Gene Details:
- MSU gene ID: LOC_Os01g72090
- RAPdb gene ID: Os01g0949400
- Gene Symbol: Se13 OsHY2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Complete loss of photoperiodic response in the rice mutant line X61 is caused by deficiency of phytochrome chromophore biosynthesis gene . DOI: 10.1007/s00122-010-1426-2 ; PMID: 20700573
Related News:
Gene Resources:
- NCBI ID: AK101395
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os01g72090.2 cDNA ACTTGCCACTGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGGCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCTGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGGTACATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAAGAGATTGGTGAATCTGAGTCATGTATTATTGTTCTCCGGTTGCACTGATTGTCGTTGTTAGACGATGGTCTCTGCTCCTGGTAGTAGACATGATCTGAAACAAGAGGGGTCATCCTGCCCTGCCCGGATTAGGATCCTC
- >LOC_Os01g72090.1 cDNA ACTTGCCACTGAAGAGTGGCTGCTTGCAGGCTTGGCTTGCAGCTGGGGAGAGAGCATGAGCAGCGGCGGCGTCGGCGGCGGGAGCTTGGGCGCCGGCTTGCTGTACCACAAGTTCGTCAGCTTCGCGCTGGAGGAGACCCGACTCCGGACCACCCTCACCCCTCACCCCTCCCAGGAAAAGTTCAAGTCTATAAAACCCAATGATGATAATACAGTTTTCAATGCTCTCTCATTCAGTGCACCGAAAATTAGATTGCTTCGCAGCTTGACAATCGAGAAGAAAAACTCATATCAGGTTCTTGACTTTGCCGCTTTCTCTGAACCTGAATACGATCTTCCTATATTTTGCGCCAACGTTTTTACAACTCATGCACAAAGTATTGTTGTATTGGACCTCAATCCTCTATATGATACTACAGTGCACAAGGATTACAAAGATAAGTACTATAGGAGTATAATGCCTCTTGTACACAAGTATAACGAGGTACATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAAAATGTTCGCTACGCCTTTCGGCCTGATCAATCTCTCTTATGCTTGTAGTACTGTTTTCTTTTTTTTTAGAAAACTTACATTTTTCATGCTCATATCCCTGAACTTGGATTGAATAAGAAGAGATTGGTGAATCTGAGTCATGTATTATTGTTCTCCGGTTGCACTGATTGTCGTTGTTAGACGATGGTCTCTGCTCCTGGTAGTAGACATGATCTGAAACAAGAGGGGTCATCCTGCCCTGCCCGGATTAGGATCCTC
CDS Sequence
- >LOC_Os01g72090.2 CDS ATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAA
- >LOC_Os01g72090.1 CDS ATGGATCTTTCCTGGCTCCACCCAACCTATTGCCTCATAAATTGTTATTTAGCTCGATATCTTTATTTAGAGGATATGCAGCTTCTTCCTTGGGGTGGCAAGATTACGAGTGAGTCATTGAAGTTCTTCTCTCCAATTGTGATCTGGACAATATTTGAGTCAACTGAACACAACCACCATGTTCTACATTCAGCTTTCGTGGATTATTATAAGGTCTGGCTTGAATTAATGGACCAAGCAATTAAAGAAAATAACAAAGCAACAATTGCTCGTAACCAAGAAGAACAACATAAATATCTCACATGGAGGGCTGAGAAGGATCCTGGCTATCCCCTTTTGAAGAAGTTAATTGGTGAAAGTCGTGCCGAGGATCTGGTGATGGAGTTTCTGTTTGAAGGAGTAAATACTCTTGGAACAAAATCATTTCTGGATTATTTCCCTGAATACGCCCGTGATGATGGGTCAGTGAACAAGAAAAGGAGTATGATCGGCAAGTCTTTTGAAACTAGGCCTTGGGACGCCAATGGAGAATTCATTGGCGATGCCGAAGCACAGTAA
Protein Sequence
- >LOC_Os01g72090.2 protein MDLSWLHPTYCLINCYLARYLYLEDMQLLPWGGKITSESLKFFSPIVIWTIFESTEHNHHVLHSAFVDYYKVWLELMDQAIKENNKATIARNQEEQHKYLTWRAEKDPGYPLLKKLIGESRAEDLVMEFLFEGVNTLGTKSFLDYFPEYARDDGSVNKKRSMIGKSFETRPWDANGEFIGDAEAQ*
- >LOC_Os01g72090.1 protein MDLSWLHPTYCLINCYLARYLYLEDMQLLPWGGKITSESLKFFSPIVIWTIFESTEHNHHVLHSAFVDYYKVWLELMDQAIKENNKATIARNQEEQHKYLTWRAEKDPGYPLLKKLIGESRAEDLVMEFLFEGVNTLGTKSFLDYFPEYARDDGSVNKKRSMIGKSFETRPWDANGEFIGDAEAQ*