Gene Details:
- MSU gene ID: LOC_Os03g04020
- RAPdb gene ID: Os03g0132200
- Gene Symbol: EXPLA1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- These results suggest that GW2 negatively regulates seed size by targeting EXPLA1 for degradation through its E3 ubiquitin ligase activity.
- GW2 and EXPLA1 colocalized to the nucleus when expressed simultaneously.
Function-related keywords:
Literature:
- GW2 Functions as an E3 Ubiquitin Ligase for Rice Expansin-Like 1 . DOI: 10.3390/ijms19071904 ; PMID: 29958473
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g04020.2 cDNA ACCTCGGTCTCTCTCTTCTCCGAAGCGACCCACACTCCCCGTGCCCGAGCCAGAGAGTATGGCCGTCTCTGTCCGTTGCTGCTTCGGCTCCTCCTCCCTTTCGCACCACGCGCGACTACTCCTCGTCATCGTTGCGTTGCTCGCGCCTCGGCTCGCTTCCGGCTGCGACCGCTGCGTGCGCCGCTCCAGAGCGGCTTACTACACCTCCTCGCTCACGCTGACTGGTATGTCGACACGACGGCTCTGTTTTTGTTCGTGGTTTTGCGTGCAGAGGGAGCGGCCGGATTATGGATCGACTGATTGATTCTGTTCGTTTGTTCTTGCGTGGCACAGCCGGTTCTTGCGGGTATGGCACGGCGGCCGCGACCTTCAACGGCGGCGGATTCCTCGCCGCCGCGGGCCCCGCGCTGTACCGGGGCGGCGTCGGCTGCGGCGCGTGCTACCAGGTGAGATGCAAGGACAAGAAGCTGTGCAGCAACGCGGGCGCCCGTGTCGTCGTCACGGACCGCGCCAGGACGAACCGCACCGGCCTCGTTCTGAGCAGCCCGGCGTTCGCCGCCATGGCCCGCCCCGGCATGGCCGCGTCGCTCACCGAGCTCGCCGCCGTGGACGTCGAGTACAAGAGGGTACCGTGCGAGTACAGGCACAGGAGCCTCTCTGTCAGAGTCGACGAGAGAAGTCGCGGACCCAACGAGCTCACCATCAGCTTCCTCTACCAAGGCGGCCAAACCGACATCGTCGCCGTCGACGTCGCCCAGGTTGGGTCGTCGAGCTGGAAGTTCATGACGAGGGAGCACGGACCGTCGTGGAGCATGGCGAACGCGCCGCCGGGGCCGCTGCAGATGAGGCTGGTGGTGACCGGCGGCTACGACGGGAAGTGGGTGTGGGCCGACCGGGAGGTCCTGCCGAGGCGGTGGCGCGCCGGCGAGGTCTACGACACGGGGGTCCAGATCACTGACATCGCCCAGGAAGGCTGCTTCCCCTGCGACACGCACGAGTGGAAGTAGAAGCCCAGCCACACGTACTTCTCCTGTCGTCACGGCCATTTTGGTTGGGCTTTGATGAGAAAGAAGACGTCTCTCGGCTCGCCTCCAGTAGAGATTTCACTGACCCGATTTAGAGTCCTCCTAATCCCTCGGCAACTTCAGAATTTCCTCCTCCGTTTCTTCTTCTTCTTTTCCAACTTTGTACATGAGCTACTAACTAATGTGTAAAGATAAAATTAAAGCAAGTTACAAACCGTCCCGTCCCATTGGGAGCCTAAACAACTAACGAAAAACGAACCGAATTGGCGCCGCCGTGAAGCAACAACTCTCCTGAGAACGTTTGCAACAACCAACGTATCGCAGTTTCAAAGGGCTCACATGCTGTTGCTGCCTCTGGCCTGGGTGTGTTGCTTCCGGCAACATTCCTCTCTACCCTGAGTCCCTGACACATGGCTTGCTCGGCTGCCTCTGCCTACGGTGTGCTTGGTCATGTTGCCAGGTGCGGAGCTAAAACGAAATGGAGGATGGTACCACTTGCTTAATTTACTTTAGTTTAGATCGAATTTAAGCTGATGCGGATGTCTAAGTTTATATTGAGAGGGTACATACATGATAAGAATAGATAAGATATAGCTAAAATAATTTTCTTAACCGGGTTACTGGCACCCTCCTAATATACAGCCCCTGCACGTTGCTCGTTGCTGTTGGTGGTCA
- >LOC_Os03g04020.1 cDNA ACCTCGGTCTCTCTCTTCTCCGAAGCGACCCACACTCCCCGTGCCCGAGCCAGAGAGTATGGCCGTCTCTGTCCGTTGCTGCTTCGGCTCCTCCTCCCTTTCGCACCACGCGCGACTACTCCTCGTCATCGTTGCGTTGCTCGCGCCTCGGCTCGCTTCCGGCTGCGACCGCTGCGTGCGCCGCTCCAGAGCGGCTTACTACACCTCCTCGCTCACGCTGACTGGTATGTCGACACGACGGCTCTGTTTTTGTTCGTGGTTTTGCGTGCAGAGGGAGCGGCCGGATTATGGATCGACTGATTGATTCTGTTCGTTTGTTCTTGCGTGGCACAGCCGGTTCTTGCGGGTATGGCACGGCGGCCGCGACCTTCAACGGCGGCGGATTCCTCGCCGCCGCGGGCCCCGCGCTGTACCGGGGCGGCGTCGGCTGCGGCGCGTGCTACCAGGTGAGATGCAAGGACAAGAAGCTGTGCAGCAACGCGGGCGCCCGTGTCGTCGTCACGGACCGCGCCAGGACGAACCGCACCGGCCTCGTTCTGAGCAGCCCGGCGTTCGCCGCCATGGCCCGCCCCGGCATGGCCGCGTCGCTCACCGAGCTCGCCGCCGTGGACGTCGAGTACAAGAGGGTACCGTGCGAGTACAGGCACAGGAGCCTCTCTGTCAGAGTCGACGAGAGAAGTCGCGGACCCAACGAGCTCACCATCAGCTTCCTCTACCAAGGCGGCCAAACCGACATCGTCGCCGTCGACGTCGCCCAGGTTGGGTCGTCGAGCTGGAAGTTCATGACGAGGGAGCACGGACCGTCGTGGAGCATGGCGAACGCGCCGCCGGGGCCGCTGCAGATGAGGCTGGTGGTGACCGGCGGCTACGACGGGAAGTGGGTGTGGGCCGACCGGGAGGTCCTGCCGAGGCGGTGGCGCGCCGGCGAGGTCTACGACACGGGGGTCCAGATCACTGACATCGCCCAGGAAGGCTGCTTCCCCTGCGACACGCACGAGTGGAAGTAGAAGCCCAGCCACACGTACTTCTCCTGTCGTCACGGCCATTTTGGTTGGGCTTTGATGAGAAAGAAGACGTCTCTCGGCTCGCCTCCAGTAGAGATTTCACTGACCCGATTTAGAGTCCTCCTAATCCCTCGGCAACTTCAGAATTTCCTCCTCCGTTTCTTCTTCTTCTTTTCCAACTTTGTACATGAGCTACTAACTAATGTGTAAAGATAAAATTAAAGCAAGTTACAAACCGTCCCGTCCCATTGGGAGCCTAAACAACTAACGAAAAACGAACCGAATTGGCGCCGCCGTGAAGCAACAACTCTCCTGAGAACGTTTGCAACAACCAACGTATCGCAGTTTCAAAGGGCTCACATGCTGTTGCTGCCTCTGGCCTGGGTGTGTTGCTTCCGGCAACATTCCTCTCTACCCTGAGTCCCTGACACATGGCTTGCTCGGCTGCCTCTGCCTACGGTGTGCTTGGTCATGTTGCCAGGTGCGGAGCTAAAACGAAATGGAGGATGGTACCACTTGCTTAATTTACTTTAGTTTAGATCGAATTTAAGCTGATGCGGATGTCTAAGTTTATATTGAGAGGGTACATACATGATAAGAATAGATAAGATATAGCTAAAATAATTTTCTTAACCGGGTTACTGGCACCCTCCTAATATACAGCCCCTGCACGTTGCTCGTTGCTGTTGGTGGTCA
CDS Sequence
- >LOC_Os03g04020.2 CDS ATGGATCGACTGATTGATTCTGTTCGTTTGTTCTTGCGTGGCACAGCCGGTTCTTGCGGGTATGGCACGGCGGCCGCGACCTTCAACGGCGGCGGATTCCTCGCCGCCGCGGGCCCCGCGCTGTACCGGGGCGGCGTCGGCTGCGGCGCGTGCTACCAGGTGAGATGCAAGGACAAGAAGCTGTGCAGCAACGCGGGCGCCCGTGTCGTCGTCACGGACCGCGCCAGGACGAACCGCACCGGCCTCGTTCTGAGCAGCCCGGCGTTCGCCGCCATGGCCCGCCCCGGCATGGCCGCGTCGCTCACCGAGCTCGCCGCCGTGGACGTCGAGTACAAGAGGGTACCGTGCGAGTACAGGCACAGGAGCCTCTCTGTCAGAGTCGACGAGAGAAGTCGCGGACCCAACGAGCTCACCATCAGCTTCCTCTACCAAGGCGGCCAAACCGACATCGTCGCCGTCGACGTCGCCCAGGTTGGGTCGTCGAGCTGGAAGTTCATGACGAGGGAGCACGGACCGTCGTGGAGCATGGCGAACGCGCCGCCGGGGCCGCTGCAGATGAGGCTGGTGGTGACCGGCGGCTACGACGGGAAGTGGGTGTGGGCCGACCGGGAGGTCCTGCCGAGGCGGTGGCGCGCCGGCGAGGTCTACGACACGGGGGTCCAGATCACTGACATCGCCCAGGAAGGCTGCTTCCCCTGCGACACGCACGAGTGGAAGTAG
- >LOC_Os03g04020.1 CDS ATGGATCGACTGATTGATTCTGTTCGTTTGTTCTTGCGTGGCACAGCCGGTTCTTGCGGGTATGGCACGGCGGCCGCGACCTTCAACGGCGGCGGATTCCTCGCCGCCGCGGGCCCCGCGCTGTACCGGGGCGGCGTCGGCTGCGGCGCGTGCTACCAGGTGAGATGCAAGGACAAGAAGCTGTGCAGCAACGCGGGCGCCCGTGTCGTCGTCACGGACCGCGCCAGGACGAACCGCACCGGCCTCGTTCTGAGCAGCCCGGCGTTCGCCGCCATGGCCCGCCCCGGCATGGCCGCGTCGCTCACCGAGCTCGCCGCCGTGGACGTCGAGTACAAGAGGGTACCGTGCGAGTACAGGCACAGGAGCCTCTCTGTCAGAGTCGACGAGAGAAGTCGCGGACCCAACGAGCTCACCATCAGCTTCCTCTACCAAGGCGGCCAAACCGACATCGTCGCCGTCGACGTCGCCCAGGTTGGGTCGTCGAGCTGGAAGTTCATGACGAGGGAGCACGGACCGTCGTGGAGCATGGCGAACGCGCCGCCGGGGCCGCTGCAGATGAGGCTGGTGGTGACCGGCGGCTACGACGGGAAGTGGGTGTGGGCCGACCGGGAGGTCCTGCCGAGGCGGTGGCGCGCCGGCGAGGTCTACGACACGGGGGTCCAGATCACTGACATCGCCCAGGAAGGCTGCTTCCCCTGCGACACGCACGAGTGGAAGTAG
Protein Sequence
- >LOC_Os03g04020.2 protein MDRLIDSVRLFLRGTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGCFPCDTHEWK*
- >LOC_Os03g04020.1 protein MDRLIDSVRLFLRGTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGCFPCDTHEWK*