Gene Details:
- MSU gene ID: LOC_Os01g16400
- RAPdb gene ID: Os01g0269800
- Gene Symbol: NBS-LRR
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria . DOI: 10.1007/s12298-020-00911-1 ; PMID: 33424163
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g16400.1 cDNA ATGGAAGCCGCCGTGGTGAGCTCGACCGAGGGCGTGGTGCGCATCCTCCTGGCCAAGCTCGGCGAATTCCTCTCCGACAAGTACGTCCTCCTCAGCGGCGTCCGCCACGAGATCCAGGAGCTCAAGGACGACCTCGAGAGCATGAACGCCTGCCTCCGCGACCTCGCCGCCGTCGGCGACTACCACCAGTCCCAGCAGACTAGGACGTGGATGAAGCAGGTGAGGGAGGTGGCGTACGACGCGGAGGACTGCATCGACAGTTTCCGGTACCACGTCGGCGGCGACCGGAACCACGACGAGGGCCTCCTCGTCGTCGCCGGCTGGCTGCGCAGGACGGCGCTCCGGCCGCTGACGACGCTGCGGGCGATGTACAAGCTGGCCGTGGAGGTCCAGAGCCTCAAGGCCCGCGCGCTCAAGGTCAGCGAGCGGAGGCTCAGGTACAGGCTGGAGCCGCCCGCCGCGGCGTCGAGCTCCGGCGAGTACGCGCCCCGCTGCTACGACGACCTCGACCGTCGCCTTCCGGCGCTCAGCGTCGACGAGTCCCGCCTCGTCGGCGTCCGCAGCAAGACCAGAGCCATCCTCAAGCTGCTGGAACACAAGGACGACGGCGACGACGACGGCTTGGCTCGCCGGAAGGTGGTCGCCGTCGTCGGCTTCGGCGGCCTGGGCAAGACGACGCTGGCGGCGATGGTGTACAAGAGCCCGGCGGTGCAGGGGATCCATCACAGGGCGTTCGTGACGGTGACCCGGAGCTGCAACCTTCGCGCCATGCTGGAGTCGCTGCTGGAGCAGCTGTTCGCGCCGGCGCGAGATCCACGCTGCTCCAGGAAGGAGATCATGGCCATGGAAAAGGATGAAATACTCAGAGGCATCGAAACCAAGGACATTCCCCAACTCCTCGCCCATTGCAGTACTCATCTGAGCGACAAGAGATACTTTATTGTTGTTGACGACTTATGGAGTCTGGAGGACTGGGCAAGCTTGAAGCCAGCCTTTCCCGACAATGACAAGCATAGTCGAATAATAATCACTACAAGGAACCGTCAGGTTGCTGAGAGCTGCTGCTCGCTTCCCGGCGATCGCGTTCACTTCATGGATGTTCTGCCAAACGATCAGTCCAGAGAGCTGTTCTTCAAGACGGTGTTCCAGAAGGAGCATTGCCCGTCGGAGTACCGAAGCCTGGAGGGCATCTCCGGTGACATCTTGACCAAATGCGGCGGCCTGCCGCTGGCCATAGTCAGTGTGGGAGGAATGCTGGCCCAGGCGGAGAACAAGACGCCGGTGGAGTGGACGAAGGTGTGCGGCAAGCTGGGCTCCGGGCTGAGCACGAGCGCGGCGGTGAGGGGGATGAGGCGGATACTGTCGCTGAGCTACCACGACCTGCCCTACCACCTCAAGGCTTGCTTCCTCTACCTCAGCGTCTTCCGCGAGGGGTACGAGATCAAGCGGGGGCCCCTGGTGCGGCGATGGGCCGCCGAGGGGTTCGTTGGCGGTGGGCGGGAGTGGACCCCCGAGGAGGCCGCCGGCAAGTACATAGACGAGTTCGTTGGCAGGAGCATCGTCACACCCACTCGGGTCGCCACCAATGGCGTGGTTAGGTGTTGTAAGGTGCACGACATCATGCTGGAGGTGATGACGGCCAAGTGCGTGGAGGAGAACTTCATCTCCTTGTTGGGGAGCGTGACCAGCTACGGGCGTCACCAACATACCGCGGCTACGACGACTGGGCATGACAAGATCCGGCGGCTATCTGTCCATGGCTCCCACATGCCGCAGGGGCAACAATCTAGGAGTGGTGGTGGTGATGAGGATATCTTTAGGTTTAGGAGGAGAAGGAAGAAGGGCGAGGGCGAGGGTCAGGACGACGTCTTGTCGTCCGTAGACTTGTCTTGCGCCCGCTCGCTGTTGATGCTCCGGTGCATCGAGAAACCACTGCCATCAATTAGCTTCAAGCGCCTAAAGCTCCTCAGGGTGCTGGATCTCGAAGGTTGTCGTTGGCTAAGCAGCCGTGAATTGGACGACATCTGCAAGCTCTCCCTCTTGAGGTACCTAAGCCTTAGGGACACAGGCGTGCAGCGGCTGCCACGGTCGGTCGGGAGACTGAAACAGCTCATGACACTGGACGTCAGGGAAACCGATGTGAGGGAGTTGCCGGAGACGATCACCCGGCTAGGACACATGAGGCATCTTCTATCAGGCAGGTACAGATACTACACAAGGAGCCACCGTGTCAAGCTCTTTGAGCCATTTGAGGCCATGACAATACCACCTGGCTTGAGCGCCATGGAGTCCCTCCAAACCATTGCCCATGCCAACGTCACGTCGAGCGGCATCGCCATGGGCGAGTTGGGTGACCTACCTAGCCTAACCAAGCTCTGCGTCATGAACTGTGAAAAGGGGCCTAACAAATGGAAGCCATTCATTGTGTCCCTCAACAAACTCAGCTACTCCCTCCGCAGCTTGTCTATCCTCCACTGGTTAAATGAGGACGCTGGCCTCGAGGAACTCCTAGATCTAGACTCGCCACCCATCTTCCTCGAGAAGTTCTTCCTCTGGGGCAAGCTTAGCATGTTGCCTCCTTGGGTCTCACACCTCGGCAATCTGGTCGACCTCTCGCTCCGAGAGAACTTCCTTGATGGCAAGGAGGTCATCGAGCAGCTAGGCAAGCTCCCTAGCCTCCTCTCCCTCAAGCTCTACTACCAGTCATATATGGGGAGAGAGCTCCACTTCCGGGAGAAGCTATTCCCGAGGCTCAAGCAGCTGATCGTGGACAATATGCCCAACCTTGATGAGCTTAGCTTCCAAGGAGGCGCCCCCGAGCTTGAGAGGCTCACGCTCGCCGTCCTCAAGGAGCCTGCAGATGGCATCTCCGGCATTGACAAGCTCCCAAGGCTCAAGGAGGTTGAGTTCTTTGGCCATGTCATCGTCGACTCCGTGGTGGAGAGCATGGTAGCTGTGTGCAAGAAGCATCCTAACAAGCCGAGAGTTTACAGGGGAGATCGACCAATGGAGATGGACTCTGAATTGTCCAGCTGA
CDS Sequence
- >LOC_Os01g16400.1 CDS ATGGAAGCCGCCGTGGTGAGCTCGACCGAGGGCGTGGTGCGCATCCTCCTGGCCAAGCTCGGCGAATTCCTCTCCGACAAGTACGTCCTCCTCAGCGGCGTCCGCCACGAGATCCAGGAGCTCAAGGACGACCTCGAGAGCATGAACGCCTGCCTCCGCGACCTCGCCGCCGTCGGCGACTACCACCAGTCCCAGCAGACTAGGACGTGGATGAAGCAGGTGAGGGAGGTGGCGTACGACGCGGAGGACTGCATCGACAGTTTCCGGTACCACGTCGGCGGCGACCGGAACCACGACGAGGGCCTCCTCGTCGTCGCCGGCTGGCTGCGCAGGACGGCGCTCCGGCCGCTGACGACGCTGCGGGCGATGTACAAGCTGGCCGTGGAGGTCCAGAGCCTCAAGGCCCGCGCGCTCAAGGTCAGCGAGCGGAGGCTCAGGTACAGGCTGGAGCCGCCCGCCGCGGCGTCGAGCTCCGGCGAGTACGCGCCCCGCTGCTACGACGACCTCGACCGTCGCCTTCCGGCGCTCAGCGTCGACGAGTCCCGCCTCGTCGGCGTCCGCAGCAAGACCAGAGCCATCCTCAAGCTGCTGGAACACAAGGACGACGGCGACGACGACGGCTTGGCTCGCCGGAAGGTGGTCGCCGTCGTCGGCTTCGGCGGCCTGGGCAAGACGACGCTGGCGGCGATGGTGTACAAGAGCCCGGCGGTGCAGGGGATCCATCACAGGGCGTTCGTGACGGTGACCCGGAGCTGCAACCTTCGCGCCATGCTGGAGTCGCTGCTGGAGCAGCTGTTCGCGCCGGCGCGAGATCCACGCTGCTCCAGGAAGGAGATCATGGCCATGGAAAAGGATGAAATACTCAGAGGCATCGAAACCAAGGACATTCCCCAACTCCTCGCCCATTGCAGTACTCATCTGAGCGACAAGAGATACTTTATTGTTGTTGACGACTTATGGAGTCTGGAGGACTGGGCAAGCTTGAAGCCAGCCTTTCCCGACAATGACAAGCATAGTCGAATAATAATCACTACAAGGAACCGTCAGGTTGCTGAGAGCTGCTGCTCGCTTCCCGGCGATCGCGTTCACTTCATGGATGTTCTGCCAAACGATCAGTCCAGAGAGCTGTTCTTCAAGACGGTGTTCCAGAAGGAGCATTGCCCGTCGGAGTACCGAAGCCTGGAGGGCATCTCCGGTGACATCTTGACCAAATGCGGCGGCCTGCCGCTGGCCATAGTCAGTGTGGGAGGAATGCTGGCCCAGGCGGAGAACAAGACGCCGGTGGAGTGGACGAAGGTGTGCGGCAAGCTGGGCTCCGGGCTGAGCACGAGCGCGGCGGTGAGGGGGATGAGGCGGATACTGTCGCTGAGCTACCACGACCTGCCCTACCACCTCAAGGCTTGCTTCCTCTACCTCAGCGTCTTCCGCGAGGGGTACGAGATCAAGCGGGGGCCCCTGGTGCGGCGATGGGCCGCCGAGGGGTTCGTTGGCGGTGGGCGGGAGTGGACCCCCGAGGAGGCCGCCGGCAAGTACATAGACGAGTTCGTTGGCAGGAGCATCGTCACACCCACTCGGGTCGCCACCAATGGCGTGGTTAGGTGTTGTAAGGTGCACGACATCATGCTGGAGGTGATGACGGCCAAGTGCGTGGAGGAGAACTTCATCTCCTTGTTGGGGAGCGTGACCAGCTACGGGCGTCACCAACATACCGCGGCTACGACGACTGGGCATGACAAGATCCGGCGGCTATCTGTCCATGGCTCCCACATGCCGCAGGGGCAACAATCTAGGAGTGGTGGTGGTGATGAGGATATCTTTAGGTTTAGGAGGAGAAGGAAGAAGGGCGAGGGCGAGGGTCAGGACGACGTCTTGTCGTCCGTAGACTTGTCTTGCGCCCGCTCGCTGTTGATGCTCCGGTGCATCGAGAAACCACTGCCATCAATTAGCTTCAAGCGCCTAAAGCTCCTCAGGGTGCTGGATCTCGAAGGTTGTCGTTGGCTAAGCAGCCGTGAATTGGACGACATCTGCAAGCTCTCCCTCTTGAGGTACCTAAGCCTTAGGGACACAGGCGTGCAGCGGCTGCCACGGTCGGTCGGGAGACTGAAACAGCTCATGACACTGGACGTCAGGGAAACCGATGTGAGGGAGTTGCCGGAGACGATCACCCGGCTAGGACACATGAGGCATCTTCTATCAGGCAGGTACAGATACTACACAAGGAGCCACCGTGTCAAGCTCTTTGAGCCATTTGAGGCCATGACAATACCACCTGGCTTGAGCGCCATGGAGTCCCTCCAAACCATTGCCCATGCCAACGTCACGTCGAGCGGCATCGCCATGGGCGAGTTGGGTGACCTACCTAGCCTAACCAAGCTCTGCGTCATGAACTGTGAAAAGGGGCCTAACAAATGGAAGCCATTCATTGTGTCCCTCAACAAACTCAGCTACTCCCTCCGCAGCTTGTCTATCCTCCACTGGTTAAATGAGGACGCTGGCCTCGAGGAACTCCTAGATCTAGACTCGCCACCCATCTTCCTCGAGAAGTTCTTCCTCTGGGGCAAGCTTAGCATGTTGCCTCCTTGGGTCTCACACCTCGGCAATCTGGTCGACCTCTCGCTCCGAGAGAACTTCCTTGATGGCAAGGAGGTCATCGAGCAGCTAGGCAAGCTCCCTAGCCTCCTCTCCCTCAAGCTCTACTACCAGTCATATATGGGGAGAGAGCTCCACTTCCGGGAGAAGCTATTCCCGAGGCTCAAGCAGCTGATCGTGGACAATATGCCCAACCTTGATGAGCTTAGCTTCCAAGGAGGCGCCCCCGAGCTTGAGAGGCTCACGCTCGCCGTCCTCAAGGAGCCTGCAGATGGCATCTCCGGCATTGACAAGCTCCCAAGGCTCAAGGAGGTTGAGTTCTTTGGCCATGTCATCGTCGACTCCGTGGTGGAGAGCATGGTAGCTGTGTGCAAGAAGCATCCTAACAAGCCGAGAGTTTACAGGGGAGATCGACCAATGGAGATGGACTCTGAATTGTCCAGCTGA
Protein Sequence
- >LOC_Os01g16400.1 protein MEAAVVSSTEGVVRILLAKLGEFLSDKYVLLSGVRHEIQELKDDLESMNACLRDLAAVGDYHQSQQTRTWMKQVREVAYDAEDCIDSFRYHVGGDRNHDEGLLVVAGWLRRTALRPLTTLRAMYKLAVEVQSLKARALKVSERRLRYRLEPPAAASSSGEYAPRCYDDLDRRLPALSVDESRLVGVRSKTRAILKLLEHKDDGDDDGLARRKVVAVVGFGGLGKTTLAAMVYKSPAVQGIHHRAFVTVTRSCNLRAMLESLLEQLFAPARDPRCSRKEIMAMEKDEILRGIETKDIPQLLAHCSTHLSDKRYFIVVDDLWSLEDWASLKPAFPDNDKHSRIIITTRNRQVAESCCSLPGDRVHFMDVLPNDQSRELFFKTVFQKEHCPSEYRSLEGISGDILTKCGGLPLAIVSVGGMLAQAENKTPVEWTKVCGKLGSGLSTSAAVRGMRRILSLSYHDLPYHLKACFLYLSVFREGYEIKRGPLVRRWAAEGFVGGGREWTPEEAAGKYIDEFVGRSIVTPTRVATNGVVRCCKVHDIMLEVMTAKCVEENFISLLGSVTSYGRHQHTAATTTGHDKIRRLSVHGSHMPQGQQSRSGGGDEDIFRFRRRRKKGEGEGQDDVLSSVDLSCARSLLMLRCIEKPLPSISFKRLKLLRVLDLEGCRWLSSRELDDICKLSLLRYLSLRDTGVQRLPRSVGRLKQLMTLDVRETDVRELPETITRLGHMRHLLSGRYRYYTRSHRVKLFEPFEAMTIPPGLSAMESLQTIAHANVTSSGIAMGELGDLPSLTKLCVMNCEKGPNKWKPFIVSLNKLSYSLRSLSILHWLNEDAGLEELLDLDSPPIFLEKFFLWGKLSMLPPWVSHLGNLVDLSLRENFLDGKEVIEQLGKLPSLLSLKLYYQSYMGRELHFREKLFPRLKQLIVDNMPNLDELSFQGGAPELERLTLAVLKEPADGISGIDKLPRLKEVEFFGHVIVDSVVESMVAVCKKHPNKPRVYRGDRPMEMDSELSS*