Gene Details:
- MSU gene ID: LOC_Os02g16040
- RAPdb gene ID: Os02g0261100
- Gene Symbol: OsUBC5b
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- These results strongly suggest that EL5 and OsUBC5b have roles in plant defense response through the turnover of protein(s) via the ubiquitin/proteasome system.
Function-related keywords:
Literature:
- Active site residues and amino acid specificity of the ubiquitin carrier protein-binding RING-H2 finger domain . DOI: 10.1074/jbc.M411127200 ; PMID: 16186120
- EL5, a rice N-acetylchitooligosaccharide elicitor-responsive RING-H2 finger protein, is a ubiquitin ligase which functions in vitro in co-operation with an elicitor-responsive ubiquitin-conjugating enzyme, OsUBC5b . DOI: 10.1046/j.1365-313x.2002.01299.x ; PMID: 12028574
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g16040.1 cDNA ACACGGTCCAGTCCTCCTCCTCGCGTAGACGCGGCGGCCGAGGAACAAGTCCGTCACGCGAACCTTCCAGAACCTCACACGTCACGCAACCTCCTCCTCTTTATTACGACTACTACCACCCCCTCTCTCCTCTCCGTTCCACCGCCGGATTCAGATTCGGAGAGAGCTACTCCTCGTCGTTAGCCATGGCGTCCAAGCGGATCCTCAAGGAGCTCAAGGACCTGCAGAAGGATCCCCCCACCTCCTGCAGCGCCGGCCCTGTGGCAGAAGATATGTTCCACTGGCAGGCAACACTGATGGGTCCATCAGATAGCCCTTATGCTGGAGGCGTGTTTTTGGTTACCATTCATTTTCCTCCTGATTATCCATTCAAACCGCCTAAGGTGGCATTGAAGACAAAGGTGTTCCACCCAAACATTAATAGCAACGGAAGCATATGCCTTGATATCTTGAAGGAGCAGTGGAGTCCTGCATTGACTATTTCAAAGGTGCTACTCTCAATTTGCTCGCTGTTGACGGATCCAAATCCTGATGATCCATTGGTTCCAGAGATTGCTCACATGTACAAGACTGATCGGGCCAAGTACGAGTCCACCGCAAGGAGCTGGACCCAGAAATATGCTATGGGCTAGAATGGTTAACAATAAGAAATGTGAGATATGCCATTGTATTGCCTTGTATTCTCCTGTAACTCTTTCAACATTTAAGAAACAGCAAGAATCAAATTGAACTCTCGAGTTGTTGTATGGAATCCTACTATAGATGTTCAGCTATTGTAAATTATGTAGTGGGTGGTTCTATTGATTGTTCGATGAGCACTTGGAATGGTACTTTTATGTTCCAGAGTAACTGTGACAAAATAGTCTGTATTGATCTCCTGAAAGGCTGAAACCCATCTTGGACTGTTTAGTGTTTTATTAATTTCATTCTAGAATTAGAAATTAATAATTAGCACTATTTACTGTTTTATTAGTTTCATTCTAAAATTCGAAATTAATAATTAGCAAGTTTGTAAC
- >LOC_Os02g16040.2 cDNA ACACGGTCCAGTCCTCCTCCTCGCGTAGACGCGGCGGCCGAGGAACAAGTCCGTCACGCGAACCTTCCAGAACCTCACACGTCACGCAACCTCCTCCTCTTTATTACGACTACTACCACCCCCTCTCTCCTCTCCGTTCCACCGCCGGATTCAGATTCGGAGAGAGCTACTCCTCGTCGTTAGCCATGGCGTCCAAGCGGATCCTCAAGGAGCTCAAGGACCTGCAGAAGGATCCCCCCACCTCCTGCAGCGCCGGCCCTGTGGCAGAAGATATGTTCCACTGGCAGGCAACACTGATGGGTCCATCAGATAGCCCTTATGCTGGAGGCGTGTTTTTGGTTACCATTCATTTTCCTCCTGATTATCCATTCAAACCGCCTAAGGTGGCATTGAAGACAAAGGTGTTCCACCCAAACATTAATAGCAACGGAAGCATATGCCTTGATATCTTGAAGGAGCAGTGGAGTCCTGCATTGACTATTTCAAAGGTGCTACTCTCAATTTGCTCGCTGTTGACGGATCCAAATCCTGATGATCCATTGGTTCCAGAGATTGCTCACATGTACAAGACTGATCGGGCCAAGTACGAGTCCACCGCAAGGAGCTGGACCCAGAAATATGCTATGGGCTAGAATGGTTAACAATAAGAAATGTGAGATATGCCATTGTATTGCCTTGTATTCTCCTGTAACTCTTTCAACATTTAAGAAACAGCAAGAATCAAATTGAACTCTCGAGTTGTTGTATGGAATCCTACTATAGATGTTCAGCTATTGTAAATTATGTAGTGGGTGGTTCTATTGATTGTTCGATGAGCACTTGGAATGGTACTTTTATGTTCCAGAGTAACTGTGACAAAATAGTCTGTATTGATCTCCTGAAAGGCTGAAACCCATCTTGGACTGTTTAGTGTTTTATTAATTTCATTCTAGAATTAGAAATTAATAATTAGCACTATTTACTGTTTTATTAGTTTCATTCTAAAATTCGAAATTAATAATTAGCAAGTTTGTAAC
CDS Sequence
- >LOC_Os02g16040.1 CDS ATGGCGTCCAAGCGGATCCTCAAGGAGCTCAAGGACCTGCAGAAGGATCCCCCCACCTCCTGCAGCGCCGGCCCTGTGGCAGAAGATATGTTCCACTGGCAGGCAACACTGATGGGTCCATCAGATAGCCCTTATGCTGGAGGCGTGTTTTTGGTTACCATTCATTTTCCTCCTGATTATCCATTCAAACCGCCTAAGGTGGCATTGAAGACAAAGGTGTTCCACCCAAACATTAATAGCAACGGAAGCATATGCCTTGATATCTTGAAGGAGCAGTGGAGTCCTGCATTGACTATTTCAAAGGTGCTACTCTCAATTTGCTCGCTGTTGACGGATCCAAATCCTGATGATCCATTGGTTCCAGAGATTGCTCACATGTACAAGACTGATCGGGCCAAGTACGAGTCCACCGCAAGGAGCTGGACCCAGAAATATGCTATGGGCTAG
- >LOC_Os02g16040.2 CDS ATGGCGTCCAAGCGGATCCTCAAGGAGCTCAAGGACCTGCAGAAGGATCCCCCCACCTCCTGCAGCGCCGGCCCTGTGGCAGAAGATATGTTCCACTGGCAGGCAACACTGATGGGTCCATCAGATAGCCCTTATGCTGGAGGCGTGTTTTTGGTTACCATTCATTTTCCTCCTGATTATCCATTCAAACCGCCTAAGGTGGCATTGAAGACAAAGGTGTTCCACCCAAACATTAATAGCAACGGAAGCATATGCCTTGATATCTTGAAGGAGCAGTGGAGTCCTGCATTGACTATTTCAAAGGTGCTACTCTCAATTTGCTCGCTGTTGACGGATCCAAATCCTGATGATCCATTGGTTCCAGAGATTGCTCACATGTACAAGACTGATCGGGCCAAGTACGAGTCCACCGCAAGGAGCTGGACCCAGAAATATGCTATGGGCTAG
Protein Sequence
- >LOC_Os02g16040.1 protein MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*
- >LOC_Os02g16040.2 protein MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*