Gene Details:

Functional Descriptions:

  • Down-regulation of a LBD-like gene, OsIG1, leads to occurrence of unusual double ovules and developmental abnormalities of various floral organs and megagametophyte in rice.
  • Taken together, these results demonstrate that OsIG1 plays an essential role in the regulation of empty-glume identity, floral organ number control and female gametophyte development in rice.
  • Our data suggest, OsMADS1 commits and maintains determinate floret development by regulating floral meristem termination, carpel and ovule differentiation genes (OsMADS58, OsMADS13) while its modulation of genes such as OsMADS15, OsIG1 and OsMADS32 could be relevant in the differentiation and development of palea.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os01g66590.1 cDNA AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
  • >LOC_Os01g66590.3 cDNA AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
  • >LOC_Os01g66590.2 cDNA AGATATCAAATTCCTCCCCTTCTCATTTCCTCCCCCCATCTTCGCAACATACAGTACTCACCATCTTTTGGTGGCTCTCTCACTCTCCTCTCTCTCTCCCTAGAACAGAAACCCAAACAAAACGGGGCGAGGTAGTAGCTAGGGGGAAAAAGGGAGAAGTTTTCGGTTTAAAAGGAGAGAACGGCCCGGCCGGAAGTGGTGGAAGGCGAGGAGGAGGAGAACACGGTGAGATCAGGAGAGAGGAGATACCGGCCGGCGGAGGCGGCGGCGCGGCGGCGCAGGGATAGCGGGAAAAAAGATCGCGCCTAAAAAGGGCGAGGAGGATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAGTTGGGAGCGCTTGATTCGGCGGTTGTTGTGTTCGTCTCTGCATGTCAGGTTACTGACTAGGAAATTAAAATTCCCTAAGTTCTGGAAATTGAAGCGGTGAAAAGGATCGTAAATTAAGGCTCATGCTTAGGAGGATTGCTCGGTCTATTTTACATGAAGATCATGCGTGTTCACTCTGTTAATTTGCCTTGTCAATGCTTATCTTTTTCTTTCAATCGATCATCCGCAATGTCGAACATTTTATTTGTGCCTTGATCTGTTGCTGGGATTGTTGCTGTACTGTGTGCATGCTTGTCCCTGATTTTAGCACTTGGACGGCTACCTTAATTAATACTACTATATTGATACTGCTCCTATATAGAGGCTAGCTAGAGTCGATGCTGCAGTTGACCTTCAGATTAATGTTGAATCTGTTTGACAAA
CDS Sequence
  • >LOC_Os01g66590.1 CDS ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
  • >LOC_Os01g66590.3 CDS ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
  • >LOC_Os01g66590.2 CDS ATGGCGTCATCGTCAGCGTCGTCCGTGCCGGCGCCGTCGGGGTCGGTGATCACCATAGCGTCGGCGTCGGCGTCGGCGGCGGCGAACACGGCGGCGTGCGGCACGGGGTCGCCGTGCGCGGCGTGCAAGTTCCTCCGCCGCAAGTGCCAGCCCGACTGCGTGTTCGCGCCCTACTTCCCGCCGGACAACCCGCAGAAGTTCGTCCACGTGCACCGCGTCTTCGGCGCGAGCAACGTGACCAAGCTGCTGAACGAGCTGCACCCCTACCAGCGCGAGGACGCCGTGAACTCGCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCATCATCTCCATCCTCCAGCGCAACCTCCGCCAGCTCCAGCAGGACCTCGCCCGCGCCAAGTTCGAGCTCTCCAAGTACCAGCAGGCGGCGGCTGCGGCGGCGGCGGCTTCCGCGTCGACGGGGACGAATAACGGGCCGCACTCGATGGCGGAGTTCATCGGCAACGCGGTGCCGAACGGCGCGCAGAGCTTCATCAACGTCGGGCACTCGGCGGCGCTCGCCTCCGTCGGTGGCGCGGCGGCGTGCTTCGGGCAAGAGCAGCAGTTCTCGGCCGTCCACATGCTGTCGAGGAGCTACGAAGGGGAGCCCATCGCGAGGCTCGGCGGCAACGGCGGCTACGAGTTCGGGTACTCGACGTCGATGGCCGGCGGCGGGCATATGTCCGGGCTCGGCGCGCTCGGCGGCGCGCCGTTCTTGAAGTCCGGCATCGCCGGCAGCGACGAGAGGCAAGGCGCCGGCCAGTAG
Protein Sequence
  • >LOC_Os01g66590.1 protein MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*
  • >LOC_Os01g66590.3 protein MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*
  • >LOC_Os01g66590.2 protein MASSSASSVPAPSGSVITIASASASAAANTAACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTGTNNGPHSMAEFIGNAVPNGAQSFINVGHSAALASVGGAAACFGQEQQFSAVHMLSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLGALGGAPFLKSGIAGSDERQGAGQ*