Gene Details:
- MSU gene ID: LOC_Os01g21034
- RAPdb gene ID: Os01g0312500
- Gene Symbol: PME42
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Knockout of PME40 also resulted in early diurnal flower opening, whereas overexpression of PME42 delayed diurnal flower opening.
Function-related keywords:
Literature:
- Methylesterification of cell-wall pectin controls the diurnal flower-opening times in rice . DOI: 10.1016/j.molp.2022.04.004 ; PMID: 35418344
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g21034.2 cDNA ATTACTACTCCCCCTCCAGCTAGCTCTTGCTGCTCAGTGCTCAGTGCTCACTGTGACAGCACAATGCCACCCTTACATGCCGGGAGACCGGGGCCTCTGCTCGTGCTCCTCGCCGTCACACTCGCCGCCGCCGCCGCCACCGCCGTGGGTGCGTCGTCCGACACGGCCCCCTTCTACCCGTCCGCGGAGGAGGCCGCCGCCGCGCACTGCGAGGGCACGCTCTACCCGGAGCTCTGCCTGTCCACGCTCGCCGACATCCCGGACCTCCACACCAAGTCCCTCCCGGACGTCATCTGCGGCACCGTCAACCGCACCAAGGACGCCGTCGCCGCCACCTCCTACAACTGCTCGCACTACATCAACAGCAAGTACCTCACGCCGCGCGACCGCCTCGCCATCTCCGACTGCATGGAGCTCCTCGACACCACCATGGACGAGCTCCAGGCCACCACCAGCGACCTCGAGTCGCCGGCCGTCGCCGGCGGCAACAATGGCTCGGCCTCGATGGCCGCCAAGCGCGTCACCATGGACCACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTCGACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCCCGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGGATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACGCAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGGCCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTGGCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCGAACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAGGTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGGAATTTGCATGTTGTGTGTCTCTTTCCGTAATCAAAAAGTATTAGCTCGATTGTGAGTACACATGCGCCTTCTGTGGACTGACGAATACATACACGATGGCATGTCGACGTCCACCCCTGTATTCGTCAAGTCATCAAGGCCGGAACCAAAGTGATGTGACTACCCCGCTCGCGCACCAGTGTGTGCTTGAAATACTTTTTTTTTCTAAAAAAAACATAGTTTTTTTCCGAATGACTGGACTAACAAATCCTCAGATTTA
- >LOC_Os01g21034.1 cDNA ATTACTACTCCCCCTCCAGCTAGCTCTTGCTGCTCAGTGCTCAGTGCTCACTGTGACAGCACAATGCCACCCTTACATGCCGGGAGACCGGGGCCTCTGCTCGTGCTCCTCGCCGTCACACTCGCCGCCGCCGCCGCCACCGCCGTGGGTGCGTCGTCCGACACGGCCCCCTTCTACCCGTCCGCGGAGGAGGCCGCCGCCGCGCACTGCGAGGGCACGCTCTACCCGGAGCTCTGCCTGTCCACGCTCGCCGACATCCCGGACCTCCACACCAAGTCCCTCCCGGACGTCATCTGCGGCACCGTCAACCGCACCAAGGACGCCGTCGCCGCCACCTCCTACAACTGCTCGCACTACATCAACAGCAAGTACCTCACGCCGCGCGACCGCCTCGCCATCTCCGACTGCATGGAGCTCCTCGACACCACCATGGACGAGCTCCAGGCCACCACCAGCGACCTCGAGTCGCCGGCCGTCGCCGGCGGCAACAATGGCTCGGCCTCGATGGCCGCCAAGCGCGTCACCATGGACCACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTCGACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCCCGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGGATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACGCAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGGCCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTGGCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCGAACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAGGTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGGAATTTGCATGTTGTGTGTCTCTTTCCGTAATCAAAAAGTATTAGCTCGATTGTGAGTACACATGCGCCTTCTGTGGACTGACGAATACATACACGATGGCATGTCGACGTCCACCCCTGTATTCGTCAAGTCATCAAGGCCGGAACCAAAGTGATGTGACTACCCCGCTCGCGCACCAGTGTGTGCTTGAAATACTTTTTTTTTCTAAAAAAAACATAGTTTTTTTCCGAATGACTGGACTAACAAATCCTCAGATTTA
