Gene Details:
- MSU gene ID: LOC_Os01g59150
- RAPdb gene ID: Os01g0805900
- Gene Symbol: Ostub16
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- A long leader intron of the Ostub16 rice beta-tubulin gene is required for high-level gene expression and can autonomously promote transcription both in vivo and in vitro . DOI: 10.1046/j.0960-7412.2001.01192.x ; PMID: 12060225
Related News:
Gene Resources:
- NCBI ID: X78143
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os01g59150.1 cDNA CTCCCCGGCCTCTCCACCCACCCCTCGATCTCTCGCTCGCTCGCCGCCGATCGGATCGCGTGGTTGGATCATCACAACTCTGCAAAGATGAGAGAGATCCTGCACATCCAAGGCGGGCAATGTGGCAACCAGATCGGTGCCAAATTCTGGGAGGTGGTGTGTGATGAGCATGGCATTGACCCTACCGGGCGGTACACAGGCAACTCAGATCTGCAGTTGGAGCGTGTCAATGTGTACTACAATGAGGCCTCCTGCGGTCGCTTTGTGCCTCGTGCTGTTCTCATGGACCTTGAGCCTGGTACTATGGACAGTGTCCGCACTGGACCCTATGGCCAGATCTTCCGCCCTGACAACTTTGTGTTCGGGCAATCTGGTGCTGGTAACAACTGGGCCAAGGGACACTACACTGAGGGTGCCGAGCTAATTGATTCTGTTTTAGATGTTGTGAGGAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGATTCCAAGTATGCCACTCTCTTGGTGGTGGTACTGGATCTGGTATGGGTACACTTTTGATATCAAAGATCAGGGAGGAGTACCCTGACCGCATGATGCTGACATTCTCAGTTTTCCCCTCACCAAAAGTATCTGATACTGTGGTTGAGCCATACAATGCTACACTCTCAGTCCATCAGTTGGTTGAGAATGCTGATGAGTGTATGGTTCTTGATAATGAGGCTCTCTACGACATTTGCTTCAGGACTCTCAAGCTGACCACACCTAGCTTTGGGGATTTGAACCATTTGATTTCTGCCACCATGAGTGGAGTCACATGCTGCCTAAGGTTCCCTGGTCAGTTGAACTCTGACCTCCGTAAGCTGGCAGTGAACCTTATCCCCTTTCCCCGTCTCCACTTCTTCATGGTCGGATTCGCCCCGCTGACATCACGTGGCTCCCAGCAGTACCGTGCCCTTACTGTTCCTGAGCTCACACAGCAGATGTGGGATGCCAAGAACATGATGTGCGCTGCTGATCCTCGCCATGGCCGTTACCTCACCGCCTCTGCCATGTTCCGTGGAAAGATGAGCACCAAGGAGGTTGATGAGCAGATGATCAATGTCCAGAACAAGAACTCATCCTACTTCGTCGAGTGGATCCCCAACAATGTGAAGTCCAGTGTCTGTGACATTCCACCGAGAGGCCTCTCCATGGCATCGACCTTCATTGGCAACTCAACATCCATCCAGGAGATGTTCCGGAGGGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGCGAAGGCATGGACGAGATGGAGTTCACCGAGGCAGAGAGCAACATGAACGACCTTGTCTCTGAGTACCAGCAGTACCAGGATGCCACCGCCGATGAGGAGGGCGAGTACGAGGACGAGGAGCAGCAGGAGGCTGACGACATGTAAGGTGGCTTTTGCTTGGTGGTTCTAGGGCAGGGTTTTGTGTGCTTGGTGTTTCCGTCTTACATTATCACCGTATTACCGCCTCGTACGCCACCGCCCGCTTCCTATGTCTTCGCTTTGTTTTTTCGTCTGTGCTATGGGAACCTTTTTGGGTACTGTATTACTTGATGCTGGTCTGCGATTGTTGATATTTCGGATGAATTTTACCTTTCCGCGTTGGTCCTCGTGTGCAATATTTGCAAATTACAAGGAACTAGGAAGGTAGCCCGCGCATTCGCGTGGGCATGTATCGTAGGCTGTATTTGAGATAATCGTAAGTAATAGGCCGATTGTGTTAAAATGTTGTATTTGTTATATAGTAAACTATAGGCATATAGATCTTATATCGTTGGTTTGATTATAAACATTGCAATAGTTAGATTAGAAATCAGACATGAAACTTATAATT
- >LOC_Os01g59150.2 cDNA CTCCCCGGCCTCTCCACCCACCCCTCGATCTCTCGCTCGCTCGCCGCCGATCGGATCGCGTGGTTGGATCATCACAACTCTGCAAAGATGAGAGAGATCCTGCACATCCAAGGCGGGCAATGTGGCAACCAGATCGGTGCCAAATTCTGGGAGGTGGTGTGTGATGAGCATGGCATTGACCCTACCGGGCGGTACACAGGCAACTCAGATCTGCAGTTGGAGCGTGTCAATGTGTACTACAATGAGGCCTCCTGCGGTCGCTTTGTGCCTCGTGCTGTTCTCATGGACCTTGAGCCTGGTACTATGGACAGTGTCCGCACTGGACCCTATGGCCAGATCTTCCGCCCTGACAACTTTGTGTTCGGGCAATCTGGTGCTGGTAACAACTGGGCCAAGGGACACTACACTGAGGGTGCCGAGCTAATTGATTCTGTTTTAGATGTTGTGAGGAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGATTCCAAGTATGCCACTCTCTTGGTGGTGGTACTGGATCTGGTATGGGTACACTTTTGATATCAAAGATCAGGGAGGAGTACCCTGACCGCATGATGCTGACATTCTCAGTTTTCCCCTCACCAAAAGTATCTGATACTGTGGTTGAGCCATACAATGCTACACTCTCAGTCCATCAGTTGGTTGAGAATGCTGATGAGTGTATGGTTCTTGATAATGAGGCTCTCTACGACATTTGCTTCAGGACTCTCAAGCTGACCACACCTAGCTTTGGGGATTTGAACCATTTGATTTCTGCCACCATGAGTGGAGTCACATGCTGCCTAAGGTTCCCTGGTCAGTTGAACTCTGACCTCCGTAAGCTGGCAGTGAACCTTATCCCCTTTCCCCGTCTCCACTTCTTCATGGTCGGATTCGCCCCGCTGACATCACGTGGCTCCCAGCAGTACCGTGCCCTTACTGTTCCTGAGCTCACACAGCAGATGTGGGATGCCAAGAACATGATGTGCGCTGCTGATCCTCGCCATGGCCGTTACCTCACCGCCTCTGCCATGTTCCGTGGAAAGATGAGCACCAAGGAGGTTGATGAGCAGATGATCAATGTCCAGAACAAGAACTCATCCTACTTCGTCGAGTGGATCCCCAACAATGTGAAGTCCAGTGTCTGTGACATTCCACCGAGAGGCCTCTCCATGGCATCGACCTTCATTGGCAACTCAACATCCATCCAGGAGATGTTCCGGAGGGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGCGAAGGCATGGACGAGATGGAGTTCACCGAGGCAGAGAGCAACATGAACGACCTTGTCTCTGAGTACCAGCAGTACCAGGATGCCACCGCCGATGAGGAGGGCGAGTACGAGGACGAGGAGCAGCAGGAGGCTGACGACATGTAAGGTGGCTTTTGCTTGGTGGTTCTAGGGCAGGGTTTTGTGTGCTTGGTGTTTCCGTCTTACATTATCACCGTATTACCGCCTCGTACGCCACCGCCCGCTTCCTATGTCTTCGCTTTGTTTTTTCGTCTGTGCTATGGGAACCTTTTTGGGTACTGTATTACTTGATGCTGGTCTGCGATTGTTGATATTTCGGATGAATTTTACCTTTCCGCGTTGGTCCTCGTGTGCAATATTTGCAAATTACAAGGAACTAGGAAGGTAGCCCGCGCATTCGCGTGGGCATGTATCGTAGGCTGTATTTGAGATAATCGTAAGTAATAGGCCGATTGTGTTAAAATGTTGTATTTGTTATATAGTAAACTATAGGCATATAGATCTTATATCGTTGGTTTGATTATAAACATTGCAATAGTTAGATTAGAAATCAGACATGAAACTTATAATT
CDS Sequence
- >LOC_Os01g59150.1 CDS ATGAGAGAGATCCTGCACATCCAAGGCGGGCAATGTGGCAACCAGATCGGTGCCAAATTCTGGGAGGTGGTGTGTGATGAGCATGGCATTGACCCTACCGGGCGGTACACAGGCAACTCAGATCTGCAGTTGGAGCGTGTCAATGTGTACTACAATGAGGCCTCCTGCGGTCGCTTTGTGCCTCGTGCTGTTCTCATGGACCTTGAGCCTGGTACTATGGACAGTGTCCGCACTGGACCCTATGGCCAGATCTTCCGCCCTGACAACTTTGTGTTCGGGCAATCTGGTGCTGGTAACAACTGGGCCAAGGGACACTACACTGAGGGTGCCGAGCTAATTGATTCTGTTTTAGATGTTGTGAGGAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGATTCCAAGTATGCCACTCTCTTGGTGGTGGTACTGGATCTGGTATGGGTACACTTTTGATATCAAAGATCAGGGAGGAGTACCCTGACCGCATGATGCTGACATTCTCAGTTTTCCCCTCACCAAAAGTATCTGATACTGTGGTTGAGCCATACAATGCTACACTCTCAGTCCATCAGTTGGTTGAGAATGCTGATGAGTGTATGGTTCTTGATAATGAGGCTCTCTACGACATTTGCTTCAGGACTCTCAAGCTGACCACACCTAGCTTTGGGGATTTGAACCATTTGATTTCTGCCACCATGAGTGGAGTCACATGCTGCCTAAGGTTCCCTGGTCAGTTGAACTCTGACCTCCGTAAGCTGGCAGTGAACCTTATCCCCTTTCCCCGTCTCCACTTCTTCATGGTCGGATTCGCCCCGCTGACATCACGTGGCTCCCAGCAGTACCGTGCCCTTACTGTTCCTGAGCTCACACAGCAGATGTGGGATGCCAAGAACATGATGTGCGCTGCTGATCCTCGCCATGGCCGTTACCTCACCGCCTCTGCCATGTTCCGTGGAAAGATGAGCACCAAGGAGGTTGATGAGCAGATGATCAATGTCCAGAACAAGAACTCATCCTACTTCGTCGAGTGGATCCCCAACAATGTGAAGTCCAGTGTCTGTGACATTCCACCGAGAGGCCTCTCCATGGCATCGACCTTCATTGGCAACTCAACATCCATCCAGGAGATGTTCCGGAGGGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGCGAAGGCATGGACGAGATGGAGTTCACCGAGGCAGAGAGCAACATGAACGACCTTGTCTCTGAGTACCAGCAGTACCAGGATGCCACCGCCGATGAGGAGGGCGAGTACGAGGACGAGGAGCAGCAGGAGGCTGACGACATGTAA
- >LOC_Os01g59150.2 CDS ATGAGAGAGATCCTGCACATCCAAGGCGGGCAATGTGGCAACCAGATCGGTGCCAAATTCTGGGAGGTGGTGTGTGATGAGCATGGCATTGACCCTACCGGGCGGTACACAGGCAACTCAGATCTGCAGTTGGAGCGTGTCAATGTGTACTACAATGAGGCCTCCTGCGGTCGCTTTGTGCCTCGTGCTGTTCTCATGGACCTTGAGCCTGGTACTATGGACAGTGTCCGCACTGGACCCTATGGCCAGATCTTCCGCCCTGACAACTTTGTGTTCGGGCAATCTGGTGCTGGTAACAACTGGGCCAAGGGACACTACACTGAGGGTGCCGAGCTAATTGATTCTGTTTTAGATGTTGTGAGGAAGGAGGCTGAGAACTGTGACTGCCTGCAAGGATTCCAAGTATGCCACTCTCTTGGTGGTGGTACTGGATCTGGTATGGGTACACTTTTGATATCAAAGATCAGGGAGGAGTACCCTGACCGCATGATGCTGACATTCTCAGTTTTCCCCTCACCAAAAGTATCTGATACTGTGGTTGAGCCATACAATGCTACACTCTCAGTCCATCAGTTGGTTGAGAATGCTGATGAGTGTATGGTTCTTGATAATGAGGCTCTCTACGACATTTGCTTCAGGACTCTCAAGCTGACCACACCTAGCTTTGGGGATTTGAACCATTTGATTTCTGCCACCATGAGTGGAGTCACATGCTGCCTAAGGTTCCCTGGTCAGTTGAACTCTGACCTCCGTAAGCTGGCAGTGAACCTTATCCCCTTTCCCCGTCTCCACTTCTTCATGGTCGGATTCGCCCCGCTGACATCACGTGGCTCCCAGCAGTACCGTGCCCTTACTGTTCCTGAGCTCACACAGCAGATGTGGGATGCCAAGAACATGATGTGCGCTGCTGATCCTCGCCATGGCCGTTACCTCACCGCCTCTGCCATGTTCCGTGGAAAGATGAGCACCAAGGAGGTTGATGAGCAGATGATCAATGTCCAGAACAAGAACTCATCCTACTTCGTCGAGTGGATCCCCAACAATGTGAAGTCCAGTGTCTGTGACATTCCACCGAGAGGCCTCTCCATGGCATCGACCTTCATTGGCAACTCAACATCCATCCAGGAGATGTTCCGGAGGGTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGCGAAGGCATGGACGAGATGGAGTTCACCGAGGCAGAGAGCAACATGAACGACCTTGTCTCTGAGTACCAGCAGTACCAGGATGCCACCGCCGATGAGGAGGGCGAGTACGAGGACGAGGAGCAGCAGGAGGCTGACGACATGTAA
Protein Sequence
- >LOC_Os01g59150.1 protein MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEQQEADDM*
- >LOC_Os01g59150.2 protein MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEQQEADDM*