Gene Details:
- MSU gene ID: LOC_Os01g53220
- RAPdb gene ID: Os01g0733200
- Gene Symbol: OsHsfC1b
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Impaired function of OsHsfC1b in the hsfc1b mutant and the amiRNA lines led to decreased salt and osmotic stress tolerance, increased sensitivity to ABA, and temporal misregulation of salt-responsive genes involved in signalling and ion homeostasis.
- METHODOLOGY: We analysed the expression of OsHsfC1b in the rice japonica cultivars Dongjin and Nipponbare exposed to salt stress as well as after mannitol, abscisic acid (ABA) and H(2)O(2) treatment.
- CONCLUSIONS: OsHsfC1b plays a role in ABA-mediated salt stress tolerance in rice.
- Here we characterized the function of the OsHsfC1b (Os01g53220) transcription factor from rice.
- Transient expression of OsHsfC1b fused to GFP in protoplasts revealed nuclear localization of the transcription factor.
- Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp. japonica.
- For functional characterization of OsHsfC1b, we analysed the physiological response of a T-DNA insertion line (hsfc1b) and two artificial micro-RNA (amiRNA) knock-down lines to salt, mannitol and ABA treatment.
- Furthermore, OsHsfC1b is involved in the response to osmotic stress and is required for plant growth under non-stress conditions.
- PRINCIPAL RESULTS: Expression of OsHsfC1b was induced by salt, mannitol and ABA, but not by H(2)O(2).
Function-related keywords:
- homeostasis , salt-stress , transcription-factor , ABA , growth , salt , salt-tolerance
Literature:
- Identification and expression analysis of OsHsfs in rice . DOI: 10.1631/jzus.B0820190 ; PMID: 19353748
- Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp. japonica . DOI: 10.1093/aobpla/pls011 ; PMID: 22616023
Related News:
Gene Resources:
- NCBI ID: AK066316
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os01g53220.1 cDNA GCGCGCTCACTCCCTCCCTTGCCCCCACCGACGAACGGAACAAATCTTAGCGAGGAAAAAGCGAGCGCTTTTTTCTTATCCTGTTCCGCGGGCGCGCTGCCACGACCGAACCGGGAGGATACTTGCGAATTACACGATCGGTTGTGGCACTATGATGGGCGGCGAGTGCAAGGTCCACCAGCTCCAGGCCGCCGGCGACGGGGGCCCAGGCGCCGTCGCGCCGTTCGTGGCGAAGACGTTCCACATGGTGAGCGACCCGTCGACGAACGCCGTCGTGCGCTGGGGAGGCGCCGGCAACACGTTCCTCGTGCTCGACCCCGCCGCCTTCTCCGACTTCCTCCTCCCCTCCTACTTCAAGCACCGCAACTTCGCCAGCTTCGTCCGGCAGCTCAACACCTACGGATTCCGCAAGGTGGATCCGGACAGGTGGGAGTTCGCGCACGAGTCGTTCCTGCGGGGGCAGGCGCAGCTGCTGCCGCGGATCGTGCGCAAGAAGAAGAAGGGCGGGGCGGCGCCGGGGTGCAGGGAGCTGTGCGAGGAAGGGGAGGAGGTGCGGGGCACCATCGAGGCGGTGCAGCGGCTGCGGGAGGAGCAGAGGGGCATGGAGGAGGAGCTCCAGGCCATGGACCAGAGGCTGCGCGCCGCCGAGAGCCGCCCGGGCCAGATGATGGCGTTCCTCGCCAAGCTCGCCGACGAACCGGGCGTCGTGCTGCGCGCCATGCTCGCCAAGAAGGAGGAGCTGGCCGCGGCCGGCAACAACGGGTCCGATCCCTGCAAGAGGCGGCGGATCGGGGCCGACACGGGGCGCGGCGGCGTGGCGACCGGCGGCGACGCGGCCGAGATGGCGCAGAGCAGAGGCACCGTGCCGTTCCCGTTCTCTGTTCTTGGCCAAGTGTTCTACTAGCCGCAACAGGGCCAGATAGGTGTACACGTACGCAGTCCCCCGTTGTATATATAACAACAGTGTAACTTCGCCTCGGTTTAGTTGCCTACTGTTAAGTTAGTGTACTTAAGCATAATAGGAGAGTTTGGCTAAGTAGCTATCGTTGGATTTGTGTGTATATATCGACTATCGAGGGGCTAATAACGCCTATTTTGTTCAATGTATCGTGCTTACGACTTCTGAGAGAGAGATGTTAGGCTTATGCTC
CDS Sequence
- >LOC_Os01g53220.1 CDS ATGATGGGCGGCGAGTGCAAGGTCCACCAGCTCCAGGCCGCCGGCGACGGGGGCCCAGGCGCCGTCGCGCCGTTCGTGGCGAAGACGTTCCACATGGTGAGCGACCCGTCGACGAACGCCGTCGTGCGCTGGGGAGGCGCCGGCAACACGTTCCTCGTGCTCGACCCCGCCGCCTTCTCCGACTTCCTCCTCCCCTCCTACTTCAAGCACCGCAACTTCGCCAGCTTCGTCCGGCAGCTCAACACCTACGGATTCCGCAAGGTGGATCCGGACAGGTGGGAGTTCGCGCACGAGTCGTTCCTGCGGGGGCAGGCGCAGCTGCTGCCGCGGATCGTGCGCAAGAAGAAGAAGGGCGGGGCGGCGCCGGGGTGCAGGGAGCTGTGCGAGGAAGGGGAGGAGGTGCGGGGCACCATCGAGGCGGTGCAGCGGCTGCGGGAGGAGCAGAGGGGCATGGAGGAGGAGCTCCAGGCCATGGACCAGAGGCTGCGCGCCGCCGAGAGCCGCCCGGGCCAGATGATGGCGTTCCTCGCCAAGCTCGCCGACGAACCGGGCGTCGTGCTGCGCGCCATGCTCGCCAAGAAGGAGGAGCTGGCCGCGGCCGGCAACAACGGGTCCGATCCCTGCAAGAGGCGGCGGATCGGGGCCGACACGGGGCGCGGCGGCGTGGCGACCGGCGGCGACGCGGCCGAGATGGCGCAGAGCAGAGGCACCGTGCCGTTCCCGTTCTCTGTTCTTGGCCAAGTGTTCTACTAG
Protein Sequence
- >LOC_Os01g53220.1 protein MMGGECKVHQLQAAGDGGPGAVAPFVAKTFHMVSDPSTNAVVRWGGAGNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKKKKGGAAPGCRELCEEGEEVRGTIEAVQRLREEQRGMEEELQAMDQRLRAAESRPGQMMAFLAKLADEPGVVLRAMLAKKEELAAAGNNGSDPCKRRRIGADTGRGGVATGGDAAEMAQSRGTVPFPFSVLGQVFY*