Gene Details:

Functional Descriptions:

  • Taking advantage of strategies in biochemistry, molecular cell biology and genetics, the RING-finger containing E3 ligase OsSDIR1 (Oryza sativa SALT-AND DROUGHT-INDUCED RING FINGER 1) was found to be a candidate drought tolerance gene for engineering of crop plants.
  • Upon drought treatment, the OsSDIR1-transgenic rice showed strong drought tolerance compared to control plants.
  • OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice.
  • The expression of OsSDIR1 was detected in all tissues of rice and up-regulated by drought and NaCl, but not by ABA.
  • OsSDIR1 could complement the drought sensitive phenotype of the sdir1 mutant and overexpressing transgenic Arabidopsis were more sensitive to ABA, indicating that the OsSDIR1 gene is a functional ortholog of SDIR1.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os03g16570.3 cDNA ACTGCTCGCTCTCGTTTTCCCCATCCGCACCGGCTGCTCCTCGTCGCGCCGACGCCTCCGCGCGCCAGCGAATCGCCGCCTCGAGAGGCCCCTCGTCGCCGATCAGGGGCGTGGCCTCGTCGAGTTTTTTTGTTCCTCGGAGGGGCGGCAAGGAGGCGGATTTGGAGCAATTCGTAAGACTAGTGGTGGTGGTGGTGGTGGTGGCTGGTTGGCGCCATGAGCTTCGTGTTCCGGGGGAGCAGAGGTGACATCGAGGCCGGAGGCTTCCCGGGGTTCGCCCCGGAGCGCCGCGCCATGGTGAGCGTTTCTGCTTAAATCGGATTCATGCGGGTGGTCGGCCGGTGAACAGCAACCTGGCTTTTCTTGTCACTGTTCTTATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAAGCTGCTGGGAGTGGCCAGCAGGTCTTAAGCTAAAACTACTGACTTAACCCACGGAATGAGGATTAGCTGTTTAGTCTTGAGGAGTGTTTTTGTACATAAAAAAACGTTCACTTCTCTGTGATGTTTATGCATCAAAAGGTTGTGATATTTTTGGTTGACCTGTACCCTGTTCAGTATGAACTCACATACAATCCTTTTTACTCTGTTTCCGTGGGGAAATTGGCGTATTATGGGTGTTTAAGGCTGAAGATCAGTAGAGGATTTAAGATCCAAGAGTAGTGGTCTGGTCTCTATTAGTCTTAAGTAAAAATGATCTTAACTGTTAGTATTATCACAAGTAAAAAGGAGAAACTGATTTATGAGTTCTACCATCATTATATTTTTTTCCTTATTTAGGGCAATTAAGTTTTTGACTATTTTAAAGACTCTTAACTACTAATTTAGCTATGCTTCTATGAGTTTACTAATGTAGCCTCTATACTACGCGCACGCCAGCGTCCAAGCCGAGCAGCGATGCTGTGCACTCCCACTCGACGCGGTCGTGCTGCGACGCTTCAGCCTGGGCCTTGGATGGCAATTAGTCTGGGTTTCTTTTATGTTTCGACTGAATCATTTGTTTTGAACTCAAATATCCCGTATATGAACATCTGGGAAAAGGATAAAGAAATGGCGAT
  • >LOC_Os03g16570.2 cDNA ACTGCTCGCTCTCGTTTTCCCCATCCGCACCGGCTGCTCCTCGTCGCGCCGACGCCTCCGCGCGCCAGCGAATCGCCGCCTCGAGAGGCCCCTCGTCGCCGATCAGGGGCGTGGCCTCGTCGAGTTTTTTTGTTCCTCGGAGGGGCGGCAAGGAGGCGGATTTGGAGCAATTCGTAAGACTAGTGGTGGTGGTGGTGGTGGTGGCTGGTTGGCGCCATGAGCTTCGTGTTCCGGGGGAGCAGAGGTGACATCGAGGCCGGAGGCTTCCCGGGGTTCGCCCCGGAGCGCCGCGCCATGGTGAGCGTTTCTGCTTAAATCGGATTCATGCGGGTGGTCGGCCGGTGAACAGCAACCTGGCTTTTCTTGTCACTGTTCTTATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAAGCTGCTGGGAGTGGCCAGCAGGTCTTAAGCTAAAACTACTGACTTAACCCACGGAATGAGGATTAGCTGTTTAGTCTTGAGGAGTGTTTTTGTACATAAAAAAACGTTCACTTCTCTGTGATGTTTATGCATCAAAAGGTTGTGATATTTTTGGTTGACCTGTACCCTGTTCAGTATGAACTCACATACAATCCTTTTTACTCTGTTTCCGTGGGGAAATTGGCGTATTATGGGTGTTTAAGGCTGAAGATCAGTAGAGGATTTAAGATCCAAGAGTAGTGGTCTGGTCTCTATTAGTCTTAAGTAAAAATGATCTTAACTGTTAGTATTATCACAAGTAAAAAGGAGAAACTGATTTATGAGTTCTACCATCATTATATTTTTTTCCTTATTTAGGGCAATTAAGTTTTTGACTATTTTAAAGACTCTTAACTACTAATTTAGCTATGCTTCTATGAGTTTACTAATGTAGCCTCTATACTACGCGCACGCCAGCGTCCAAGCCGAGCAGCGATGCTGTGCACTCCCACTCGACGCGGTCGTGCTGCGACGCTTCAGCCTGGGCCTTGGATGGCAATTAGTCTGGGTTTCTTTTATGTTTCGACTGAATCATTTGTTTTGAACTCAAATATCCCGTATATGAACATCTGGGAAAAGGATAAAGAAATGGCGAT
  • >LOC_Os03g16570.1 cDNA ACTGCTCGCTCTCGTTTTCCCCATCCGCACCGGCTGCTCCTCGTCGCGCCGACGCCTCCGCGCGCCAGCGAATCGCCGCCTCGAGAGGCCCCTCGTCGCCGATCAGGGGCGTGGCCTCGTCGAGTTTTTTTGTTCCTCGGAGGGGCGGCAAGGAGGCGGATTTGGAGCAATTCGTAAGACTAGTGGTGGTGGTGGTGGTGGTGGCTGGTTGGCGCCATGAGCTTCGTGTTCCGGGGGAGCAGAGGTGACATCGAGGCCGGAGGCTTCCCGGGGTTCGCCCCGGAGCGCCGCGCCATGGTGAGCGTTTCTGCTTAAATCGGATTCATGCGGGTGGTCGGCCGGTGAACAGCAACCTGGCTTTTCTTGTCACTGTTCTTATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAAGCTGCTGGGAGTGGCCAGCAGGTCTTAAGCTAAAACTACTGACTTAACCCACGGAATGAGGATTAGCTGTTTAGTCTTGAGGAGTGTTTTTGTACATAAAAAAACGTTCACTTCTCTGTGATGTTTATGCATCAAAAGGTTGTGATATTTTTGGTTGACCTGTACCCTGTTCAGTATGAACTCACATACAATCCTTTTTACTCTGTTTCCGTGGGGAAATTGGCGTATTATGGGTGTTTAAGGCTGAAGATCAGTAGAGGATTTAAGATCCAAGAGTAGTGGTCTGGTCTCTATTAGTCTTAAGTAAAAATGATCTTAACTGTTAGTATTATCACAAGTAAAAAGGAGAAACTGATTTATGAGTTCTACCATCATTATATTTTTTTCCTTATTTAGGGCAATTAAGTTTTTGACTATTTTAAAGACTCTTAACTACTAATTTAGCTATGCTTCTATGAGTTTACTAATGTAGCCTCTATACTACGCGCACGCCAGCGTCCAAGCCGAGCAGCGATGCTGTGCACTCCCACTCGACGCGGTCGTGCTGCGACGCTTCAGCCTGGGCCTTGGATGGCAATTAGTCTGGGTTTCTTTTATGTTTCGACTGAATCATTTGTTTTGAACTCAAATATCCCGTATATGAACATCTGGGAAAAGGATAAAGAAATGGCGAT
CDS Sequence
  • >LOC_Os03g16570.3 CDS ATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAA
  • >LOC_Os03g16570.2 CDS ATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAA
  • >LOC_Os03g16570.1 CDS ATGTTGTTCATGGTACTGAACTCACACCAGATGTCTCCGAACTTTTTGGTTTGGCTGGTTTTGGGTGTGTTCCTAATGGCCACCAGCCTAAGGATGTACGCCACATGCCAGCAGCTCCAAGCGCAGGCGCAAGCTCACGCTGCAGCTGCCAACGGCTTCCTTGGACACACTGAGCTGCGGGTGCATGTCCCGCCGACCATAGCTCTCGCCACACGAGGCCGTTTGCAGAGCCTTAGGCTCCAACTTGCGCTACTTGACCGCGAGTTCGATGATTTAGATTATGATGCCCTTAGGGCCTTGGATGCAGACAATAGCCCTCATGCTCCTTCGATGAGTGAAGAAGAAATAAATGCTCTTCCTGTATTCAAATACAAGGTTCAGGCACATCAGGGAAGTGCCTCTTTCCGAAAAAGTGATGGACCATCTCAACCATCTGTTTCTTCTACTGAATCTGGCAATGAGAAAAAGCAGGATCGTTTCAAGGCTGATGCAACTGACAACACCCTGGAGGATGAGTTGACATGCAGTGTTTGCTTAGAACAAGTCGTTGTGGGTGATCTATTGAGAAGCCTACCATGCCTGCACCAGTTTCATGCAAACTGCATCGATCCATGGTTGCGCCAACAGGGAACATGCCCAGTTTGCAAGCACCGTGTAAGCGATGGGTGGCATGGTGAAGCAGATGCTTCTAACATGGTATAA
Protein Sequence
  • >LOC_Os03g16570.3 protein MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSDGWHGEADASNMV*
  • >LOC_Os03g16570.2 protein MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSDGWHGEADASNMV*
  • >LOC_Os03g16570.1 protein MLFMVLNSHQMSPNFLVWLVLGVFLMATSLRMYATCQQLQAQAQAHAAAANGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLDREFDDLDYDALRALDADNSPHAPSMSEEEINALPVFKYKVQAHQGSASFRKSDGPSQPSVSSTESGNEKKQDRFKADATDNTLEDELTCSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKHRVSDGWHGEADASNMV*