Gene Details:
- MSU gene ID: LOC_Os01g05490
- RAPdb gene ID: Os01g0147900
- Gene Symbol: TPI OsTPI1.1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- A single TPI mRNA species of about 1100 nucleotides was detected by gel blot hybridization analysis of RNA isolated from root, culm, and leaf tissues, indicating that its expression is ubiquitous.
- Based on sequence comparison and molecular analysis, we propose that the chloroplast-located TPI may be encoded by divergent structural nuclear genes in rice.
Function-related keywords:
- culm , root , chloroplast , leaf
Literature:
- Expressed sequence tags from cultured cells of rice (Oryza sativa L.) under stressed conditions: analysis of transcripts of genes engaged in ATP-generating pathways . DOI: 10.1007/BF00043875 ; PMID: 8049371
- Cytosolic triosephosphate isomerase is a single gene in rice . DOI: 10.1104/pp.101.2.683 ; PMID: 8278510
- A Cytosolic Triosephosphate Isomerase Is a Key Component in XA3/XA26-Mediated Resistance . DOI: 10.1104/pp.18.00348 ; PMID: 30158116
Related News:
Gene Resources:
- NCBI ID: M87064
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os01g05490.2 cDNA ATATTATCCTGTCCATGGTGTTTTTCTTCCTCCTCCACAAAAACCAAAATCCAATCTCCAGCTCTCTTCCCCCCCCCCCCCCCCCCCCCCGCGTCCAGTTCCATCTAATCAGCTTCTCGTCGAGATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGATAAGCACACAAAGTGTTCATTCATGAACTTCTGCACGTTCCATAATTGTTACCTATGCTCTAGATAAAATATCTTGTTTAAACAACCATCTGGTTTGTATTATTGTATCAGGTGCATGATGGCCTGAGGAAGTGGCTCGCTGCTAATGTCAGTGCAGAGGTTGCTGAATCAACAAGGATCATCTATGGAGGTTCCGTAACTGGTGCGAACTGCAAGGAGCTGGCAGCAAAGCCTGATGTTGATGGTTTTCTCGTCGGTGGTGCTTCATTGAAGCCTGAATTCATCGACATCATCAACTCCGCCACCGTGAAGTCCGCCTAAGATCTTCACCCCATTCACCTTCGGCGTGGGAAGATGTCTGAAGAGGATCATACCTTTTTCTGTGCTTATGTAATGCTAGTAGTTTTGTGCTGGAGCAGCTACTCTTTTTCCTCCCCTTCACTTCCCTGAAGCTACCTGCAGCTTGAGCAATGCTAATAATGCACACCACTGAACATACTACCATACCAATAATGTTTAGCTCCTTTTGTCGTGAGTTATTATCATGTGAGTTTCAGATCAGATTTCACTGGTCCCTTCACCTATTCTTGCTGGCATATCAGTCTGATGAATCAGGCATCAATTCTGGTTTCTCTGTGTTATGGTCTGCAATGTCTAGTGAGGTTTAAGGTTTTTGCATCTTTTGGTCCCCATGATTGATTCCAAGTAACAGGCTAACTGCCATAGTACCTCAAATTTTGGAATATCTTGTGTTGTGTGCTGATCTGCTCAGTTGGCACAATCCTCTGAACGCAACCGTTGAGCAAACTTTGCACGGTTGCTGCCAATCAATTTGAGAATGGACCAATCTTTCGTCAG
- >LOC_Os01g05490.1 cDNA ATATTATCCTGTCCATGGTGTTTTTCTTCCTCCTCCACAAAAACCAAAATCCAATCTCCAGCTCTCTTCCCCCCCCCCCCCCCCCCCCCCGCGTCCAGTTCCATCTAATCAGCTTCTCGTCGAGATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGATAAGCACACAAAGTGTTCATTCATGAACTTCTGCACGTTCCATAATTGTTACCTATGCTCTAGATAAAATATCTTGTTTAAACAACCATCTGGTTTGTATTATTGTATCAGGTGCATGATGGCCTGAGGAAGTGGCTCGCTGCTAATGTCAGTGCAGAGGTTGCTGAATCAACAAGGATCATCTATGGAGGTTCCGTAACTGGTGCGAACTGCAAGGAGCTGGCAGCAAAGCCTGATGTTGATGGTTTTCTCGTCGGTGGTGCTTCATTGAAGCCTGAATTCATCGACATCATCAACTCCGCCACCGTGAAGTCCGCCTAAGATCTTCACCCCATTCACCTTCGGCGTGGGAAGATGTCTGAAGAGGATCATACCTTTTTCTGTGCTTATGTAATGCTAGTAGTTTTGTGCTGGAGCAGCTACTCTTTTTCCTCCCCTTCACTTCCCTGAAGCTACCTGCAGCTTGAGCAATGCTAATAATGCACACCACTGAACATACTACCATACCAATAATGTTTAGCTCCTTTTGTCGTGAGTTATTATCATGTGAGTTTCAGATCAGATTTCACTGGTCCCTTCACCTATTCTTGCTGGCATATCAGTCTGATGAATCAGGCATCAATTCTGGTTTCTCTGTGTTATGGTCTGCAATGTCTAGTGAGGTTTAAGGTTTTTGCATCTTTTGGTCCCCATGATTGATTCCAAGTAACAGGCTAACTGCCATAGTACCTCAAATTTTGGAATATCTTGTGTTGTGTGCTGATCTGCTCAGTTGGCACAATCCTCTGAACGCAACCGTTGAGCAAACTTTGCACGGTTGCTGCCAATCAATTTGAGAATGGACCAATCTTTCGTCAG
CDS Sequence
- >LOC_Os01g05490.2 CDS ATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGA
- >LOC_Os01g05490.1 CDS ATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGTTCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGA
Protein Sequence
- >LOC_Os01g05490.2 protein MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVSFLY*
- >LOC_Os01g05490.1 protein MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVSFLY*