Gene Details:
- MSU gene ID: LOC_Os02g51070
- RAPdb gene ID: Os02g0744700
- Gene Symbol: SSIIB
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.) . DOI: 10.1007/s00299-007-0309-8 ; PMID: 17297616
- Posttranscriptional control of photosynthetic mRNA decay under stress conditions requires 3’ and 5’ untranslated regions and correlates with differential polysome association in rice . DOI: 10.1104/pp.112.194928 ; PMID: 22566494
- Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities . DOI: 10.1073/pnas.0912396106 ; PMID: 20018713
- Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.) . DOI: 10.1007/s00122-010-1423-5 ; PMID: 20737264
Related News:
Gene Resources:
- NCBI ID: AK066446
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os02g51070.1 cDNA AATCTCTTTTCTCTCGTCGTCGTCTCGTCTTCCCACCTCTCGGATTCCCGAGCTCCACACGACACGACCCACCTCGGCCACTCTCCGCCGTCGGTGGCCAGTGGCCTCCACCCCCTCCGTCCCCCGGGGACCACACCGGCGTAACATCAGCCACACCTCCGGCAGATCTTTCCCCCGCCGCTTAATTCACCTCGTGCGCGCGCGGCGCCGCTCGTTGCCTAGCTAGCTAGCTCGGCCGCAATCTAGTAGTAGTAGTAGGAGGAGGAGGAGCGGCGGCGGCGGCGGATCCTATGTCGGGGGCAATCGCTTCCTCGCCGGCGGCTACTCTCTTCCTCGCTGGCTCCTCCTCCTCTTCGCCGCGGCGCAGGCGGAGCAGGGTGAGCGGGGTTTGGTGGCACTTGTATGGTGGCACGGGGCTGCGGTTGCATTGGGAGCGGCGGGGTTTGGTTCGGGACGGAGCCGTCGTGTGCTCGGCGTCGGCCGCCGGTGGTGAGGATGGCGTCGCGAAGGCGAAGACGAAGTCAGCGGGGAGCTCGAAGGCGGTCGCTGTGCAGGGCAGCACGGCCAAGGCTGATCATGTTGAGGATTCAGTTTCATCACCCAAATACGTGAAACCTGCCGTTGCGAAGCAAAATGGAGAGGTTGTGAGCAGAGCTACCAAATCTGATGCACCAGTGTCTAAACCCAAAGTTGACCCGTCAGTTCCTGCTTCCAAGGCTGAAGCTGATGGTAATGCACAAGCTGTGGAATCGAAGGCTGCACTGGACAAGAAGGAAGACGTCGGTGTTGCTGAACCGTTGGAAGCTAAGGCTGATGCTGGTGGAGATGCAGGTGCAGTAAGCTCTGCAGATGATAGTGAGAACAAGGAATCTGGTCCATTGGCAGGGCCAAATGTGATGAATGTCATTGTGGTGGCTTCTGAATGTTCTCCTTTCTGTAAAACAGGTGGTCTTGGAGATGTTGTGGGTGCTTTGCCTAAGGCTCTGGCAAGAAGAGGACATCGTGTTATGGTTGTGATACCAAGATACGGAGAATATGCAGAAGCCAAGGATCTAGGTGTCCGCAAACGTTACAGGGTAGCTGGACAGGATTCAGAAGTGAGTTATTTTCATGCTTTTATCGATGGTGTTGATTTTGTGTTTCTAGAGGCCCCTCCCTTTCGACACCGGCACAATGATATTTATGGAGGAGAAAGATTTGATGTTTTGAAGCGTATGATTTTGTTCTGCAAAGCTGCTGTTGAGGTTCCTTGGTTTGCTCCATGTGGTGGTTCCATCTACGGTGATGGCAATTTAGTCTTCATTGCAAATGATTGGCATACTGCACTTTTACCCGTATATTTGAAGGCATATTACCGAGATAATGGCTTGATGCAGTATACTCGCTCTGTTCTTGTGATACACAACATTGCTCATCAGGGTCGTGGCCCTGTAGATGACTTCGCCACGATGGACTTGCCCGAGCACTACATCGATCATTTCAGACTGTACGACCCCGTCGGCGGTGAGCACAGCAACGTGTTCGCCGCTGGCCTGAAGATGGCTGACCGCGCGGTCACCGTCAGCCATGGCTATCTGTGGGAGATCAAGACAATGGACGGTGGCTGGGGCCTCCACGAGATAATAAACCACAACGACTGGAAGCTGCAGGGCATCGTGAACGGCATCGACATGGCCGAATGGAACCCCGAGGTGGACGAGCACCTGCAGTCCGACGGCTACGCCAACTACACGTTCGAGACGCTGGACACCGGCAAGAAACAGTGCAAGGAGGCGCTGCAGCGGCAGCTGGGCCTGCAGGTCCGCGACGACGTGCCGCTGATCGGGTTCATCGGGCGGCTCGACCACCAGAAGGGCGTGGACATCATCGGCGACGCGATGCCGTGGATCGCCGGGCAGGACGTGCAGGTGGTGATGCTGGGCACGGGGCGGCCGGACCTGGAGGAGATGCTGCGGCGGTTCGAGTCGGAGCACAACGACAAGGTGCGCGGGTGGGTGGGGTTCTCGGTGCAGCTGGCGCACCGGATCACGGCGGGCGCCGACGTCCTCCTGATGCCGTCGCGGTTCGAGCCGTGCGGGCTGAACCAGCTGTACGCCATGGCGTACGGCACCGTGCCCGTGGTGCACGCCGTGGGCGGGCTCCGCGACACGGTGGCGCCGTTCGACCCGTTCGCCGACACGGGGCTCGGGTGGACGTTCGACCGCGCCGAGGCGAACCGGATGATCGACGCGCTCGGGCACTGCCTCAACACGTACCGGAACTACAAGGAGAGCTGGAGGGGGCTCCAGGCGCGCGGCATGGCGCAGGACCTCAGCTGGGACCACGCCGCCGAGCTCTACGAGGACGTCCTCGTCAAGGCCAAGTACCAGTGGTGAGCTGGTGGTATTTTTCGCGACGCCTCTGGATCCCGCCGTGGATGGGCGCGCTTTTTCTCTAGGGCGGCTCTGCGTCGGAGACGCTCAGACGCATCGCGCGCGTTCGCGCCCACACGATGACTGGCACGCTGCTGCTGAGACGGCGGCACGCGATGCCATCATGCCACCGGACGGTAGGAGCAACGGTGGAAGTGAACTGTACTACTGGTGCTACACTGCTACTACATGAGATCTGCTCTTATTGGTCACGTACTCACGTTCACGCTGAATTACCGAATGTGTTGTGTCTTGTGTGTGTGTGTTAAAGGCATTGTCCTGGTAAATGGTGGAGACGAGATGGCCGGGTCGCGGGAGTTATATTTGTATATGTTGCCAGCTTTCTGAGTTTTTCAAGCCAGTGCGGCTCTTCAGTGCAGGTTCCAAGCAAGTTCAGTGCCGGATGTTAACCATGTTCTGAATCTTGTCTTTTCTTTCATATAAGCAGTGAAGCACAGGGCTTCTACTGACACTACCATGTCATGCTGCTATTTGGAACTGTGTTAGGGGATAGGAACACCATTAAACAACCCGGGATTCGCGCGCTCGTGTTAATGTCAATGACTAAATGACTGTGTTCCAATAATTGCCATCCCAAGATACTGCACGTACAAGGAAGAAACACAGCCGGAGACATCTCAGTCAGACGGCCATTGCGGCTGCTAGCTCAGTAGTACCAACAGTAGTACTCTATCCGTTTTACGATATAAGACTTTTTAATATTATCTATATTCATATATAGATATCAATAAATCTAGATATATAACTAAATATATATATATGTTTATGGTAA
CDS Sequence
- >LOC_Os02g51070.1 CDS ATGTCGGGGGCAATCGCTTCCTCGCCGGCGGCTACTCTCTTCCTCGCTGGCTCCTCCTCCTCTTCGCCGCGGCGCAGGCGGAGCAGGGTGAGCGGGGTTTGGTGGCACTTGTATGGTGGCACGGGGCTGCGGTTGCATTGGGAGCGGCGGGGTTTGGTTCGGGACGGAGCCGTCGTGTGCTCGGCGTCGGCCGCCGGTGGTGAGGATGGCGTCGCGAAGGCGAAGACGAAGTCAGCGGGGAGCTCGAAGGCGGTCGCTGTGCAGGGCAGCACGGCCAAGGCTGATCATGTTGAGGATTCAGTTTCATCACCCAAATACGTGAAACCTGCCGTTGCGAAGCAAAATGGAGAGGTTGTGAGCAGAGCTACCAAATCTGATGCACCAGTGTCTAAACCCAAAGTTGACCCGTCAGTTCCTGCTTCCAAGGCTGAAGCTGATGGTAATGCACAAGCTGTGGAATCGAAGGCTGCACTGGACAAGAAGGAAGACGTCGGTGTTGCTGAACCGTTGGAAGCTAAGGCTGATGCTGGTGGAGATGCAGGTGCAGTAAGCTCTGCAGATGATAGTGAGAACAAGGAATCTGGTCCATTGGCAGGGCCAAATGTGATGAATGTCATTGTGGTGGCTTCTGAATGTTCTCCTTTCTGTAAAACAGGTGGTCTTGGAGATGTTGTGGGTGCTTTGCCTAAGGCTCTGGCAAGAAGAGGACATCGTGTTATGGTTGTGATACCAAGATACGGAGAATATGCAGAAGCCAAGGATCTAGGTGTCCGCAAACGTTACAGGGTAGCTGGACAGGATTCAGAAGTGAGTTATTTTCATGCTTTTATCGATGGTGTTGATTTTGTGTTTCTAGAGGCCCCTCCCTTTCGACACCGGCACAATGATATTTATGGAGGAGAAAGATTTGATGTTTTGAAGCGTATGATTTTGTTCTGCAAAGCTGCTGTTGAGGTTCCTTGGTTTGCTCCATGTGGTGGTTCCATCTACGGTGATGGCAATTTAGTCTTCATTGCAAATGATTGGCATACTGCACTTTTACCCGTATATTTGAAGGCATATTACCGAGATAATGGCTTGATGCAGTATACTCGCTCTGTTCTTGTGATACACAACATTGCTCATCAGGGTCGTGGCCCTGTAGATGACTTCGCCACGATGGACTTGCCCGAGCACTACATCGATCATTTCAGACTGTACGACCCCGTCGGCGGTGAGCACAGCAACGTGTTCGCCGCTGGCCTGAAGATGGCTGACCGCGCGGTCACCGTCAGCCATGGCTATCTGTGGGAGATCAAGACAATGGACGGTGGCTGGGGCCTCCACGAGATAATAAACCACAACGACTGGAAGCTGCAGGGCATCGTGAACGGCATCGACATGGCCGAATGGAACCCCGAGGTGGACGAGCACCTGCAGTCCGACGGCTACGCCAACTACACGTTCGAGACGCTGGACACCGGCAAGAAACAGTGCAAGGAGGCGCTGCAGCGGCAGCTGGGCCTGCAGGTCCGCGACGACGTGCCGCTGATCGGGTTCATCGGGCGGCTCGACCACCAGAAGGGCGTGGACATCATCGGCGACGCGATGCCGTGGATCGCCGGGCAGGACGTGCAGGTGGTGATGCTGGGCACGGGGCGGCCGGACCTGGAGGAGATGCTGCGGCGGTTCGAGTCGGAGCACAACGACAAGGTGCGCGGGTGGGTGGGGTTCTCGGTGCAGCTGGCGCACCGGATCACGGCGGGCGCCGACGTCCTCCTGATGCCGTCGCGGTTCGAGCCGTGCGGGCTGAACCAGCTGTACGCCATGGCGTACGGCACCGTGCCCGTGGTGCACGCCGTGGGCGGGCTCCGCGACACGGTGGCGCCGTTCGACCCGTTCGCCGACACGGGGCTCGGGTGGACGTTCGACCGCGCCGAGGCGAACCGGATGATCGACGCGCTCGGGCACTGCCTCAACACGTACCGGAACTACAAGGAGAGCTGGAGGGGGCTCCAGGCGCGCGGCATGGCGCAGGACCTCAGCTGGGACCACGCCGCCGAGCTCTACGAGGACGTCCTCGTCAAGGCCAAGTACCAGTGGTGA
Protein Sequence
- >LOC_Os02g51070.1 protein MSGAIASSPAATLFLAGSSSSSPRRRRSRVSGVWWHLYGGTGLRLHWERRGLVRDGAVVCSASAAGGEDGVAKAKTKSAGSSKAVAVQGSTAKADHVEDSVSSPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDPSVPASKAEADGNAQAVESKAALDKKEDVGVAEPLEAKADAGGDAGAVSSADDSENKESGPLAGPNVMNVIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGEYAEAKDLGVRKRYRVAGQDSEVSYFHAFIDGVDFVFLEAPPFRHRHNDIYGGERFDVLKRMILFCKAAVEVPWFAPCGGSIYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGPVDDFATMDLPEHYIDHFRLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKTMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMIDALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLVKAKYQW*