Gene Details:

Functional Descriptions:

  • OsUBC11 overexpression lines showed the same root phenotypes.
  • These results demonstrated that OsUBC11 was involved in root development.
  • Expression of the auxin synthesis regulating gene OsYUCCA4/6/7/9, the auxin transport gene OsAUX1, auxin/indole-3-acetic acid (Aux/IAA) family gene OsIAA31, auxin response factor OsARF16 and root regulator key genes, including OsWOX11, OsCRL1, OsCRL5 was significantly down-regulated in OsUBC11 overexpressing plants.
  • Collectively, these results indicate that OsUBC11 modulates auxin signaling, ultimately affecting root development at the rice seedling stage.
  • Ubiquitin-Conjugating Enzyme OsUBC11 Affects the Development of Roots via Auxin Pathway.
  • In the present study, a T-DNA insertional mutant named R164, which exhibited a significant decrease in the length of primary and lateral roots, was used as the experimental material to explore the potential function of OsUBC11.
  • Biochemical experiments showed that OsUBC11 is a lysine-48-linked ubiquitin chain-forming conjugase.
  • Application of exogenous NAA restored the length of lateral and primary roots in R164 and OsUBC11 overexpression lines.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g62244.3 cDNA CTTATTTCAGATATAGAGCCCTTTTCATGTGCTTGCTGATTTGTCATCTATTCATCTTTGGTGTTTGGGCTGTTAGCTTGATGATCTAAACTGTTCTTTCTCAAACTGCCTTGTGACAATGACATTTATTTTCAGTGATGGAGGTTACTTTAATGCAATAATGAGCTTTCCACAGAATTATCCTAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATACGGTTGAGAGCATAGTTCTGAGCATCATTTCGATGCTTTCTGGTCCAAATGATGAATCACCAGCAAATATTGAAGCAGCTAAGGAATGGAGAGAGAAGAGGGATGACTTCAAGAAAAAGGTTAGGCGCCTTGTAAGGAAATCACAAGAAATGCTCTGAAGAAACCGGCAGTACTGGGGAAAGTTAACCATACCACGTCACATGTGCATGATTTGGCTGTCGATTTCCAAATGTCAGTTGACACTAGCAATTCACTTCTCCCCCTCTGTACTTCCCATAGTGTGCCTGGTGGTGGTCGCGGTTTCGTCTCCCAGGAAGGCTGAATAGCACTGGGACATGTTTGTCACCTATTCTAAAGCTCTGGTTGTATTTGTGTGGCTTGGGCTGTAAACGTTGAGAAACTTTGAAATACTGCCACTCATCACAATTTTCGTAACAAACGTCATATAAGCAGGCACCTGCCTGATCTGCTAGCTGTTGAACGTTGAAACACAATGTCTGCAAACTGGTTTCAGTCCGTTCTTTGTAATATGTTCTTATAAATGGAGCAATACTCGGTGCTGTACAAAAATACTTGCTGGAGTTTACTCATTCATCAGTTATAAATCTATATTGGCTTA
  • >LOC_Os01g62244.1 cDNA CTTATTTCAGATATAGAGCCCTTTTCATGTGCTTGCTGATTTGTCATCTATTCATCTTTGGTGTTTGGGCTGTTAGCTTGATGATCTAAACTGTTCTTTCTCAAACTGCCTTGTGACAATGACATTTATTTTCAGTGATGGAGGTTACTTTAATGCAATAATGAGCTTTCCACAGAATTATCCTAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATACGGTTGAGAGCATAGTTCTGAGCATCATTTCGATGCTTTCTGGTCCAAATGATGAATCACCAGCAAATATTGAAGCAGCTAAGGAATGGAGAGAGAAGAGGGATGACTTCAAGAAAAAGGTTAGGCGCCTTGTAAGGAAATCACAAGAAATGCTCTGAAGAAACCGGCAGTACTGGGGAAAGTTAACCATACCACGTCACATGTGCATGATTTGGCTGTCGATTTCCAAATGTCAGTTGACACTAGCAATTCACTTCTCCCCCTCTGTACTTCCCATAGTGTGCCTGGTGGTGGTCGCGGTTTCGTCTCCCAGGAAGGCTGAATAGCACTGGGACATGTTTGTCACCTATTCTAAAGCTCTGGTTGTATTTGTGTGGCTTGGGCTGTAAACGTTGAGAAACTTTGAAATACTGCCACTCATCACAATTTTCGTAACAAACGTCATATAAGCAGGCACCTGCCTGATCTGCTAGCTGTTGAACGTTGAAACACAATGTCTGCAAACTGGTTTCAGTCCGTTCTTTGTAATATGTTCTTATAAATGGAGCAATACTCGGTGCTGTACAAAAATACTTGCTGGAGTTTACTCATTCATCAGTTATAAATCTATATTGGCTTA
  • >LOC_Os01g62244.2 cDNA CTTATTTCAGATATAGAGCCCTTTTCATGTGCTTGCTGATTTGTCATCTATTCATCTTTGGTGTTTGGGCTGTTAGCTTGATGATCTAAACTGTTCTTTCTCAAACTGCCTTGTGACAATGACATTTATTTTCAGTGATGGAGGTTACTTTAATGCAATAATGAGCTTTCCACAGAATTATCCTAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATACGGTTGAGAGCATAGTTCTGAGCATCATTTCGATGCTTTCTGGTCCAAATGATGAATCACCAGCAAATATTGAAGCAGCTAAGGAATGGAGAGAGAAGAGGGATGACTTCAAGAAAAAGGTTAGGCGCCTTGTAAGGAAATCACAAGAAATGCTCTGAAGAAACCGGCAGTACTGGGGAAAGTTAACCATACCACGTCACATGTGCATGATTTGGCTGTCGATTTCCAAATGTCAGTTGACACTAGCAATTCACTTCTCCCCCTCTGTACTTCCCATAGTGTGCCTGGTGGTGGTCGCGGTTTCGTCTCCCAGGAAGGCTGAATAGCACTGGGACATGTTTGTCACCTATTCTAAAGCTCTGGTTGTATTTGTGTGGCTTGGGCTGTAAACGTTGAGAAACTTTGAAATACTGCCACTCATCACAATTTTCGTAACAAACGTCATATAAGCAGGCACCTGCCTGATCTGCTAGCTGTTGAACGTTGAAACACAATGTCTGCAAACTGGTTTCAGTCCGTTCTTTGTAATATGTTCTTATAAATGGAGCAATACTCGGTGCTGTACAAAAATACTTGCTGGAGTTTACTCATTCATCAGTTATAAATCTATATTGGCTTA
CDS Sequence
  • >LOC_Os01g62244.3 CDS ATGACATTTATTTTCAGTGATGGAGGTTACTTTAATGCAATAATGAGCTTTCCACAGAATTATCCTAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATACGGTTGAGAGCATAGTTCTGAGCATCATTTCGATGCTTTCTGGTCCAAATGATGAATCACCAGCAAATATTGAAGCAGCTAAGGAATGGAGAGAGAAGAGGGATGACTTCAAGAAAAAGGTTAGGCGCCTTGTAAGGAAATCACAAGAAATGCTCTGA
  • >LOC_Os01g62244.1 CDS ATGACATTTATTTTCAGTGATGGAGGTTACTTTAATGCAATAATGAGCTTTCCACAGAATTATCCTAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATACGGTTGAGAGCATAGTTCTGAGCATCATTTCGATGCTTTCTGGTCCAAATGATGAATCACCAGCAAATATTGAAGCAGCTAAGGAATGGAGAGAGAAGAGGGATGACTTCAAGAAAAAGGTTAGGCGCCTTGTAAGGAAATCACAAGAAATGCTCTGA
  • >LOC_Os01g62244.2 CDS ATGACATTTATTTTCAGTGATGGAGGTTACTTTAATGCAATAATGAGCTTTCCACAGAATTATCCTAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATACGGTTGAGAGCATAGTTCTGAGCATCATTTCGATGCTTTCTGGTCCAAATGATGAATCACCAGCAAATATTGAAGCAGCTAAGGAATGGAGAGAGAAGAGGGATGACTTCAAGAAAAAGGTTAGGCGCCTTGTAAGGAAATCACAAGAAATGCTCTGA
Protein Sequence
  • >LOC_Os01g62244.3 protein MTFIFSDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML*
  • >LOC_Os01g62244.1 protein MTFIFSDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML*
  • >LOC_Os01g62244.2 protein MTFIFSDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML*