Gene Details:
- MSU gene ID: LOC_Os03g46610
- RAPdb gene ID: Os03g0669000
- Gene Symbol: DDX47 TOGR1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- microRNAs targeting DEAD-box helicases are involved in salinity stress response in rice (Oryza sativa L.) . DOI: 10.1186/1471-2229-12-183 ; PMID: 23043463
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g46610.1 cDNA CATAATCTCCACGCCTCCTCCTTCCTTCTTTAACCGCCGCCGCCGCAGCTTCATCGCCAAGCCACCTCCGCCGCCGAAGCCACCACCGCTTCCCTCCCACTCGGGCGAGCTCCCCCGTCTCTCCGTAGCCATGGCGAAGAAGAAGGACGTGGAGGTGGAGGAGTTGGATGAGGAGGTGGTTGCCGCTGCCGCCGCCCCCGCCGCGGACGGTGGCGAGGAGCAGGAGGCCGAGCCACCGGCGCGTCGGCCGTCGACGTTCGCGGAGCTGGGCGTCGTCCCGGAGCTGGTGGCGGCGTGCGACGCCATGGGGTGGAAGGAGCCCACCAGGATCCAGGCCGAGGCCATCCCCCACGCCCTCGAAGGGAGGGACCTGATTGGGCTGGGGCAGACGGGCTCCGGCAAGACGGGCGCCTTCGCGCTGCCGATCATCCAGGCGCTGCTCAAGCAGGACAAGCCCCAGGCGTTGTTCGCCTGCGTGCTGTCGCCTACAAGGGAGCTGGCTTTTCAGATTGGACAGCAGTTTGAGGCACTCGGGTCCGCGATCGGTCTGAGTTGCACGGTGCTTGTTGGAGGAGTTGATCGGGTGCAACAAGCAGTATCCCTTGCAAAACGCCCACATATTGTGGTTGGAACTCCTGGACGTCTTTTGGATCATTTGACAGATACGAAAGGTTTTAGCCTTAATAAATTGAAGTACTTGGTTTTGGATGAAGCTGATAAGTTACTTAATGTGGAGTTCCAGAAAGCCCTTGATGATATTCTGAATGTTATCCCTAAAGAACGGAGGACTTTCCTTTTTTCAGCCACAATGACCAATAAGGTTTCTAAACTGCAGCGTGCTTGTCTAAGAAATCCTGTTAAGGTCGAGGTAGCGTCCAAATATTCTACAGTGGACACACTTAGACAGGAGTTTTATTTTGTTCCTGCAGATTACAAGGATTGTTTTCTCGTTCATGTTCTGAATGAGTTGCCAGGGAGCATGATCATGATCTTTGTCCGGACCTGTGAATCAACAAGGCTCCTTGCTCTCACCCTAAGGAATCTTCGTTTTAAAGCTATCTCTATTAGTGGCCAAATGAGTCAGGATAAGAGACTAGGCGCCTTAAACAGGTTCAAAACGAAAGACTGCAATATCCTTATTTGCACCGATGTGGCAAGTCGTGGTCTTGATATTCAAGGAGTTGATGTGGTTATCAATTATGATATTCCAATGAATTCCAAGGATTATGTTCATCGGGTGGGTAGAACAGCACGTGCAGGGAATACAGGATATGCTGTATCTTTGGTGAATCAATACGAGGCCATGTGGTTTAAGATGATAGAGAAGCTCCTTGGATACGAGATTCCTGATCGTAAGGTGGATAACGCAGAAATCATGATACTTCGTGAACGTATCTCTGACTCGAAGAGGATTGCGCTGACGACGATGAAGGAGGGCGGTGGCCACAAGAAAAAGCGGAGGAAGAACGAAGATGATGAGGAAGAGGAGGAGCGCAATGCTCCTGTTTCCAGAAAATCGAAGTCCTTCAACAAATCAAGAAGACGGTGAAAGCATTGGAGCAAGTGATCGTGAGGCGAGCTTGGGATGAGTTAGATTAGTATTATACTGGCATACCACCGCCACAATTTTATGTAACCATTCAAGAATAGATATTTATGTAGGTCCATTTCGACGAATTAGCTATTTTATTATTTGTGAAGCTGGATCTTGGAAAATTTGCTCATCTGTTGCTACAAAAGCATATATGGAAAATTTGCTCATCTGCTTCCACAAAAGCCGGTGGCATCAGGTGATCTGGACGAGAGTCATTGTACTATA
- >LOC_Os03g46610.2 cDNA CATAATCTCCACGCCTCCTCCTTCCTTCTTTAACCGCCGCCGCCGCAGCTTCATCGCCAAGCCACCTCCGCCGCCGAAGCCACCACCGCTTCCCTCCCACTCGGGCGAGCTCCCCCGTCTCTCCGTAGCCATGGCGAAGAAGAAGGACGTGGAGGTGGAGGAGTTGGATGAGGAGGTGGTTGCCGCTGCCGCCGCCCCCGCCGCGGACGGTGGCGAGGAGCAGGAGGCCGAGCCACCGGCGCGTCGGCCGTCGACGTTCGCGGAGCTGGGCGTCGTCCCGGAGCTGGTGGCGGCGTGCGACGCCATGGGGTGGAAGGAGCCCACCAGGATCCAGGCCGAGGCCATCCCCCACGCCCTCGAAGGGAGGGACCTGATTGGGCTGGGGCAGACGGGCTCCGGCAAGACGGGCGCCTTCGCGCTGCCGATCATCCAGGCGCTGCTCAAGCAGGACAAGCCCCAGGCGTTGTTCGCCTGCGTGCTGTCGCCTACAAGGGAGCTGGCTTTTCAGATTGGACAGCAGTTTGAGGCACTCGGGTCCGCGATCGGTCTGAGTTGCACGGTGCTTGTTGGAGGAGTTGATCGGGTGCAACAAGCAGTATCCCTTGCAAAACGCCCACATATTGTGGTTGGAACTCCTGGACGTCTTTTGGATCATTTGACAGATACGAAAGGTTTTAGCCTTAATAAATTGAAGTACTTGGTTTTGGATGAAGCTGATAAGTTACTTAATGTGGAGTTCCAGAAAGCCCTTGATGATATTCTGAATGTTATCCCTAAAGAACGGAGGACTTTCCTTTTTTCAGCCACAATGACCAATAAGGTTTCTAAACTGCAGCGTGCTTGTCTAAGAAATCCTGTTAAGGTCGAGGTAGCGTCCAAATATTCTACAGTGGACACACTTAGACAGGAGTTTTATTTTGTTCCTGCAGATTACAAGGATTGTTTTCTCGTTCATGTTCTGAATGAGTTGCCAGGGAGCATGATCATGATCTTTGTCCGGACCTGTGAATCAACAAGGCTCCTTGCTCTCACCCTAAGGAATCTTCGTTTTAAAGCTATCTCTATTAGTGGCCAAATGAGTCAGGATAAGAGACTAGGCGCCTTAAACAGGTTCAAAACGAAAGACTGCAATATCCTTATTTGCACCGATGTGGCAAGTCGTGGTCTTGATATTCAAGGAGTTGATGTGGTTATCAATTATGATATTCCAATGAATTCCAAGGATTATGTTCATCGGGTGGGTAGAACAGCACGTGCAGGGAATACAGGATATGCTGTATCTTTGGTGAATCAATACGAGGCCATGTGGTTTAAGATGATAGAGAAGCTCCTTGGATACGAGATTCCTGATCGTAAGGTGGATAACGCAGAAATCATGATACTTCGTGAACGTATCTCTGACTCGAAGAGGATTGCGCTGACGACGATGAAGGAGGGCGGTGGCCACAAGAAAAAGCGGAGGAAGAACGAAGATGATGAGGAAGAGGAGGAGCGCAATGCTCCTGTTTCCAGAAAATCGAAGTCCTTCAACAAATCAAGAAGACGGTGAAAGCATTGGAGCAAGTGATCGTGAGGCGAGCTTGGGATGAGTTAGATTAGTATTATACTGGCATACCACCGCCACAATTTTATGTAACCATTCAAGAATAGATATTTATGTAGGTCCATTTCGACGAATTAGCTATTTTATTATTTGTGAAGCTGGATCTTGGAAAATTTGCTCATCTGTTGCTACAAAAGCATATATGGAAAATTTGCTCATCTGCTTCCACAAAAGCCGGTGGCATCAGGTGATCTGGACGAGAGTCATTGTACTATA
CDS Sequence
- >LOC_Os03g46610.1 CDS ATGGCGAAGAAGAAGGACGTGGAGGTGGAGGAGTTGGATGAGGAGGTGGTTGCCGCTGCCGCCGCCCCCGCCGCGGACGGTGGCGAGGAGCAGGAGGCCGAGCCACCGGCGCGTCGGCCGTCGACGTTCGCGGAGCTGGGCGTCGTCCCGGAGCTGGTGGCGGCGTGCGACGCCATGGGGTGGAAGGAGCCCACCAGGATCCAGGCCGAGGCCATCCCCCACGCCCTCGAAGGGAGGGACCTGATTGGGCTGGGGCAGACGGGCTCCGGCAAGACGGGCGCCTTCGCGCTGCCGATCATCCAGGCGCTGCTCAAGCAGGACAAGCCCCAGGCGTTGTTCGCCTGCGTGCTGTCGCCTACAAGGGAGCTGGCTTTTCAGATTGGACAGCAGTTTGAGGCACTCGGGTCCGCGATCGGTCTGAGTTGCACGGTGCTTGTTGGAGGAGTTGATCGGGTGCAACAAGCAGTATCCCTTGCAAAACGCCCACATATTGTGGTTGGAACTCCTGGACGTCTTTTGGATCATTTGACAGATACGAAAGGTTTTAGCCTTAATAAATTGAAGTACTTGGTTTTGGATGAAGCTGATAAGTTACTTAATGTGGAGTTCCAGAAAGCCCTTGATGATATTCTGAATGTTATCCCTAAAGAACGGAGGACTTTCCTTTTTTCAGCCACAATGACCAATAAGGTTTCTAAACTGCAGCGTGCTTGTCTAAGAAATCCTGTTAAGGTCGAGGTAGCGTCCAAATATTCTACAGTGGACACACTTAGACAGGAGTTTTATTTTGTTCCTGCAGATTACAAGGATTGTTTTCTCGTTCATGTTCTGAATGAGTTGCCAGGGAGCATGATCATGATCTTTGTCCGGACCTGTGAATCAACAAGGCTCCTTGCTCTCACCCTAAGGAATCTTCGTTTTAAAGCTATCTCTATTAGTGGCCAAATGAGTCAGGATAAGAGACTAGGCGCCTTAAACAGGTTCAAAACGAAAGACTGCAATATCCTTATTTGCACCGATGTGGCAAGTCGTGGTCTTGATATTCAAGGAGTTGATGTGGTTATCAATTATGATATTCCAATGAATTCCAAGGATTATGTTCATCGGGTGGGTAGAACAGCACGTGCAGGGAATACAGGATATGCTGTATCTTTGGTGAATCAATACGAGGCCATGTGGTTTAAGATGATAGAGAAGCTCCTTGGATACGAGATTCCTGATCGTAAGGTGGATAACGCAGAAATCATGATACTTCGTGAACGTATCTCTGACTCGAAGAGGATTGCGCTGACGACGATGAAGGAGGGCGGTGGCCACAAGAAAAAGCGGAGGAAGAACGAAGATGATGAGGAAGAGGAGGAGCGCAATGCTCCTGTTTCCAGAAAATCGAAGTCCTTCAACAAATCAAGAAGACGGTGA
