Gene Details:
- MSU gene ID: LOC_Os01g51300
- RAPdb gene ID: Os01g0710000
- Gene Symbol: OsRBAP1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The MSI1 member OsRBAP1 gene, identified by a modified MutMap method, is required for rice height and spikelet fertility.
- Altogether, our results suggest that OsRBAP1 plays an important role in the regulation of rice height and spikelet fertility.
- The CRISPR/Cas9 system was used to switch off OsRBAP1 in PTWT to obtain the knockout mutant OsRBAP1, which exhibited a severe reduction in height and fertility.
- MutMap-based cloning revealed the occurrence of a single amino acid substitution in the LOC_Os01g51300 gene, belonging to the MSI1 (multicopy suppressor of IRA1) member OsRBAP1.
Function-related keywords:
Literature:
- The MSI1 member OsRBAP1 gene, identied by a modied MutMap method, is required for rice height and spikelet fertility . DOI: 10.1016/j.plantsci.2022.111201 ; PMID: 35643623
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os01g51300.1 cDNA ATTCGGGCACAAGAGGGGTGGCATCTCTGAGCGGGAGCCACGCGCAAGGGTCCAGAGCAAACGCTCCTCATACGACAGAGAGAGCGTGACAGCGCGAGGGGGTTCGGAGGCGGGAGCGGGCGACGGCGGCGGCGGCGGGCGCCAGCGAGCGGCGAAGGGCGCGCTGGAGATGAAGGAGAAGGGGTCGAGGGCGGCGGTGGACGAGCGCTACGCGCAGTGGAAGTCGCTCATCCCGGTGCTCTACGACTGGTTCGCCAACCACAACCTCGTCTGGCCGTCCCTCTCCTGCCGGTGGGGACCCCAGTTTGAGAAGGCTACCTACAAGAATCGTCAGCGTCTTTACCTTTCAGAGCAGACGGATGGGACTGTCCCTAATACTCTGGTTATTGCAAATTGTGAAGTTGTCAAACCAAGGGTTGCAGCTGCTGAACATATATCTCAGTTCAATGAGGAAGCACGATCACCTTTTGTAAAGAAGTACAAGACTATAATTCATCCAGGCGAGGTGAACAGGATTAGGGAGCTTCCGCAGAACAGTAAGATCATTGCCACTCATACCGACAGCCCAGATGTTCTCATTTGGGATGTCGAGGCCCAGCCAAATAGACAAGCTCAACTGGCACAGATGGAGTCTCGTCCTGATTTGGTACCACCTGACTCTCGCCCTGATTTGATATTAAGAGGACATAAGGATATTGCTGAGTTTGCGCTTGCTATGTGCCCAGCTGAGCCATATGTGTTATCTGGAGGAAAAGACAAATCTGTTGTATGGTGGAGCATCCAAGACCACATATCTGCACTGGGAGATTCCTCGAAAACTGAATCTTCTCCAGGGGCATCAGGAAGCAAGGGAAAAACTGCAAATGATAAGGATAGTCCTAAAGTTGATCCTCGTGGTATCTTTCTTGGCCACGACAGTACTGTTGAAGATGTCCAGTTCTGCCCTTCTAGTGCACAGGAGTTTTGTAGTGTAGGCGATGATTCTTGTCTTATTCTTTGGGATGCCCGGAGTGGTACAGGCCCAGCTGTTAAGGTTGAGAAAGCTCATGGTGGTGATGTTCATTGTGTTGACTGGAACCTCCATGATGTTAACTATATCTTAACTGGTTCTGCGGATAATTCTGTCCGTATGTGGGACCGGAGAAATCTGGGTTCTGGAGGAGCTGGCATTCCAGTTCACAAATTTGAGGGTCATAAAGCTGCTGTTCTTTGTGTTCAGTGGTCACCTGACAAGGCATCTGTATTTGGAAGCTCTGCGGAAGACGGCTTCTTAAATGTGTGGGATCATGAGAAGGTTGGAAATAAGAAAAATCCCAACGCACCTGCTGGGCTTTTCTTTCAACATGCTGGTCATAGGGATAAGATTGTAGACTTCCACTGGAATTCTTCGGATCCTTGGACTATTGTGAGTGTGTCTGATGATGGTGAGAGTACTGGTGGAGGTGGAACATTGCAGATATGGCGCATGAGTGACCTGATATACCGTCCAGAAGATGAAGTTCTTGCAGAGCTGGAGAACTTCAAGACTCACTTGGCCAGCTGTGCTCCAAGGAGCTGAATCGTGTGACTATCTGTGTAACCCAGTCCTGTAATAACTCTAGTAGGTTTCTAATTTCTTGTCCATTTAGAATGTTCCTTTCAAATATTGGTTATATCCTCTGGTGCGGAACCCAGGCTTGTACCCTTCAAGTGCTTGTGCGACTCTTTTACCTTACTGTATCGACTCAAATCGGTAAGCTAGTGCAAACACAGCAGAGCAGAATCTCTGTGGGCAGATTATTTGGATGCTAAACATTGTTCTGGAGTCTCGTATTGGACCTAGTTGTATTGTTAGCCTGACTTGGTGACTTAATCAGATGGTTCTTCAGATAGA
- >LOC_Os01g51300.2 cDNA ATTCGGGCACAAGAGGGGTGGCATCTCTGAGCGGGAGCCACGCGCAAGGGTCCAGAGCAAACGCTCCTCATACGACAGAGAGAGCGTGACAGCGCGAGGGGGTTCGGAGGCGGGAGCGGGCGACGGCGGCGGCGGCGGGCGCCAGCGAGCGGCGAAGGGCGCGCTGGAGATGAAGGAGAAGGGGTCGAGGGCGGCGGTGGACGAGCGCTACGCGCAGTGGAAGTCGCTCATCCCGGTGCTCTACGACTGGTTCGCCAACCACAACCTCGTCTGGCCGTCCCTCTCCTGCCGGTGGGGACCCCAGTTTGAGAAGGCTACCTACAAGAATCGTCAGCGTCTTTACCTTTCAGAGCAGACGGATGGGACTGTCCCTAATACTCTGGTTATTGCAAATTGTGAAGTTGTCAAACCAAGGGTTGCAGCTGCTGAACATATATCTCAGTTCAATGAGGAAGCACGATCACCTTTTGTAAAGAAGTACAAGACTATAATTCATCCAGGCGAGGTGAACAGGATTAGGGAGCTTCCGCAGAACAGTAAGATCATTGCCACTCATACCGACAGCCCAGATGTTCTCATTTGGGATGTCGAGGCCCAGCCAAATAGACAAGCTCAACTGGCACAGATGGAGTCTCGTCCTGATTTGGTACCACCTGACTCTCGCCCTGATTTGATATTAAGAGGACATAAGGATATTGCTGAGTTTGCGCTTGCTATGTGCCCAGCTGAGCCATATGTGTTATCTGGAGGAAAAGACAAATCTGTTGTATGGTGGAGCATCCAAGACCACATATCTGCACTGGGAGATTCCTCGAAAACTGAATCTTCTCCAGGGGCATCAGGAAGCAAGGGAAAAACTGCAAATGATAAGGATAGTCCTAAAGTTGATCCTCGTGGTATCTTTCTTGGCCACGACAGTACTGTTGAAGATGTCCAGTTCTGCCCTTCTAGTGCACAGGAGTTTTGTAGTGTAGGCGATGATTCTTGTCTTATTCTTTGGGATGCCCGGAGTGGTACAGGCCCAGCTGTTAAGGTTGAGAAAGCTCATGGTGGTGATGTTCATTGTGTTGACTGGAACCTCCATGATGTTAACTATATCTTAACTGGTTCTGCGGATAATTCTGTCCGTATGTGGGACCGGAGAAATCTGGGTTCTGGAGGAGCTGGCATTCCAGTTCACAAATTTGAGGGTCATAAAGCTGCTGTTCTTTGTGTTCAGTGGTCACCTGACAAGGCATCTGTATTTGGAAGCTCTGCGGAAGACGGCTTCTTAAATGTGTGGGATCATGAGAAGGTTGGAAATAAGAAAAATCCCAACGCACCTGCTGGGCTTTTCTTTCAACATGCTGGTCATAGGGATAAGATTGTAGACTTCCACTGGAATTCTTCGGATCCTTGGACTATTGTGAGTGTGTCTGATGATGGTGAGAGTACTGGTGGAGGTGGAACATTGCAGATATGGCGCATGAGTGACCTGATATACCGTCCAGAAGATGAAGTTCTTGCAGAGCTGGAGAACTTCAAGACTCACTTGGCCAGCTGTGCTCCAAGGAGCTGAATCGTGTGACTATCTGTGTAACCCAGTCCTGTAATAACTCTAGTAGGTTTCTAATTTCTTGTCCATTTAGAATGTTCCTTTCAAATATTGGTTATATCCTCTGGTGCGGAACCCAGGCTTGTACCCTTCAAGTGCTTGTGCGACTCTTTTACCTTACTGTATCGACTCAAATCGGTAAGCTAGTGCAAACACAGCAGAGCAGAATCTCTGTGGGCAGATTATTTGGATGCTAAACATTGTTCTGGAGTCTCGTATTGGACCTAGTTGTATTGTTAGCCTGACTTGGTGACTTAATCAGATGGTTCTTCAGATAGA
CDS Sequence
- >LOC_Os01g51300.1 CDS ATGAAGGAGAAGGGGTCGAGGGCGGCGGTGGACGAGCGCTACGCGCAGTGGAAGTCGCTCATCCCGGTGCTCTACGACTGGTTCGCCAACCACAACCTCGTCTGGCCGTCCCTCTCCTGCCGGTGGGGACCCCAGTTTGAGAAGGCTACCTACAAGAATCGTCAGCGTCTTTACCTTTCAGAGCAGACGGATGGGACTGTCCCTAATACTCTGGTTATTGCAAATTGTGAAGTTGTCAAACCAAGGGTTGCAGCTGCTGAACATATATCTCAGTTCAATGAGGAAGCACGATCACCTTTTGTAAAGAAGTACAAGACTATAATTCATCCAGGCGAGGTGAACAGGATTAGGGAGCTTCCGCAGAACAGTAAGATCATTGCCACTCATACCGACAGCCCAGATGTTCTCATTTGGGATGTCGAGGCCCAGCCAAATAGACAAGCTCAACTGGCACAGATGGAGTCTCGTCCTGATTTGGTACCACCTGACTCTCGCCCTGATTTGATATTAAGAGGACATAAGGATATTGCTGAGTTTGCGCTTGCTATGTGCCCAGCTGAGCCATATGTGTTATCTGGAGGAAAAGACAAATCTGTTGTATGGTGGAGCATCCAAGACCACATATCTGCACTGGGAGATTCCTCGAAAACTGAATCTTCTCCAGGGGCATCAGGAAGCAAGGGAAAAACTGCAAATGATAAGGATAGTCCTAAAGTTGATCCTCGTGGTATCTTTCTTGGCCACGACAGTACTGTTGAAGATGTCCAGTTCTGCCCTTCTAGTGCACAGGAGTTTTGTAGTGTAGGCGATGATTCTTGTCTTATTCTTTGGGATGCCCGGAGTGGTACAGGCCCAGCTGTTAAGGTTGAGAAAGCTCATGGTGGTGATGTTCATTGTGTTGACTGGAACCTCCATGATGTTAACTATATCTTAACTGGTTCTGCGGATAATTCTGTCCGTATGTGGGACCGGAGAAATCTGGGTTCTGGAGGAGCTGGCATTCCAGTTCACAAATTTGAGGGTCATAAAGCTGCTGTTCTTTGTGTTCAGTGGTCACCTGACAAGGCATCTGTATTTGGAAGCTCTGCGGAAGACGGCTTCTTAAATGTGTGGGATCATGAGAAGGTTGGAAATAAGAAAAATCCCAACGCACCTGCTGGGCTTTTCTTTCAACATGCTGGTCATAGGGATAAGATTGTAGACTTCCACTGGAATTCTTCGGATCCTTGGACTATTGTGAGTGTGTCTGATGATGGTGAGAGTACTGGTGGAGGTGGAACATTGCAGATATGGCGCATGAGTGACCTGATATACCGTCCAGAAGATGAAGTTCTTGCAGAGCTGGAGAACTTCAAGACTCACTTGGCCAGCTGTGCTCCAAGGAGCTGA
- >LOC_Os01g51300.2 CDS ATGAAGGAGAAGGGGTCGAGGGCGGCGGTGGACGAGCGCTACGCGCAGTGGAAGTCGCTCATCCCGGTGCTCTACGACTGGTTCGCCAACCACAACCTCGTCTGGCCGTCCCTCTCCTGCCGGTGGGGACCCCAGTTTGAGAAGGCTACCTACAAGAATCGTCAGCGTCTTTACCTTTCAGAGCAGACGGATGGGACTGTCCCTAATACTCTGGTTATTGCAAATTGTGAAGTTGTCAAACCAAGGGTTGCAGCTGCTGAACATATATCTCAGTTCAATGAGGAAGCACGATCACCTTTTGTAAAGAAGTACAAGACTATAATTCATCCAGGCGAGGTGAACAGGATTAGGGAGCTTCCGCAGAACAGTAAGATCATTGCCACTCATACCGACAGCCCAGATGTTCTCATTTGGGATGTCGAGGCCCAGCCAAATAGACAAGCTCAACTGGCACAGATGGAGTCTCGTCCTGATTTGGTACCACCTGACTCTCGCCCTGATTTGATATTAAGAGGACATAAGGATATTGCTGAGTTTGCGCTTGCTATGTGCCCAGCTGAGCCATATGTGTTATCTGGAGGAAAAGACAAATCTGTTGTATGGTGGAGCATCCAAGACCACATATCTGCACTGGGAGATTCCTCGAAAACTGAATCTTCTCCAGGGGCATCAGGAAGCAAGGGAAAAACTGCAAATGATAAGGATAGTCCTAAAGTTGATCCTCGTGGTATCTTTCTTGGCCACGACAGTACTGTTGAAGATGTCCAGTTCTGCCCTTCTAGTGCACAGGAGTTTTGTAGTGTAGGCGATGATTCTTGTCTTATTCTTTGGGATGCCCGGAGTGGTACAGGCCCAGCTGTTAAGGTTGAGAAAGCTCATGGTGGTGATGTTCATTGTGTTGACTGGAACCTCCATGATGTTAACTATATCTTAACTGGTTCTGCGGATAATTCTGTCCGTATGTGGGACCGGAGAAATCTGGGTTCTGGAGGAGCTGGCATTCCAGTTCACAAATTTGAGGGTCATAAAGCTGCTGTTCTTTGTGTTCAGTGGTCACCTGACAAGGCATCTGTATTTGGAAGCTCTGCGGAAGACGGCTTCTTAAATGTGTGGGATCATGAGAAGGTTGGAAATAAGAAAAATCCCAACGCACCTGCTGGGCTTTTCTTTCAACATGCTGGTCATAGGGATAAGATTGTAGACTTCCACTGGAATTCTTCGGATCCTTGGACTATTGTGAGTGTGTCTGATGATGGTGAGAGTACTGGTGGAGGTGGAACATTGCAGATATGGCGCATGAGTGACCTGATATACCGTCCAGAAGATGAAGTTCTTGCAGAGCTGGAGAACTTCAAGACTCACTTGGCCAGCTGTGCTCCAAGGAGCTGA
Protein Sequence
- >LOC_Os01g51300.1 protein MKEKGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYLSEQTDGTVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRQAQLAQMESRPDLVPPDSRPDLILRGHKDIAEFALAMCPAEPYVLSGGKDKSVVWWSIQDHISALGDSSKTESSPGASGSKGKTANDKDSPKVDPRGIFLGHDSTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGTGPAVKVEKAHGGDVHCVDWNLHDVNYILTGSADNSVRMWDRRNLGSGGAGIPVHKFEGHKAAVLCVQWSPDKASVFGSSAEDGFLNVWDHEKVGNKKNPNAPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQIWRMSDLIYRPEDEVLAELENFKTHLASCAPRS*
- >LOC_Os01g51300.2 protein MKEKGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYLSEQTDGTVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRQAQLAQMESRPDLVPPDSRPDLILRGHKDIAEFALAMCPAEPYVLSGGKDKSVVWWSIQDHISALGDSSKTESSPGASGSKGKTANDKDSPKVDPRGIFLGHDSTVEDVQFCPSSAQEFCSVGDDSCLILWDARSGTGPAVKVEKAHGGDVHCVDWNLHDVNYILTGSADNSVRMWDRRNLGSGGAGIPVHKFEGHKAAVLCVQWSPDKASVFGSSAEDGFLNVWDHEKVGNKKNPNAPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQIWRMSDLIYRPEDEVLAELENFKTHLASCAPRS*