAGTTTGTTCTCCTCTGGTTTCCGATTCCTGTCATTTTTCGGTTCTATTCAGTGCTTGTTCTTTGCCC
- >LOC_Os01g04814.1 cDNA ACGCTTCTCCCTTCTCCTCTTTTCCCTTTTTTTCCCCTCTACATCTTCCTTCCCCTTTCCTCCTCCTCCTCGTCTTCTCCTCCTCCCCACCGCGTCAAACCCCACCCCGAAGCAACCGCCGCCGCCGCCGAATCCGCCACCGGCGACCCCAATCCGCGCCGCCGGGGCCCGATCCCCACTCCGATCCGCCGTAATCCGGCCGGCCCCCCCGCGCGCGCGCGGCCGGCGGCGGCGCCGCCTTCGCCCCCGATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCACTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAACTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGATGATTAGCAAGATTTATTTCCTGTTATGTAGATCCTTCCACCACCAATCTCAAGGACAGATTTCGAGAAAGTCCTCGCCAGGCAGAGACCGACAGTGAGCAAGAAAGACTTGGAGGTGCACGAAAGGTTTACAAAAGAATTTGGCGAGGAGGGTTGACAAGATTATGCGCACTCACTTATGCATAGCTGCTCCACAGAAATGTATATTTTATGACTTCGATTGTTCTGGTTGGAAGTTGGATTCACAGATTTGTACAATTGATAGCCTAACTATGATTAATTACAACCTGTTTATTGCGTTAGGCTATCATTGCTCCTCTGTCGTCAACTTATTTCATTTTTACTGTCACTTATACTTGAAATTTTCCACAAGTGTATTAATTAAGGAATAATACTTAACGTGGAGCCCTTGTGGTGCAGCTTGTATAGTTTGTTCTCCTCTGGTTTCCGATTCCTGTCATTTTTCGGTTCTATTCAGTGCTTGTTCTTTGCCC
CDS Sequence
- >LOC_Os01g04814.3 CDS ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCACTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAACTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGA
- >LOC_Os01g04814.4 CDS ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCACTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAACTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGA
- >LOC_Os01g04814.1 CDS ATGTACAGCAACTTCAAGGAGCAGGCGATCGAGTACGTGAAGCAGGCGGTGCAGGAGGACAATGCCGGCAACTACGTCAAGGCGTTCCCGCTCTACATGAACGCGCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCGCCAAGTTCACCGAGTACCTCCGCCGCGCCGAGGAGATCCGCGCGGTCCTCGATGAGGGGGGTGGGGGTGGTGGCGCCAACGGCGGCGACGCGGCCGTCGCCACGCGGCCCAAGACCAAGGGTAAGGATGGGGAGGGGGGTGGGGATGATTCCGAGCAGTCCAAGCTGAGGGCTGGACTCAACTCCGCCATCATCACCGAGAAGCCCAACATCAAGTGGAACGATGTCGCCGGCCTCGAGAGCGCCAAGCAAGCGCTGCAGGAGGCCGTCATATTGCCTGTCAAGTTCCCGCAGTTCTTTACGGGTAAACGGAGACCATGGAGGGCTTTTCTTTTGTATGGTCCACCAGGAACAGGAAAGTCTTATTTGGCTAAAGCTGTTGCAACTGAGGCTGATTCTACATTTTTCAGTATATCTTCATCAGACCTTGTTTCAAAATGGATGGGAGAGAGTGAAAAACTTGTTGCAAACCTTTTCCAAATGGCTCGAGAAAACGCTCCTTCCATTATCTTCATTGATGAAATTGATTCATTGTGTGGTCAACGAGGAGAAGGAAATGAGAGTGAAGCTTCTAGGAGAATCAAAACTGAACTTCTTGTGCAAATGCAGGGTGTTGGCCATAATGATGACAAAGTACTGGTTCTTGCTGCTACAAACACGCCATATGCTCTAGACCAGGCTGTGCGCCGGCGCTTTGATAAACGTATTTACATTCCACTACCCGACCTGAAAGCAAGGCAACATATGTTTAAGGTCCATCTCGGGGATACACCACACAACTTAAATGAAAGTGATTTTGAGAACTTGGCTCGTCGAACAGACGGGTTTTCTGGTTCGGATATTGCTGTTTGTGTAAAGGATGTGTTATTTGAACCTGTCCGCAAAACACAGGATGCCATGTTCTTCTTTAAGGCTGATGGTGATATGTGGATGCCTTGTGGACCAAAGCAATCTGGTGCCGTACAAACAACCATGCAGGAGCTCGCATCCAAGGGCCTTGCAGCAAAGGTAAGATTGATTGACATTTCCTCCACTGCGCATGTTAGAAGAGGCTTCTGA
Protein Sequence
- >LOC_Os01g04814.3 protein MYSNFKEQAIEYVKQAVQEDNAGNYVKAFPLYMNALEYFKTHLKYEKNPKIKEAITAKFTEYLRRAEEIRAVLDEGGGGGGANGGDAAVATRPKTKGKDGEGGGDDSEQSKLRAGLNSAIITEKPNIKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVANLFQMARENAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDDKVLVLAATNTPYALDQAVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFENLARRTDGFSGSDIAVCVKDVLFEPVRKTQDAMFFFKADGDMWMPCGPKQSGAVQTTMQELASKGLAAKVRLIDISSTAHVRRGF*
- >LOC_Os01g04814.4 protein MYSNFKEQAIEYVKQAVQEDNAGNYVKAFPLYMNALEYFKTHLKYEKNPKIKEAITAKFTEYLRRAEEIRAVLDEGGGGGGANGGDAAVATRPKTKGKDGEGGGDDSEQSKLRAGLNSAIITEKPNIKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVANLFQMARENAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDDKVLVLAATNTPYALDQAVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFENLARRTDGFSGSDIAVCVKDVLFEPVRKTQDAMFFFKADGDMWMPCGPKQSGAVQTTMQELASKGLAAKVRLIDISSTAHVRRGF*
- >LOC_Os01g04814.1 protein MYSNFKEQAIEYVKQAVQEDNAGNYVKAFPLYMNALEYFKTHLKYEKNPKIKEAITAKFTEYLRRAEEIRAVLDEGGGGGGANGGDAAVATRPKTKGKDGEGGGDDSEQSKLRAGLNSAIITEKPNIKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESEKLVANLFQMARENAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDDKVLVLAATNTPYALDQAVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFENLARRTDGFSGSDIAVCVKDVLFEPVRKTQDAMFFFKADGDMWMPCGPKQSGAVQTTMQELASKGLAAKVRLIDISSTAHVRRGF*