Gene Details:
- MSU gene ID: LOC_Os03g51550
- RAPdb gene ID: Os03g0725400
- Gene Symbol: OsWDR5a OsWDR5
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Plants in which OsWDR5a or OsTrx1 expression was decreased by RNA interference produced fewer secondary branches and less grain, and exhibited a delayed heading date under long-day and short-day conditions, whereas loss of OsWDR5a function resulted in embryo lethality.
- OsWDR5a binds to Early heading date 1 (Ehd1) to regulate its H3K4me3 and expression levels.
Function-related keywords:
Literature:
- The COMPASS-Like Complex Promotes Flowering and Panicle Branching in Rice . DOI: 10.1104/pp.17.01749 ; PMID: 29440594
- Overexpressing lncRNA LAIR increases grain yield and regulates neighbouring gene cluster expression in rice . DOI: 10.1038/s41467-018-05829-7 ; PMID: 30158538
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g51550.2 cDNA GAGGAGAGGGAGACGGAGACGAGGGATTTTTTTTCTTTCCCAAGAAATTTCCAAAACCCCAAACCCTTGTTCCCTTCCCCGTCTCCGGTTGGCGCGGCGCGGGGCAATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAAGTGAGTTCTTATTGTCTCGACTGTCATGTAACCTGACTGATGATGGTTGGTAAGCTACTTAGCTTCCAGACTAATTATAGATTGGTGTGGTGGGGAATGTAATTGGATGCTGCTTTATCAGCTTTTCTCCTGGCTTCGTGGGTTGTGTTCTGGTGAACTCTTAATGAATTGGGATGGTTGTAACAAAGCCTGGACATAAAGAATTCTTAAACTTGATCTGCTCCCTTTTGTAGGTTATTTGCCTCTATGTGAAGTTACTATGCCTATGAAAATGCAAAATCAATTGTTCATAGGAGTATATGTTTTGGGGCTGTTGCCTGTTGGATACTTGGGCTTTGCTTTGCACTTTGAGTAGCCTTAGTTGGGCTTACATATGATATATGATGCTACCATTCTATTTGGCCTGCATGTTGACTAGCATGCACCGTAAGATTTACAGTTGTTTGACTAGCATTGGGAATTGGGCTGAACCATCTCTCTGAATAATGGAGCAGCTATTCCCTAAAAGAACTAAAAGAACAATGGGCCATCTGCTGGGAATCTGGGATT
- >LOC_Os03g51550.1 cDNA GAGGAGAGGGAGACGGAGACGAGGGATTTTTTTTCTTTCCCAAGAAATTTCCAAAACCCCAAACCCTTGTTCCCTTCCCCGTCTCCGGTTGGCGCGGCGCGGGGCAATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAAGTGAGTTCTTATTGTCTCGACTGTCATGTAACCTGACTGATGATGGTTGGTAAGCTACTTAGCTTCCAGACTAATTATAGATTGGTGTGGTGGGGAATGTAATTGGATGCTGCTTTATCAGCTTTTCTCCTGGCTTCGTGGGTTGTGTTCTGGTGAACTCTTAATGAATTGGGATGGTTGTAACAAAGCCTGGACATAAAGAATTCTTAAACTTGATCTGCTCCCTTTTGTAGGTTATTTGCCTCTATGTGAAGTTACTATGCCTATGAAAATGCAAAATCAATTGTTCATAGGAGTATATGTTTTGGGGCTGTTGCCTGTTGGATACTTGGGCTTTGCTTTGCACTTTGAGTAGCCTTAGTTGGGCTTACATATGATATATGATGCTACCATTCTATTTGGCCTGCATGTTGACTAGCATGCACCGTAAGATTTACAGTTGTTTGACTAGCATTGGGAATTGGGCTGAACCATCTCTCTGAATAATGGAGCAGCTATTCCCTAAAAGAACTAAAAGAACAATGGGCCATCTGCTGGGAATCTGGGATT
- >LOC_Os03g51550.3 cDNA GAGGAGAGGGAGACGGAGACGAGGGATTTTTTTTCTTTCCCAAGAAATTTCCAAAACCCCAAACCCTTGTTCCCTTCCCCGTCTCCGGTTGGCGCGGCGCGGGGCAATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAAGTGAGTTCTTATTGTCTCGACTGTCATGTAACCTGACTGATGATGGTTGGTAAGCTACTTAGCTTCCAGACTAATTATAGATTGGTGTGGTGGGGAATGTAATTGGATGCTGCTTTATCAGCTTTTCTCCTGGCTTCGTGGGTTGTGTTCTGGTGAACTCTTAATGAATTGGGATGGTTGTAACAAAGCCTGGACATAAAGAATTCTTAAACTTGATCTGCTCCCTTTTGTAGGTTATTTGCCTCTATGTGAAGTTACTATGCCTATGAAAATGCAAAATCAATTGTTCATAGGAGTATATGTTTTGGGGCTGTTGCCTGTTGGATACTTGGGCTTTGCTTTGCACTTTGAGTAGCCTTAGTTGGGCTTACATATGATATATGATGCTACCATTCTATTTGGCCTGCATGTTGACTAGCATGCACCGTAAGATTTACAGTTGTTTGACTAGCATTGGGAATTGGGCTGAACCATCTCTCTGAATAATGGAGCAGCTATTCCCTAAAAGAACTAAAAGAACAATGGGCCATCTGCTGGGAATCTGGGATT
CDS Sequence
- >LOC_Os03g51550.2 CDS ATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAA
- >LOC_Os03g51550.1 CDS ATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAA
- >LOC_Os03g51550.3 CDS ATGGCGGCGGAGGACAACCCGGGGTACGCCCTGCGCGCGACGCTGGCGGGCCACCGCCGCGCCGTGTCCGCCGTCAAGTTCTCCCCCGACGGCCGCCTCCTCGCGTCGGCCTCCGCCGACAAGCTCCTCCGCGTCTGGAGCACCTCCGACCTCGCCAGCCCCGTCGCCGAGCTCGCGGGCCACGGCGAGGGCGTCTCCGACCTCGCCTTCTCCCCCGACGGCCGCCTCATCGCCTCCGCCTCCGACGACCGCACCGTCCGCATCTGGGACCTCGGCGACGGCGGCGGCGGCGGCGGCGGCGGCGAGCCCCGCCTCATGAAGACGCTCTCCGGCCACACCAACTACGCCTTCTGCCTCGCCTTCAGCCCCCACGGCAACATGCTCGCCTCGGGCTCCTTCGACGAGACCGTCCGCGTCTGGGAGGTCAGGTCCGGGAGGTGCCTCCGCGTGCTCCCTGCGCACTCCGAGCCCGTCACCTCCGTCGACTTCAACCGCGACGGCGCCATGATCGTCTCCGGGAGCTACGACGGCCTCTGCCGCATTTGGGACTCCGCCACCGGCCACTGCATCAAGACCCTCATCGACGACGAGAGCCCGCCGGTCTCCTTCGCCAAGTTCTCGCCCAATGGGAAGTTCGTGCTTGCCGCCACTCTTGATAGCAAGCTGAGGCTCTGGAATTTCTCAGCTGGGAAATTTCTTAAGACATATACTGGCCATGTGAACACAAAATACTGCATTCCAGCAGCATTTTCAATCACCAATGGCAAGTATATTGTCAGTGGCTCGGAGGACAAGTGTGTCTACATATGGGATCTTCAGTCAAGAAAGATTTTGCAGAAATTGGAAGGTCATACTGACACAGTCATTGCAGTGTCATGCCACCCCAATGAAAACATGATTGCATCGGGAGGACTTGACGGCGATAAGACGGTGAAAGTATGGGTCCAAAAGGAGGAAGATCAGATGGAAGTCTAA
Protein Sequence
- >LOC_Os03g51550.2 protein MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV*
- >LOC_Os03g51550.1 protein MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV*
- >LOC_Os03g51550.3 protein MAAEDNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYIWDLQSRKILQKLEGHTDTVIAVSCHPNENMIASGGLDGDKTVKVWVQKEEDQMEV*