Gene Details:
- MSU gene ID: LOC_Os02g45810
- RAPdb gene ID: Os02g0682500
- Gene Symbol: OsTTG1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Among 58 differentially expressed transcription factors, OsTTG1 was confirmed to be the one and only WD40 repeat protein regulating anthocyanin biosynthesis in the pericarp.
Function-related keywords:
Literature:
- RNA-seq reveals transcriptional differences in anthocyanin and vitamin biosynthetic pathways between black and white rice . DOI: 10.1016/j.gene.2022.146845 ; PMID: 36038026
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os02g45810.2 cDNA GGCCGGTTGCCGTGGCACGCGCGCGTTGACGCGCCTCCTCCTTCGCCGTCCCTCCTACCTGCTCGGCCTGGCTGCTCGCGTTTTTTACTCTGAACTCCCCGACCCGATCAACCACCGCGGCGCGTGAGTCCATTCATCCCCAAATCCACCCGAGAAAGAAAGGAAGCAAAGCGAAGCGAATCCAACGATTTTTCCCATGGAGCAGCCCAAGCCGCCGTCGGTAGCCGCCTCGGCGGCGGAGGCGCAGAACCCGAACGCCTTCACCTGCGAGCTGCCGCACTCCATCTACGCGCTGGCCTTCTCCCCCTCCGCGCCCGTCCTCGCCGCCGGCAGCTTCCTCGAGGACCTCCACAACCGCGTCTCCCTCCTCTCCTTCGACCCCGTCCACCCCACCGCCGCCTCCTTCCGCGCCCTCCCCGCGCTCTCCTTCGACCACCCCTACCCGCCCACCAAGCTCCAGTTCCACCCGCGCGCCGCCTCCGCGCCCCACCTCCTCGCCTCCTCCTCCGACGCGCTGCGGCTCTGGCTTGCCCCGCTCGACGATCTCGCCGCCACCGCCACCGCCGCCGCGCCCGAGCTCCGCTCCGTCCTCGACAACCGCAAGACATCCGCCTCCGAGTTCTGCGCCCCCCTCACCTCCTTCGACTGGAACGAGGCCGAGCCCCGCCGCATCGGGACCGCCTCCATCGACACCACCTGCACCATCTGGGACATCGAGCGCGGCGTCGTCGAGACGCAGCTCATCGCGCACGACAAGGCCGTGCACGACATCGCCTGGGGGGAGAACGGCATCTTCGCCTCCGTCTCAGCCGACGGCTCCGTCCGCGTCTTCGACCTCCGGGACAAGGAGCATTCCACCATCTTCTACGAGAGCCCCCGCCCGGACACGCCGCTCCTCAGGCTGGCATGGAACCGCTATGACTTCCACTACATGGCCACCCTGCTCATGGACAGCAGCGCCGTCGTCGTGCTCGACATGCGCGCGCCCGGGGTGCCGGTGGCCGAACTACACAGACACCGGGCGTGCGCCAACGCGGTCGCTTGGGCGCCACAGGCCACGAGGCACCTTTGCTCGGCTGGGGACGACGGCCAAGCGCTGATTTGGGAGCTGCCAGCGACGCCCGGCGCAGTGCCGGCCGAGGGGATTGATCCTGTGATGGTGTATGATGCCGGTGCAGAGATAAACCAACTGCAATGGGCGGCAGCTTACCCGGAGTGGATATCGATTGCCTTTGAGAACAAGGTCCAGCTTCTCAGGGTCTGACGAGGTGTAAATTCCCATCACAACAAGAGCCAACAAGGTATTTTGTTCAACATCAAATAAGAAGCGCTAACTAGAAGCAGAACCTAATGTTTTCTGAAGGATGTTCGACTCTGAAGCCTTGGCGTTTCTTCTATTCCATCAGTTCACATGTGTCTTATGTTGGTGATCTCTTGATATATTCATTACTCTACTCTCCTGCTAAGCTACGGAAAGCATGAAACTTGCAGCAAGGATTGATCTTGTGGCCAGCTTTAACTTGAACTTTGTGGAAGTTATCTGTGTTGTGAACATAGAAATATAGATACTAGCCTGCCAGTACAAGAATCAGCTGATGAATGGATAGATGGACTGCTCACTGCTCCTGCATTTAGTCCTGTAGTCATTTTCGTTTTTCTGCTCGTGCTGTGCTATTCATCGCGCTAACTTTCTTCATTTGCTTCTTGATAACATTATCATATGCTAATATAATATTTCCTGGATATTTGATCATGTTTAGGTTGTACAATGTGTCTTCTTTTCATACATATTTCCTGGAGTAGGATTTAGGTAGGGAGTAGGGGGGGTCTTCTCAACCACCAAAGAGGTCTGAAGAGATTATTTCAAACCTGTAATTAAAGCTTTTGAGGGCCTAGCAAAGATTTTGATGCCAACACATTCTCAGTCTTTTTTTATTCTACTCTGTATAACATCTCCATATGTTTTTCGATATTC
- >LOC_Os02g45810.1 cDNA GGCCGGTTGCCGTGGCACGCGCGCGTTGACGCGCCTCCTCCTTCGCCGTCCCTCCTACCTGCTCGGCCTGGCTGCTCGCGTTTTTTACTCTGAACTCCCCGACCCGATCAACCACCGCGGCGCGTGAGTCCATTCATCCCCAAATCCACCCGAGAAAGAAAGGAAGCAAAGCGAAGCGAATCCAACGATTTTTCCCATGGAGCAGCCCAAGCCGCCGTCGGTAGCCGCCTCGGCGGCGGAGGCGCAGAACCCGAACGCCTTCACCTGCGAGCTGCCGCACTCCATCTACGCGCTGGCCTTCTCCCCCTCCGCGCCCGTCCTCGCCGCCGGCAGCTTCCTCGAGGACCTCCACAACCGCGTCTCCCTCCTCTCCTTCGACCCCGTCCACCCCACCGCCGCCTCCTTCCGCGCCCTCCCCGCGCTCTCCTTCGACCACCCCTACCCGCCCACCAAGCTCCAGTTCCACCCGCGCGCCGCCTCCGCGCCCCACCTCCTCGCCTCCTCCTCCGACGCGCTGCGGCTCTGGCTTGCCCCGCTCGACGATCTCGCCGCCACCGCCACCGCCGCCGCGCCCGAGCTCCGCTCCGTCCTCGACAACCGCAAGACATCCGCCTCCGAGTTCTGCGCCCCCCTCACCTCCTTCGACTGGAACGAGGCCGAGCCCCGCCGCATCGGGACCGCCTCCATCGACACCACCTGCACCATCTGGGACATCGAGCGCGGCGTCGTCGAGACGCAGCTCATCGCGCACGACAAGGCCGTGCACGACATCGCCTGGGGGGAGAACGGCATCTTCGCCTCCGTCTCAGCCGACGGCTCCGTCCGCGTCTTCGACCTCCGGGACAAGGAGCATTCCACCATCTTCTACGAGAGCCCCCGCCCGGACACGCCGCTCCTCAGGCTGGCATGGAACCGCTATGACTTCCACTACATGGCCACCCTGCTCATGGACAGCAGCGCCGTCGTCGTGCTCGACATGCGCGCGCCCGGGGTGCCGGTGGCCGAACTACACAGACACCGGGCGTGCGCCAACGCGGTCGCTTGGGCGCCACAGGCCACGAGGCACCTTTGCTCGGCTGGGGACGACGGCCAAGCGCTGATTTGGGAGCTGCCAGCGACGCCCGGCGCAGTGCCGGCCGAGGGGATTGATCCTGTGATGGTGTATGATGCCGGTGCAGAGATAAACCAACTGCAATGGGCGGCAGCTTACCCGGAGTGGATATCGATTGCCTTTGAGAACAAGGTCCAGCTTCTCAGGGTCTGACGAGGTGTAAATTCCCATCACAACAAGAGCCAACAAGGTATTTTGTTCAACATCAAATAAGAAGCGCTAACTAGAAGCAGAACCTAATGTTTTCTGAAGGATGTTCGACTCTGAAGCCTTGGCGTTTCTTCTATTCCATCAGTTCACATGTGTCTTATGTTGGTGATCTCTTGATATATTCATTACTCTACTCTCCTGCTAAGCTACGGAAAGCATGAAACTTGCAGCAAGGATTGATCTTGTGGCCAGCTTTAACTTGAACTTTGTGGAAGTTATCTGTGTTGTGAACATAGAAATATAGATACTAGCCTGCCAGTACAAGAATCAGCTGATGAATGGATAGATGGACTGCTCACTGCTCCTGCATTTAGTCCTGTAGTCATTTTCGTTTTTCTGCTCGTGCTGTGCTATTCATCGCGCTAACTTTCTTCATTTGCTTCTTGATAACATTATCATATGCTAATATAATATTTCCTGGATATTTGATCATGTTTAGGTTGTACAATGTGTCTTCTTTTCATACATATTTCCTGGAGTAGGATTTAGGTAGGGAGTAGGGGGGGTCTTCTCAACCACCAAAGAGGTCTGAAGAGATTATTTCAAACCTGTAATTAAAGCTTTTGAGGGCCTAGCAAAGATTTTGATGCCAACACATTCTCAGTCTTTTTTTATTCTACTCTGTATAACATCTCCATATGTTTTTCGATATTC
CDS Sequence
- >LOC_Os02g45810.2 CDS ATGGAGCAGCCCAAGCCGCCGTCGGTAGCCGCCTCGGCGGCGGAGGCGCAGAACCCGAACGCCTTCACCTGCGAGCTGCCGCACTCCATCTACGCGCTGGCCTTCTCCCCCTCCGCGCCCGTCCTCGCCGCCGGCAGCTTCCTCGAGGACCTCCACAACCGCGTCTCCCTCCTCTCCTTCGACCCCGTCCACCCCACCGCCGCCTCCTTCCGCGCCCTCCCCGCGCTCTCCTTCGACCACCCCTACCCGCCCACCAAGCTCCAGTTCCACCCGCGCGCCGCCTCCGCGCCCCACCTCCTCGCCTCCTCCTCCGACGCGCTGCGGCTCTGGCTTGCCCCGCTCGACGATCTCGCCGCCACCGCCACCGCCGCCGCGCCCGAGCTCCGCTCCGTCCTCGACAACCGCAAGACATCCGCCTCCGAGTTCTGCGCCCCCCTCACCTCCTTCGACTGGAACGAGGCCGAGCCCCGCCGCATCGGGACCGCCTCCATCGACACCACCTGCACCATCTGGGACATCGAGCGCGGCGTCGTCGAGACGCAGCTCATCGCGCACGACAAGGCCGTGCACGACATCGCCTGGGGGGAGAACGGCATCTTCGCCTCCGTCTCAGCCGACGGCTCCGTCCGCGTCTTCGACCTCCGGGACAAGGAGCATTCCACCATCTTCTACGAGAGCCCCCGCCCGGACACGCCGCTCCTCAGGCTGGCATGGAACCGCTATGACTTCCACTACATGGCCACCCTGCTCATGGACAGCAGCGCCGTCGTCGTGCTCGACATGCGCGCGCCCGGGGTGCCGGTGGCCGAACTACACAGACACCGGGCGTGCGCCAACGCGGTCGCTTGGGCGCCACAGGCCACGAGGCACCTTTGCTCGGCTGGGGACGACGGCCAAGCGCTGATTTGGGAGCTGCCAGCGACGCCCGGCGCAGTGCCGGCCGAGGGGATTGATCCTGTGATGGTGTATGATGCCGGTGCAGAGATAAACCAACTGCAATGGGCGGCAGCTTACCCGGAGTGGATATCGATTGCCTTTGAGAACAAGGTCCAGCTTCTCAGGGTCTGA
- >LOC_Os02g45810.1 CDS ATGGAGCAGCCCAAGCCGCCGTCGGTAGCCGCCTCGGCGGCGGAGGCGCAGAACCCGAACGCCTTCACCTGCGAGCTGCCGCACTCCATCTACGCGCTGGCCTTCTCCCCCTCCGCGCCCGTCCTCGCCGCCGGCAGCTTCCTCGAGGACCTCCACAACCGCGTCTCCCTCCTCTCCTTCGACCCCGTCCACCCCACCGCCGCCTCCTTCCGCGCCCTCCCCGCGCTCTCCTTCGACCACCCCTACCCGCCCACCAAGCTCCAGTTCCACCCGCGCGCCGCCTCCGCGCCCCACCTCCTCGCCTCCTCCTCCGACGCGCTGCGGCTCTGGCTTGCCCCGCTCGACGATCTCGCCGCCACCGCCACCGCCGCCGCGCCCGAGCTCCGCTCCGTCCTCGACAACCGCAAGACATCCGCCTCCGAGTTCTGCGCCCCCCTCACCTCCTTCGACTGGAACGAGGCCGAGCCCCGCCGCATCGGGACCGCCTCCATCGACACCACCTGCACCATCTGGGACATCGAGCGCGGCGTCGTCGAGACGCAGCTCATCGCGCACGACAAGGCCGTGCACGACATCGCCTGGGGGGAGAACGGCATCTTCGCCTCCGTCTCAGCCGACGGCTCCGTCCGCGTCTTCGACCTCCGGGACAAGGAGCATTCCACCATCTTCTACGAGAGCCCCCGCCCGGACACGCCGCTCCTCAGGCTGGCATGGAACCGCTATGACTTCCACTACATGGCCACCCTGCTCATGGACAGCAGCGCCGTCGTCGTGCTCGACATGCGCGCGCCCGGGGTGCCGGTGGCCGAACTACACAGACACCGGGCGTGCGCCAACGCGGTCGCTTGGGCGCCACAGGCCACGAGGCACCTTTGCTCGGCTGGGGACGACGGCCAAGCGCTGATTTGGGAGCTGCCAGCGACGCCCGGCGCAGTGCCGGCCGAGGGGATTGATCCTGTGATGGTGTATGATGCCGGTGCAGAGATAAACCAACTGCAATGGGCGGCAGCTTACCCGGAGTGGATATCGATTGCCTTTGAGAACAAGGTCCAGCTTCTCAGGGTCTGA
Protein Sequence
- >LOC_Os02g45810.2 protein MEQPKPPSVAASAAEAQNPNAFTCELPHSIYALAFSPSAPVLAAGSFLEDLHNRVSLLSFDPVHPTAASFRALPALSFDHPYPPTKLQFHPRAASAPHLLASSSDALRLWLAPLDDLAATATAAAPELRSVLDNRKTSASEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENGIFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDMRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPGAVPAEGIDPVMVYDAGAEINQLQWAAAYPEWISIAFENKVQLLRV*
- >LOC_Os02g45810.1 protein MEQPKPPSVAASAAEAQNPNAFTCELPHSIYALAFSPSAPVLAAGSFLEDLHNRVSLLSFDPVHPTAASFRALPALSFDHPYPPTKLQFHPRAASAPHLLASSSDALRLWLAPLDDLAATATAAAPELRSVLDNRKTSASEFCAPLTSFDWNEAEPRRIGTASIDTTCTIWDIERGVVETQLIAHDKAVHDIAWGENGIFASVSADGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMDSSAVVVLDMRAPGVPVAELHRHRACANAVAWAPQATRHLCSAGDDGQALIWELPATPGAVPAEGIDPVMVYDAGAEINQLQWAAAYPEWISIAFENKVQLLRV*