- >LOC_Os03g46610.2 CDS ATGGCGAAGAAGAAGGACGTGGAGGTGGAGGAGTTGGATGAGGAGGTGGTTGCCGCTGCCGCCGCCCCCGCCGCGGACGGTGGCGAGGAGCAGGAGGCCGAGCCACCGGCGCGTCGGCCGTCGACGTTCGCGGAGCTGGGCGTCGTCCCGGAGCTGGTGGCGGCGTGCGACGCCATGGGGTGGAAGGAGCCCACCAGGATCCAGGCCGAGGCCATCCCCCACGCCCTCGAAGGGAGGGACCTGATTGGGCTGGGGCAGACGGGCTCCGGCAAGACGGGCGCCTTCGCGCTGCCGATCATCCAGGCGCTGCTCAAGCAGGACAAGCCCCAGGCGTTGTTCGCCTGCGTGCTGTCGCCTACAAGGGAGCTGGCTTTTCAGATTGGACAGCAGTTTGAGGCACTCGGGTCCGCGATCGGTCTGAGTTGCACGGTGCTTGTTGGAGGAGTTGATCGGGTGCAACAAGCAGTATCCCTTGCAAAACGCCCACATATTGTGGTTGGAACTCCTGGACGTCTTTTGGATCATTTGACAGATACGAAAGGTTTTAGCCTTAATAAATTGAAGTACTTGGTTTTGGATGAAGCTGATAAGTTACTTAATGTGGAGTTCCAGAAAGCCCTTGATGATATTCTGAATGTTATCCCTAAAGAACGGAGGACTTTCCTTTTTTCAGCCACAATGACCAATAAGGTTTCTAAACTGCAGCGTGCTTGTCTAAGAAATCCTGTTAAGGTCGAGGTAGCGTCCAAATATTCTACAGTGGACACACTTAGACAGGAGTTTTATTTTGTTCCTGCAGATTACAAGGATTGTTTTCTCGTTCATGTTCTGAATGAGTTGCCAGGGAGCATGATCATGATCTTTGTCCGGACCTGTGAATCAACAAGGCTCCTTGCTCTCACCCTAAGGAATCTTCGTTTTAAAGCTATCTCTATTAGTGGCCAAATGAGTCAGGATAAGAGACTAGGCGCCTTAAACAGGTTCAAAACGAAAGACTGCAATATCCTTATTTGCACCGATGTGGCAAGTCGTGGTCTTGATATTCAAGGAGTTGATGTGGTTATCAATTATGATATTCCAATGAATTCCAAGGATTATGTTCATCGGGTGGGTAGAACAGCACGTGCAGGGAATACAGGATATGCTGTATCTTTGGTGAATCAATACGAGGCCATGTGGTTTAAGATGATAGAGAAGCTCCTTGGATACGAGATTCCTGATCGTAAGGTGGATAACGCAGAAATCATGATACTTCGTGAACGTATCTCTGACTCGAAGAGGATTGCGCTGACGACGATGAAGGAGGGCGGTGGCCACAAGAAAAAGCGGAGGAAGAACGAAGATGATGAGGAAGAGGAGGAGCGCAATGCTCCTGTTTCCAGAAAATCGAAGTCCTTCAACAAATCAAGAAGACGGTGA
Protein Sequence
- >LOC_Os03g46610.1 protein MAKKKDVEVEELDEEVVAAAAAPAADGGEEQEAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEERNAPVSRKSKSFNKSRRR*
- >LOC_Os03g46610.2 protein MAKKKDVEVEELDEEVVAAAAAPAADGGEEQEAEPPARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVLNELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEERNAPVSRKSKSFNKSRRR*