Gene Details:
- MSU gene ID: LOC_Os02g40510
- RAPdb gene ID: Os02g0618200
- Gene Symbol: OsPRR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Flowering genes downstream of OsPRR1 such as OsGI and Hd1 were down regulated in the A654 mutant.
- In addition, OsPIL13 and OsPIL15 colocalize with OsPRR1, an ortholog of the Arabidopsis APRR1 gene that controls photoperiodic flowering response through clock function.
- Together, these results suggest that overexpression of OsLF might repress expression of OsGI and Hd1 by competing with OsPRR1 in interacting with OsPIL13 and OsPIL15 and thus induce late flowering.
Function-related keywords:
Literature:
- An atypical HLH protein OsLF in rice regulates flowering time and interacts with OsPIL13 and OsPIL15 . DOI: 10.1016/j.nbt.2011.04.006 ; PMID: 21549224
- Characterization of a set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa . DOI: 10.1271/bbb.60643 ; PMID: 17485859
- OsELF3-1, an ortholog of Arabidopsis early flowering 3, regulates rice circadian rhythm and photoperiodic flowering . DOI: 10.1371/journal.pone.0043705 ; PMID: 22912900
- The role of casein kinase II in flowering time regulation has diversified during evolution . DOI: 10.1104/pp.109.148908 ; PMID: 20007447
- Nitrogen Mediates Flowering Time and Nitrogen Use Efficiency via Floral Regulators in Rice . DOI: 10.1016/j.cub.2020.10.095 ; PMID: 33278354
- Clock component OsPRR73 positively regulates rice salt tolerance by modulating OsHKT2;1-mediated sodium homeostasis . DOI: 10.15252/embj.2020105086 ; PMID: 33347628
Related News:
Gene Resources:
- NCBI ID: AB189038
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g40510.1 cDNA ACCCACGGGGCCGCGGCTCGCGGCTCGTCCCGTCCCGTCCCGTGACGAATCCATTGACACCGGCACACGCACACGCACACCCGCACCGCGCGACGCGAGTACGCGACACAAACCGCTCGCGACGAGCCGTTTCGTTTATTTTTACACCGCCCCGGCGCGGCGTGACGAGGCCTTTTCTTCTTTCTTTCATCTCTCGCCGAGCCGAGCCGAGCCGAGCCGCGTGCCCCACCGAGAGAGGAAAGCAAAAGGTAGGGGGAGGAAAATATCCTGTGCCAGTAGAGCGGACACCAACGCCGCCACCACCACCGCCGCCGCCTCCTGAATAGATTAGGCGCGGATAATGGTGCGGGCCGGACCGCAACGCGCGGCGGAGGAGGACGCCGCCGGCGTCGGCGGCGGGTGGCGGCGGTAGCACACTGCTTAGCCTCTGGGGGCGATACTACTGGCGACGGCACGGGATATGGAGGAGGAGGCGCCGCCCGCAGATCCAACAACCGCTTCGTCCTCCTGCGTCGTCTAGTCTAGGCGCCGGCAGCTGCTGCTGGCTGCTGTGCTGTTCGTGCTGATTCGGACGCGTCGGCAGCTGGTGACAAGTGGCTAGGGGGGGAATCCGTGCGGGTCGGGGTATGGTGGGCGCCGGCGAGGGGGATCGCGTTGGCGGCGGGGCGGCGGTAGGGGGAGGGCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTGCTCTGCGACAGCGACCCAAGTAGCTCACGGGAGGTGCTCCGCCTCCTCTGCAACTGCTCATACCAAGTGACTTGCGCCAAGTCTCCGAGGCAGGTGATCAACGTACTCAACTGCGAGGCGGGGGAGATCGACATCATCTTGGCCGAGGTCGATCTGCCCGTCTCCAAGTGCTTCAAGATGCTCAAATACATCGCCAGGAACAAGGAATTGCGCCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTCTCTGTTGTTGTCAAGTGCTTGCGTCTCGGGGCAGCCGAGTACCTGGTCAAGCCACTGCGCATGAACGAGCTGCTGAACCTCTGGACCCATGTGTGGCGGCGAAGGCGGATGCTTGGTTTGTCGGAGAAAAACTTCTTCAATGACAATTTCGAGTTGGCGTTATCGGAACCTAGTGACGCCAATACCAACAGCACCACTCTTCTCTCGGATGACACAGATGATAAGCCAAAAGAAAACATTAATCAAGAAACAAGCACCTCGAATCAACATGAATATGAGTCTAATCCTTCTGATGCTGAGCCTAAACAAAAAGGCACACCAGAGGGTTTACTAGTCTCTACTGAAGGCGGCGACCAAGCTTCATCTCCCGGAGTAATGTTTTCACGTCCAATAAAGACTAACTTGAGGGTTGCTGAGTCTTCTGCTTTTCTAGCTTATGTTAAGTCAAGCACCCCAACTACCAGCTCATTTGACAGCGAACTACAAAAAGGTGGAAATCGGTTAGACTCTTCGGATCACAGGGGTAATTTCTCTAGTACAACTGACAGAAGTGACACTGGCACTGATGTAAATATTCGGGATAAAGAAGCCTTTGAGATGCCAGTGCAATACCCTGTGGTATGCTTTTCTTCCTCTAACTTGCATCTGGAGCGAAGCAATGAAGGCCAAAATGATGCTTCAGGAACTCCTCCTGTATATCATTTTCCCTTTTATTACCCAGGGATGATGGACCACGGTATGACACATCCTCCGGTGCAAAATTTCCAAGGGAACATAAACAACGCTCAAGTGCATACACCACAAACGTTGCTCCCTCAGTATAATGTTTATCCCCAATGTCATGGTGTATCTATGATGCCACCATTTCAGTATAATCCTGCTGGTATGAGCATTCAATCAAATCAACTGCCAACACAAAATATGTGGCCACAGGCATCAAGCACACCAATGCCCGAGGAAACATGTAGTCGGTCTGAACGGAGAGCTGCAGCACTTGCCAAATTCAGGCTGAAAAGGAAGGAACGTTGTTTTGACAAGAAGGTGAGGTACGTGAATAGGAAGAAACTTGCTGAAACAAGGCCGAGGGTGCGAGGGCAATTTGTTAGACAGGCAAACTATACAGATATAACCAGCACTGGAGATGATATCTCAGAAGATGAAGATGATGATCCATCCTCCAGGGAGGTAGAGATGGTTTCTTCTCCAGAGTAGTTTGAAAGGTTTTCCTATATGTAAAATAGAGTGCAGATGATTACTGCTCACTTTGCAACTCATTAGATGTAGGCAATACATTTCTTCTGCTTTTAACTAGGCAATACATCCACTCGCTCACACACAATACATCCTTTTTGTCCCCCAAGGAACTTGTGGCATATCCATCACTGTTACTATGGACGTTTTGGAGAAAATCATCTTTGAAGGTGAGATGTAATTATGCTAGTTAGTGATGCATAGGCCAGTCTAGATCGTAACCATCTTGTTTCAGAATCTTATAGGACTTTACTCAGTGCTCCTTCTTAGACACGTTTTTACTTCCATTTTCTCGATGTTGGAGGCTGTCCATGTTTGAACATCGTGTTCTACCACAGAAGTCGATTTTGGAGGTTGTACATGTTTGAACTTTGTGTTCTATCACAGAAGTTTGCGAGCACC
CDS Sequence
- >LOC_Os02g40510.1 CDS ATGGTGGGCGCCGGCGAGGGGGATCGCGTTGGCGGCGGGGCGGCGGTAGGGGGAGGGCAGCAGTTCGTGGACCGGAGCAAGGTGAGGATTCTGCTCTGCGACAGCGACCCAAGTAGCTCACGGGAGGTGCTCCGCCTCCTCTGCAACTGCTCATACCAAGTGACTTGCGCCAAGTCTCCGAGGCAGGTGATCAACGTACTCAACTGCGAGGCGGGGGAGATCGACATCATCTTGGCCGAGGTCGATCTGCCCGTCTCCAAGTGCTTCAAGATGCTCAAATACATCGCCAGGAACAAGGAATTGCGCCACATCCCCATCATAATGATGTCCAACAGAGACGAGGTCTCTGTTGTTGTCAAGTGCTTGCGTCTCGGGGCAGCCGAGTACCTGGTCAAGCCACTGCGCATGAACGAGCTGCTGAACCTCTGGACCCATGTGTGGCGGCGAAGGCGGATGCTTGGTTTGTCGGAGAAAAACTTCTTCAATGACAATTTCGAGTTGGCGTTATCGGAACCTAGTGACGCCAATACCAACAGCACCACTCTTCTCTCGGATGACACAGATGATAAGCCAAAAGAAAACATTAATCAAGAAACAAGCACCTCGAATCAACATGAATATGAGTCTAATCCTTCTGATGCTGAGCCTAAACAAAAAGGCACACCAGAGGGTTTACTAGTCTCTACTGAAGGCGGCGACCAAGCTTCATCTCCCGGAGTAATGTTTTCACGTCCAATAAAGACTAACTTGAGGGTTGCTGAGTCTTCTGCTTTTCTAGCTTATGTTAAGTCAAGCACCCCAACTACCAGCTCATTTGACAGCGAACTACAAAAAGGTGGAAATCGGTTAGACTCTTCGGATCACAGGGGTAATTTCTCTAGTACAACTGACAGAAGTGACACTGGCACTGATGTAAATATTCGGGATAAAGAAGCCTTTGAGATGCCAGTGCAATACCCTGTGGTATGCTTTTCTTCCTCTAACTTGCATCTGGAGCGAAGCAATGAAGGCCAAAATGATGCTTCAGGAACTCCTCCTGTATATCATTTTCCCTTTTATTACCCAGGGATGATGGACCACGGTATGACACATCCTCCGGTGCAAAATTTCCAAGGGAACATAAACAACGCTCAAGTGCATACACCACAAACGTTGCTCCCTCAGTATAATGTTTATCCCCAATGTCATGGTGTATCTATGATGCCACCATTTCAGTATAATCCTGCTGGTATGAGCATTCAATCAAATCAACTGCCAACACAAAATATGTGGCCACAGGCATCAAGCACACCAATGCCCGAGGAAACATGTAGTCGGTCTGAACGGAGAGCTGCAGCACTTGCCAAATTCAGGCTGAAAAGGAAGGAACGTTGTTTTGACAAGAAGGTGAGGTACGTGAATAGGAAGAAACTTGCTGAAACAAGGCCGAGGGTGCGAGGGCAATTTGTTAGACAGGCAAACTATACAGATATAACCAGCACTGGAGATGATATCTCAGAAGATGAAGATGATGATCCATCCTCCAGGGAGGTAGAGATGGTTTCTTCTCCAGAGTAG
Protein Sequence
- >LOC_Os02g40510.1 protein MVGAGEGDRVGGGAAVGGGQQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLSEKNFFNDNFELALSEPSDANTNSTTLLSDDTDDKPKENINQETSTSNQHEYESNPSDAEPKQKGTPEGLLVSTEGGDQASSPGVMFSRPIKTNLRVAESSAFLAYVKSSTPTTSSFDSELQKGGNRLDSSDHRGNFSSTTDRSDTGTDVNIRDKEAFEMPVQYPVVCFSSSNLHLERSNEGQNDASGTPPVYHFPFYYPGMMDHGMTHPPVQNFQGNINNAQVHTPQTLLPQYNVYPQCHGVSMMPPFQYNPAGMSIQSNQLPTQNMWPQASSTPMPEETCSRSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQANYTDITSTGDDISEDEDDDPSSREVEMVSSPE*