- >LOC_Os01g21034.3 cDNA ATTACTACTCCCCCTCCAGCTAGCTCTTGCTGCTCAGTGCTCAGTGCTCACTGTGACAGCACAATGCCACCCTTACATGCCGGGAGACCGGGGCCTCTGCTCGTGCTCCTCGCCGTCACACTCGCCGCCGCCGCCGCCACCGCCGTGGGTGCGTCGTCCGACACGGCCCCCTTCTACCCGTCCGCGGAGGAGGCCGCCGCCGCGCACTGCGAGGGCACGCTCTACCCGGAGCTCTGCCTGTCCACGCTCGCCGACATCCCGGACCTCCACACCAAGTCCCTCCCGGACGTCATCTGCGGCACCGTCAACCGCACCAAGGACGCCGTCGCCGCCACCTCCTACAACTGCTCGCACTACATCAACAGCAAGTACCTCACGCCGCGCGACCGCCTCGCCATCTCCGACTGCATGGAGCTCCTCGACACCACCATGGACGAGCTCCAGGCCACCACCAGCGACCTCGAGTCGCCGGCCGTCGCCGGCGGCAACAATGGCTCGGCCTCGATGGCCGCCAAGCGCGTCACCATGGACCACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTCGACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCCCGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGGATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACGCAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGGCCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTGGCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCGAACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAGGTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGGAATTTGCATGTTGTGTGTCTCTTTCCGTAATCAAAAAGTATTAGCTCGATTGTGAGTACACATGCGCCTTCTGTGGACTGACGAATACATACACGATGGCATGTCGACGTCCACCCCTGTATTCGTCAAGTCATCAAGGCCGGAACCAAAGTGATGTGACTACCCCGCTCGCGCACCAGTGTGTGCTTGAAATACTTTTTTTTTCTAAAAAAAACATAGTTTTTTTCCGAATGACTGGACTAACAAATCCTCAGATTTA
CDS Sequence
- >LOC_Os01g21034.2 CDS ATGCCACCCTTACATGCCGGGAGACCGGGGCCTCTGCTCGTGCTCCTCGCCGTCACACTCGCCGCCGCCGCCGCCACCGCCGTGGGTGCGTCGTCCGACACGGCCCCCTTCTACCCGTCCGCGGAGGAGGCCGCCGCCGCGCACTGCGAGGGCACGCTCTACCCGGAGCTCTGCCTGTCCACGCTCGCCGACATCCCGGACCTCCACACCAAGTCCCTCCCGGACGTCATCTGCGGCACCGTCAACCGCACCAAGGACGCCGTCGCCGCCACCTCCTACAACTGCTCGCACTACATCAACAGCAAGTACCTCACGCCGCGCGACCGCCTCGCCATCTCCGACTGCATGGAGCTCCTCGACACCACCATGGACGAGCTCCAGGCCACCACCAGCGACCTCGAGTCGCCGGCCGTCGCCGGCGGCAACAATGGCTCGGCCTCGATGGCCGCCAAGCGCGTCACCATGGACCACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTCGACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCCCGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGGATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACGCAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGGCCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTGGCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCGAACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAGGTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGGAATTTGCATGTTGTGTGTCTCTTTCCGTAATCAAAAAGTATTAGCTCGATTGTGA
- >LOC_Os01g21034.1 CDS ATGCCACCCTTACATGCCGGGAGACCGGGGCCTCTGCTCGTGCTCCTCGCCGTCACACTCGCCGCCGCCGCCGCCACCGCCGTGGGTGCGTCGTCCGACACGGCCCCCTTCTACCCGTCCGCGGAGGAGGCCGCCGCCGCGCACTGCGAGGGCACGCTCTACCCGGAGCTCTGCCTGTCCACGCTCGCCGACATCCCGGACCTCCACACCAAGTCCCTCCCGGACGTCATCTGCGGCACCGTCAACCGCACCAAGGACGCCGTCGCCGCCACCTCCTACAACTGCTCGCACTACATCAACAGCAAGTACCTCACGCCGCGCGACCGCCTCGCCATCTCCGACTGCATGGAGCTCCTCGACACCACCATGGACGAGCTCCAGGCCACCACCAGCGACCTCGAGTCGCCGGCCGTCGCCGGCGGCAACAATGGCTCGGCCTCGATGGCCGCCAAGCGCGTCACCATGGACCACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTCGACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCCCGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGGATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACGCAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGGCCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTGGCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCGAACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAGGTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGGAATTTGCATGTTGTGTGTCTCTTTCCGTAATCAAAAAGTATTAGCTCGATTGTGA
- >LOC_Os01g21034.3 CDS ATGCCACCCTTACATGCCGGGAGACCGGGGCCTCTGCTCGTGCTCCTCGCCGTCACACTCGCCGCCGCCGCCGCCACCGCCGTGGGTGCGTCGTCCGACACGGCCCCCTTCTACCCGTCCGCGGAGGAGGCCGCCGCCGCGCACTGCGAGGGCACGCTCTACCCGGAGCTCTGCCTGTCCACGCTCGCCGACATCCCGGACCTCCACACCAAGTCCCTCCCGGACGTCATCTGCGGCACCGTCAACCGCACCAAGGACGCCGTCGCCGCCACCTCCTACAACTGCTCGCACTACATCAACAGCAAGTACCTCACGCCGCGCGACCGCCTCGCCATCTCCGACTGCATGGAGCTCCTCGACACCACCATGGACGAGCTCCAGGCCACCACCAGCGACCTCGAGTCGCCGGCCGTCGCCGGCGGCAACAATGGCTCGGCCTCGATGGCCGCCAAGCGCGTCACCATGGACCACGTCATGACGGAGCTCTCCGCCGCCATGACCAACCAGTACACCTGCCTCGACGGCTTCGACTACAAGGACGGGGAGAGGGTGCGTCATTACATGGAGTCCAGCATCCACCACGTCTCCCGCATGGTCAGCAACTCGCTCGCCATGGCCAAGAAGCTGCCCGGCGCCGGCGGCGGTGGGATGACCCCGTCATCGTCGTCGCCCGACACGGCGACGCAATCGGAGTCGTCAGAGACCACGCAGCGGCAGCCATTCATGGGGTACGGGCAGATGGCGAATGGGTTCCCGAAGTGGGTGAGGCCGGGAGACCGGCGGCTACTCCAAGCGCCGGCGTCGAGCATCACGCCCGACGCGGTGGTGGCGAAGGACGGGAGCGGCGGGTACACGACGGTGTCGGCGGCGGTGGCGGCGGCGCCGGCGAACTCGAACAAGAGGTACGTGATACACATCAAGGCCGGGGCGTACATGGAGAACGTGGAGGTGGGGAAGAGCAAGAAGAACCTGATGTTCATCGGCGACGGCATCGGCAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACGGCTCCACCACCTTCCGCTCCGCCACAGTCGGAATTTGCATGTTGTGTGTCTCTTTCCGTAATCAAAAAGTATTAGCTCGATTGTGA
Protein Sequence
- >LOC_Os01g21034.2 protein MPPLHAGRPGPLLVLLAVTLAAAAATAVGASSDTAPFYPSAEEAAAAHCEGTLYPELCLSTLADIPDLHTKSLPDVICGTVNRTKDAVAATSYNCSHYINSKYLTPRDRLAISDCMELLDTTMDELQATTSDLESPAVAGGNNGSASMAAKRVTMDHVMTELSAAMTNQYTCLDGFDYKDGERVRHYMESSIHHVSRMVSNSLAMAKKLPGAGGGGMTPSSSSPDTATQSESSETTQRQPFMGYGQMANGFPKWVRPGDRRLLQAPASSITPDAVVAKDGSGGYTTVSAAVAAAPANSNKRYVIHIKAGAYMENVEVGKSKKNLMFIGDGIGKTVIKASRNVVDGSTTFRSATVGICMLCVSFRNQKVLARL*
- >LOC_Os01g21034.1 protein MPPLHAGRPGPLLVLLAVTLAAAAATAVGASSDTAPFYPSAEEAAAAHCEGTLYPELCLSTLADIPDLHTKSLPDVICGTVNRTKDAVAATSYNCSHYINSKYLTPRDRLAISDCMELLDTTMDELQATTSDLESPAVAGGNNGSASMAAKRVTMDHVMTELSAAMTNQYTCLDGFDYKDGERVRHYMESSIHHVSRMVSNSLAMAKKLPGAGGGGMTPSSSSPDTATQSESSETTQRQPFMGYGQMANGFPKWVRPGDRRLLQAPASSITPDAVVAKDGSGGYTTVSAAVAAAPANSNKRYVIHIKAGAYMENVEVGKSKKNLMFIGDGIGKTVIKASRNVVDGSTTFRSATVGICMLCVSFRNQKVLARL*
- >LOC_Os01g21034.3 protein MPPLHAGRPGPLLVLLAVTLAAAAATAVGASSDTAPFYPSAEEAAAAHCEGTLYPELCLSTLADIPDLHTKSLPDVICGTVNRTKDAVAATSYNCSHYINSKYLTPRDRLAISDCMELLDTTMDELQATTSDLESPAVAGGNNGSASMAAKRVTMDHVMTELSAAMTNQYTCLDGFDYKDGERVRHYMESSIHHVSRMVSNSLAMAKKLPGAGGGGMTPSSSSPDTATQSESSETTQRQPFMGYGQMANGFPKWVRPGDRRLLQAPASSITPDAVVAKDGSGGYTTVSAAVAAAPANSNKRYVIHIKAGAYMENVEVGKSKKNLMFIGDGIGKTVIKASRNVVDGSTTFRSATVGICMLCVSFRNQKVLARL*