Gene Details:
- MSU gene ID: LOC_Os01g48920
- RAPdb gene ID: Os01g0681400
- Gene Symbol: OsATG6a
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Regulation of ATG6/Beclin-1 homologs by abiotic stresses and hormones in rice (Oryza sativa L.) . DOI: 10.4238/2012.August.17.3 ; PMID: 22930426
- Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.) . DOI: 10.1093/dnares/dsr024 ; PMID: 21795261
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g48920.1 cDNA AGTATTATGTTATTATCCCTGACAGGTGGGCTCCACGTGTCAGCGACTGTTTGCTCGTTGCTGTTTGCTCCCGCGACGACGAATCCGTGCCGACCTCGCTTCCCCGCCGGCCGCCATGAAATTGGAGCTTCCGAGAGGAGAAAATCTCGAGAAGTAGAGAGAGAAAACCACAGCGTGAGCGAGCGTGGGCGTCCTTGATTCCGGCGACATGAAGGCCCCCGCCGCGGCCGCGGCCGCGGTCGGCAACAGGGCTGGTGGGGTGGATCCGTCGATTCCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGATTCCTTCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGCGCATGCATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACCAAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAATTCCAGTAGTTTGTTACCAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGACTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTTATGAAGTCTGTCTTCAACATTTGGAGCAGGAATCCCACACTGTCCTCAGCGATGCTGGTTTTCAGAAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCCGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGATGCAATTTTGGCCAAAATAGAAGTTTCACAGGTTCATTTGGAATTGCTGAAGCAAACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGATTCACCCTATGGGTAGCTACCCAAGAGTCACAGATATCCACAAAAATACATATGAACTGTTTGGTCCCGTGAATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTAACCTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGCTGTGCAACTTGAAGTGGGTCCTCTACTGGTTTATCGGCAATACGAGTTTCGCACCACCATCTGGATCTTTGTGTGCAGCGCAATCATCTAAGAGATGATGATGTCACTGACCTATTAAGGTGGTGTTTGGATCCAGGGACTTAACTTTAGTCCCTATATTTAGACACTAATTTAGAGTATTAGATATAGACTACTTACAAAACTAATTACATAAATGAAAGCTAATTCGCGAGACAAATTTTTAAGCCTAATTAATCCATAATTAGAGAATGTTTACTGTAGCATCACATAGGCTAATTATGGATTAATTAGACTCAATAGATTCGTCTCGCGAATTAGTCTAAGATTATGAATGGGTTTTATTAATAGTCTACGTTTAATATTTGTAATTAGTGTCCAAACATCCAATGTGATAAGGACTTGAAAGTTTTAGTCCCATCTAAACATGGTCTAAACTGATTGTAGCCGCACATTGAACAGATAGTAGCATTGACGTGACATATTCAAAGATGAATAGTTTATACAACTAACTCTTCGCTTC
CDS Sequence
- >LOC_Os01g48920.1 CDS ATGAAGGCCCCCGCCGCGGCCGCGGCCGCGGTCGGCAACAGGGCTGGTGGGGTGGATCCGTCGATTCCGCGGTTCAAGTGCCAGGAGTGCCACCGCGCGCTCGTCGTCGTCGGCGTGGATTCCTTCGCCGATAAGCTCCCGGCTCAGGCCACCTCTGCGCATGCATCCTCTGTTCATGGAAGTATTATGGGAGCTAGCAGGATGGATAATTCTTATGTCGTGCTATCCAAGCAAAACAAATCTCATGGCCATGGAATTCCCCCACGCCCACCAAGTGCAGCAGCCCCACATATCGAACCTAACCAGCCAACAAGAGCGATGGAGGGTTCATATATAGTGCTTCCACCTGCTGCTGCTTCCATATACAAGACATCTACTTCTGAAGGAGGTGGTGCGCAGTTGCCACCACCAAGTATCAATTCCAGTAGTTTGTTACCAGGAAATAGTTTTCACTCTAACGTGACTGTATTAAAACGGGCATTTGAGATTGCTACGTCACAAACTCAGGTTGAGCAGCCAATGTGTCTGGACTGTATGAGGTTGCTCTCTGATAAGATGGATAAGGAGATTGAAGATGTTAATGCTGACATTAAAGCTTATGAAGTCTGTCTTCAACATTTGGAGCAGGAATCCCACACTGTCCTCAGCGATGCTGGTTTTCAGAAGGAGAAACTGAAGATTGAAGAAGAAGAAAAGAAGCTTAACGCCGCTATTGAAGAAGCTGAAAAGCAATATTCAGAAATTAGTTCTGAGATGAAGGATCTTGAAATAAAATCTAAAGAATTTGAAGAATTGGAAGAAAGGTATTGGCATGAATTCAATAGCTTTCAGTTTCAGTTGACATCTCACCAGGAAGAAAGAGATGCAATTTTGGCCAAAATAGAAGTTTCACAGGTTCATTTGGAATTGCTGAAGCAAACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGAGTAATTGGAACAATAAACAACTTCCGACTCGGACGCCTTCCTAATGTACAGGTTGAATGGGATGAGATAAATGCTGCTTGGGGTCAGGCTGCTCTTCTTTTGCATACCATGGCTCAGTACTTCACCCCAAAATTTGAGTACCGGATTAAGATTCACCCTATGGGTAGCTACCCAAGAGTCACAGATATCCACAAAAATACATATGAACTGTTTGGTCCCGTGAATTTATTCTGGAGCACACGTTTTGACAAAGCCATGACATGGTTTCTAACCTGCCTGCAAGATTTTGCTGAGTTCGCTATTAGCTTGGATAAAGAGAACAATGTACCACCTGAGAAGTCATTAAAGCTCCCATACAAGATTGATGGTGACAAGGTAGGGAGCCACACAATCTTCTTAAGTTTTAATAAAGTGGAGAACTGGACGAAAGCACTAAAATACACGCTGTGCAACTTGAAGTGGGTCCTCTACTGGTTTATCGGCAATACGAGTTTCGCACCACCATCTGGATCTTTGTGTGCAGCGCAATCATCTAAGAGATGA
Protein Sequence
- >LOC_Os01g48920.1 protein MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFADKLPAQATSAHASSVHGSIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQPTRAMEGSYIVLPPAAASIYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRAFEIATSQTQVEQPMCLDCMRLLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDAGFQKEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVHLELLKQTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFTPKFEYRIKIHPMGSYPRVTDIHKNTYELFGPVNLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKVENWTKALKYTLCNLKWVLYWFIGNTSFAPPSGSLCAAQSSKR*