Gene Details:
- MSU gene ID: LOC_Os02g42290
- RAPdb gene ID: Os02g0634500
- Gene Symbol: OsCLP3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra . DOI: 10.1007/s00122-011-1634-4 ; PMID: 21713536
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g42290.2 cDNA TTCTCTCCTCGCCTCGCCCTATCCGTTCCTCGTTATAACTCACCTTCCTCCCCATCTCATATCCCCAAATTTCACTTCGCTCGAAATCCCCGAATCCAATCCGAACCGGCAGCGGCAGCCATGACGCCCTCCGCCCTCGCCCACCTAGCCTCCGCCTCGCCGCTCCCCGCCTTCTCCCCCAAGCCCAGGGCGAGGCCCGGCTCGGCGGCGGGGCCCGCGCTGCGGCGGCTGGCGGTGGCGGCGCCGGCGCCGCGGGCGTACTTCTCGTCGTCGCCCATGCCGTACCAGCCGCAGCCGCAGCAGCCGGCGGGGTACTCGTCGCACCAGGCGTTCGGCCTGGTGCCGATGGTCATCGAGACCACCTCGCGCGGGGAGAGGGCGTACGACATCTTCTCGCGCCTGCTCAAGGAGCGGATCGTGCTCATCCACGGGCCAATCGCCGACGAGACCGCCTCGCTCGTCGTCGCGCAGCTGCTCTTCCTCGAGTCGGAGAACCCGCTCAAGCCGGTCCACCTCTACATCAACTCCCCGGGCGGGGTCGTCACCGCGGGGCTCGCGATCTACGACACCATGCAGTACATCCGCTGCCCCGTCACCACGCTCTGCATCGGCCAGGCCACCGACATCGCCATCCAGGCCAAGGAGATTCTCAAGCTGCGCGACCGCCTCAACAAGATCTACCAGAAGCACACCGGCCAGGAGATCGACAAGATCGAGCAGTGCATGGAGCGCGACCTCTTCATGGACCCCGAGGAGGCGCGCGATTGGGGGCTCATCGACGAGGTAATTGAGAACCGCCCCGCGTCCCTGATACCCGAGGGCGCCACTGGCGTTGACCTGCCGCACCACAGCGCCGCTGGCGTCGGCGGAAGGGGCAGAGATGTCGAGGAGCCCTCCGCGGTGTGAGCTGTGGCCGCAAAGGTTGCCACTTGTTATTCAGGTTGCCGATGTGTTCGGCTCCTTACATGTTGTCTTGATTGCCTGAATTGAGCTACTGCTGATATTTATTGCAAATCTAAGGAAATTTTATTCCTTCCATACTGATAACTTCAGCATCATCGTATGAATCGGGAAAGCAGAGGTTCCACGATCACTTGTTCATCCCAACCTGGATGGGTGGATCATTGAATTATACCTGCACATACTTGGTTTAGTCCAAATGCAGGTAATCGATTTGTATATGAACACAATTGGATGAGACGGAGATTCTGTAAGGTCCTTCAAATTGAGGATTCACCAATTCACCATATCCACCTATTCTGATGTAAATGGATACCTTCTTACCGGTATATTCCATAGTGACATGTTTGAAATTCCATTCTTGTGTATTTATCTGATGCCATTTTGGTTAGGCCTTTCGCCCTGGTAAAATGACTTTTTTTTA
- >LOC_Os02g42290.3 cDNA TTCTCTCCTCGCCTCGCCCTATCCGTTCCTCGTTATAACTCACCTTCCTCCCCATCTCATATCCCCAAATTTCACTTCGCTCGAAATCCCCGAATCCAATCCGAACCGGCAGCGGCAGCCATGACGCCCTCCGCCCTCGCCCACCTAGCCTCCGCCTCGCCGCTCCCCGCCTTCTCCCCCAAGCCCAGGGCGAGGCCCGGCTCGGCGGCGGGGCCCGCGCTGCGGCGGCTGGCGGTGGCGGCGCCGGCGCCGCGGGCGTACTTCTCGTCGTCGCCCATGCCGTACCAGCCGCAGCCGCAGCAGCCGGCGGGGTACTCGTCGCACCAGGCGTTCGGCCTGGTGCCGATGGTCATCGAGACCACCTCGCGCGGGGAGAGGGCGTACGACATCTTCTCGCGCCTGCTCAAGGAGCGGATCGTGCTCATCCACGGGCCAATCGCCGACGAGACCGCCTCGCTCGTCGTCGCGCAGCTGCTCTTCCTCGAGTCGGAGAACCCGCTCAAGCCGGTCCACCTCTACATCAACTCCCCGGGCGGGGTCGTCACCGCGGGGCTCGCGATCTACGACACCATGCAGTACATCCGCTGCCCCGTCACCACGCTCTGCATCGGCCAGGCCACCGACATCGCCATCCAGGCCAAGGAGATTCTCAAGCTGCGCGACCGCCTCAACAAGATCTACCAGAAGCACACCGGCCAGGAGATCGACAAGATCGAGCAGTGCATGGAGCGCGACCTCTTCATGGACCCCGAGGAGGCGCGCGATTGGGGGCTCATCGACGAGGTAATTGAGAACCGCCCCGCGTCCCTGATACCCGAGGGCGCCACTGGCGTTGACCTGCCGCACCACAGCGCCGCTGGCGTCGGCGGAAGGGGCAGAGATGTCGAGGAGCCCTCCGCGGTGTGAGCTGTGGCCGCAAAGGTTGCCACTTGTTATTCAGGTTGCCGATGTGTTCGGCTCCTTACATGTTGTCTTGATTGCCTGAATTGAGCTACTGCTGATATTTATTGCAAATCTAAGGAAATTTTATTCCTTCCATACTGATAACTTCAGCATCATCGTATGAATCGGGAAAGCAGAGGTTCCACGATCACTTGTTCATCCCAACCTGGATGGGTGGATCATTGAATTATACCTGCACATACTTGGTTTAGTCCAAATGCAGGTAATCGATTTGTATATGAACACAATTGGATGAGACGGAGATTCTGTAAGGTCCTTCAAATTGAGGATTCACCAATTCACCATATCCACCTATTCTGATGTAAATGGATACCTTCTTACCGGTATATTCCATAGTGACATGTTTGAAATTCCATTCTTGTGTATTTATCTGATGCCATTTTGGTTAGGCCTTTCGCCCTGGTAAAATGACTTTTTTTTA
- >LOC_Os02g42290.1 cDNA TTCTCTCCTCGCCTCGCCCTATCCGTTCCTCGTTATAACTCACCTTCCTCCCCATCTCATATCCCCAAATTTCACTTCGCTCGAAATCCCCGAATCCAATCCGAACCGGCAGCGGCAGCCATGACGCCCTCCGCCCTCGCCCACCTAGCCTCCGCCTCGCCGCTCCCCGCCTTCTCCCCCAAGCCCAGGGCGAGGCCCGGCTCGGCGGCGGGGCCCGCGCTGCGGCGGCTGGCGGTGGCGGCGCCGGCGCCGCGGGCGTACTTCTCGTCGTCGCCCATGCCGTACCAGCCGCAGCCGCAGCAGCCGGCGGGGTACTCGTCGCACCAGGCGTTCGGCCTGGTGCCGATGGTCATCGAGACCACCTCGCGCGGGGAGAGGGCGTACGACATCTTCTCGCGCCTGCTCAAGGAGCGGATCGTGCTCATCCACGGGCCAATCGCCGACGAGACCGCCTCGCTCGTCGTCGCGCAGCTGCTCTTCCTCGAGTCGGAGAACCCGCTCAAGCCGGTCCACCTCTACATCAACTCCCCGGGCGGGGTCGTCACCGCGGGGCTCGCGATCTACGACACCATGCAGTACATCCGCTGCCCCGTCACCACGCTCTGCATCGGCCAGGCCACCGACATCGCCATCCAGGCCAAGGAGATTCTCAAGCTGCGCGACCGCCTCAACAAGATCTACCAGAAGCACACCGGCCAGGAGATCGACAAGATCGAGCAGTGCATGGAGCGCGACCTCTTCATGGACCCCGAGGAGGCGCGCGATTGGGGGCTCATCGACGAGGTAATTGAGAACCGCCCCGCGTCCCTGATACCCGAGGGCGCCACTGGCGTTGACCTGCCGCACCACAGCGCCGCTGGCGTCGGCGGAAGGGGCAGAGATGTCGAGGAGCCCTCCGCGGTGTGAGCTGTGGCCGCAAAGGTTGCCACTTGTTATTCAGGTTGCCGATGTGTTCGGCTCCTTACATGTTGTCTTGATTGCCTGAATTGAGCTACTGCTGATATTTATTGCAAATCTAAGGAAATTTTATTCCTTCCATACTGATAACTTCAGCATCATCGTATGAATCGGGAAAGCAGAGGTTCCACGATCACTTGTTCATCCCAACCTGGATGGGTGGATCATTGAATTATACCTGCACATACTTGGTTTAGTCCAAATGCAGGTAATCGATTTGTATATGAACACAATTGGATGAGACGGAGATTCTGTAAGGTCCTTCAAATTGAGGATTCACCAATTCACCATATCCACCTATTCTGATGTAAATGGATACCTTCTTACCGGTATATTCCATAGTGACATGTTTGAAATTCCATTCTTGTGTATTTATCTGATGCCATTTTGGTTAGGCCTTTCGCCCTGGTAAAATGACTTTTTTTTA
CDS Sequence
- >LOC_Os02g42290.2 CDS ATGACGCCCTCCGCCCTCGCCCACCTAGCCTCCGCCTCGCCGCTCCCCGCCTTCTCCCCCAAGCCCAGGGCGAGGCCCGGCTCGGCGGCGGGGCCCGCGCTGCGGCGGCTGGCGGTGGCGGCGCCGGCGCCGCGGGCGTACTTCTCGTCGTCGCCCATGCCGTACCAGCCGCAGCCGCAGCAGCCGGCGGGGTACTCGTCGCACCAGGCGTTCGGCCTGGTGCCGATGGTCATCGAGACCACCTCGCGCGGGGAGAGGGCGTACGACATCTTCTCGCGCCTGCTCAAGGAGCGGATCGTGCTCATCCACGGGCCAATCGCCGACGAGACCGCCTCGCTCGTCGTCGCGCAGCTGCTCTTCCTCGAGTCGGAGAACCCGCTCAAGCCGGTCCACCTCTACATCAACTCCCCGGGCGGGGTCGTCACCGCGGGGCTCGCGATCTACGACACCATGCAGTACATCCGCTGCCCCGTCACCACGCTCTGCATCGGCCAGGCCACCGACATCGCCATCCAGGCCAAGGAGATTCTCAAGCTGCGCGACCGCCTCAACAAGATCTACCAGAAGCACACCGGCCAGGAGATCGACAAGATCGAGCAGTGCATGGAGCGCGACCTCTTCATGGACCCCGAGGAGGCGCGCGATTGGGGGCTCATCGACGAGGTAATTGAGAACCGCCCCGCGTCCCTGATACCCGAGGGCGCCACTGGCGTTGACCTGCCGCACCACAGCGCCGCTGGCGTCGGCGGAAGGGGCAGAGATGTCGAGGAGCCCTCCGCGGTGTGA
- >LOC_Os02g42290.3 CDS ATGACGCCCTCCGCCCTCGCCCACCTAGCCTCCGCCTCGCCGCTCCCCGCCTTCTCCCCCAAGCCCAGGGCGAGGCCCGGCTCGGCGGCGGGGCCCGCGCTGCGGCGGCTGGCGGTGGCGGCGCCGGCGCCGCGGGCGTACTTCTCGTCGTCGCCCATGCCGTACCAGCCGCAGCCGCAGCAGCCGGCGGGGTACTCGTCGCACCAGGCGTTCGGCCTGGTGCCGATGGTCATCGAGACCACCTCGCGCGGGGAGAGGGCGTACGACATCTTCTCGCGCCTGCTCAAGGAGCGGATCGTGCTCATCCACGGGCCAATCGCCGACGAGACCGCCTCGCTCGTCGTCGCGCAGCTGCTCTTCCTCGAGTCGGAGAACCCGCTCAAGCCGGTCCACCTCTACATCAACTCCCCGGGCGGGGTCGTCACCGCGGGGCTCGCGATCTACGACACCATGCAGTACATCCGCTGCCCCGTCACCACGCTCTGCATCGGCCAGGCCACCGACATCGCCATCCAGGCCAAGGAGATTCTCAAGCTGCGCGACCGCCTCAACAAGATCTACCAGAAGCACACCGGCCAGGAGATCGACAAGATCGAGCAGTGCATGGAGCGCGACCTCTTCATGGACCCCGAGGAGGCGCGCGATTGGGGGCTCATCGACGAGGTAATTGAGAACCGCCCCGCGTCCCTGATACCCGAGGGCGCCACTGGCGTTGACCTGCCGCACCACAGCGCCGCTGGCGTCGGCGGAAGGGGCAGAGATGTCGAGGAGCCCTCCGCGGTGTGA
- >LOC_Os02g42290.1 CDS ATGACGCCCTCCGCCCTCGCCCACCTAGCCTCCGCCTCGCCGCTCCCCGCCTTCTCCCCCAAGCCCAGGGCGAGGCCCGGCTCGGCGGCGGGGCCCGCGCTGCGGCGGCTGGCGGTGGCGGCGCCGGCGCCGCGGGCGTACTTCTCGTCGTCGCCCATGCCGTACCAGCCGCAGCCGCAGCAGCCGGCGGGGTACTCGTCGCACCAGGCGTTCGGCCTGGTGCCGATGGTCATCGAGACCACCTCGCGCGGGGAGAGGGCGTACGACATCTTCTCGCGCCTGCTCAAGGAGCGGATCGTGCTCATCCACGGGCCAATCGCCGACGAGACCGCCTCGCTCGTCGTCGCGCAGCTGCTCTTCCTCGAGTCGGAGAACCCGCTCAAGCCGGTCCACCTCTACATCAACTCCCCGGGCGGGGTCGTCACCGCGGGGCTCGCGATCTACGACACCATGCAGTACATCCGCTGCCCCGTCACCACGCTCTGCATCGGCCAGGCCACCGACATCGCCATCCAGGCCAAGGAGATTCTCAAGCTGCGCGACCGCCTCAACAAGATCTACCAGAAGCACACCGGCCAGGAGATCGACAAGATCGAGCAGTGCATGGAGCGCGACCTCTTCATGGACCCCGAGGAGGCGCGCGATTGGGGGCTCATCGACGAGGTAATTGAGAACCGCCCCGCGTCCCTGATACCCGAGGGCGCCACTGGCGTTGACCTGCCGCACCACAGCGCCGCTGGCGTCGGCGGAAGGGGCAGAGATGTCGAGGAGCCCTCCGCGGTGTGA
Protein Sequence
- >LOC_Os02g42290.2 protein MTPSALAHLASASPLPAFSPKPRARPGSAAGPALRRLAVAAPAPRAYFSSSPMPYQPQPQQPAGYSSHQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASLIPEGATGVDLPHHSAAGVGGRGRDVEEPSAV*
- >LOC_Os02g42290.3 protein MTPSALAHLASASPLPAFSPKPRARPGSAAGPALRRLAVAAPAPRAYFSSSPMPYQPQPQQPAGYSSHQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASLIPEGATGVDLPHHSAAGVGGRGRDVEEPSAV*
- >LOC_Os02g42290.1 protein MTPSALAHLASASPLPAFSPKPRARPGSAAGPALRRLAVAAPAPRAYFSSSPMPYQPQPQQPAGYSSHQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIENRPASLIPEGATGVDLPHHSAAGVGGRGRDVEEPSAV*