Gene Details:
- MSU gene ID: LOC_Os03g54770
- RAPdb gene ID: Os03g0754900
- Gene Symbol: OsCstF50 OsWD40-93
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice . DOI: 10.1186/1471-2164-13-100 ; PMID: 22429805
- Survey of rice proteins interacting with OsFCA and OsFY proteins which are homologous to the Arabidopsis flowering time proteins, FCA and FY . DOI: 10.1093/pcp/pcp093 ; PMID: 19561057
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g54770.2 cDNA AGTCCAGACCAGTTCCTAGCTCCGAACAGAGTCCTTCTCCGAAGTGCGAACTCGCTGCAAGCCGAATCCGCCGCGCCGCCACACGGAGACGAGAGGGAGAGGTCGAGAGGGAGAGGGCGAGGGCGAGATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGATTACCTTTTAGCAGGCATTCTTTGCTTCTTTCATTTGATGTAATCC
- >LOC_Os03g54770.3 cDNA AGTCCAGACCAGTTCCTAGCTCCGAACAGAGTCCTTCTCCGAAGTGCGAACTCGCTGCAAGCCGAATCCGCCGCGCCGCCACACGGAGACGAGAGGGAGAGGTCGAGAGGGAGAGGGCGAGGGCGAGATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGATTACCTTTTAGCAGGCATTCTTTGCTTCTTTCATTTGATGTAATCC
- >LOC_Os03g54770.1 cDNA AGTCCAGACCAGTTCCTAGCTCCGAACAGAGTCCTTCTCCGAAGTGCGAACTCGCTGCAAGCCGAATCCGCCGCGCCGCCACACGGAGACGAGAGGGAGAGGTCGAGAGGGAGAGGGCGAGGGCGAGATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGATTACCTTTTAGCAGGCATTCTTTGCTTCTTTCATTTGATGTAATCC
CDS Sequence
- >LOC_Os03g54770.2 CDS ATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGATTACCTTTTAGCAGGCATTCTTTGCTTCTTTCATTTGATGTAA
- >LOC_Os03g54770.3 CDS ATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGATTACCTTTTAGCAGGCATTCTTTGCTTCTTTCATTTGATGTAA
- >LOC_Os03g54770.1 CDS ATGGACGCGGCGGTGCAGGAGGCGAAGCTGCTGCGCCAGGTGAACGCCCTCATCGTGGCGCACCTCCGCGACCACAACCTCACGCAGGCTGCCGCCGCCGTCGCCGCCGCCACCATGACGCCCCTCGCCCCGCCCGAGCCCGACGGCGACGACTCCGTCCCCGCCAACCAGCTCCTCCGCCTCGTCGCCAAGGGCCTCGCGGTGGAGCGGGAGGAGACGGGGAGGGGAGGAGGGGCGTTCGACTCTGCCGCCGCCGCCGCTGGATACGGTGGATTGTTGCCGCCGCTCGGCACCAATGCCGTGGATTTCAGCACGCAGGATGTTAAGGGCTCATCCAAGAGCTTCCCCAAGCACGAGGCCAGGCACGTATCTGATCACAAGAATGTTGTCCGATGTGCAAAATTTAGTCCTGATGGGAAATATTTTGCATCCGGGAGTGGTGACACATCAATTAAGTTCTTCGAGGTTGCTAAAATAAAGCAGATGATGCTAGGGGATTCCAAAGATGGCCCTGTCCGTCCTGTGATCCGTACTTTTTACGATCACACGCAGCCCATCAATGATCTTGATTTTCATCCTGAGAGCCCCATACTGATATCTGCAGCAAAAGACAATACAATAAGGTTCTTCGACTTCTCAAAAACTGTTGCAAGGAAAGCATTCAGAGTTATTCAGGACACTCACAATGTTAGATCCGTATGTTTTCATCCTTGTGGGGATTACCTTTTAGCAGGCATTCTTTGCTTCTTTCATTTGATGTAA
Protein Sequence
- >LOC_Os03g54770.2 protein MDAAVQEAKLLRQVNALIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLRLVAKGLAVEREETGRGGGAFDSAAAAAGYGGLLPPLGTNAVDFSTQDVKGSSKSFPKHEARHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFYDHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQDTHNVRSVCFHPCGDYLLAGILCFFHLM*
- >LOC_Os03g54770.3 protein MDAAVQEAKLLRQVNALIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLRLVAKGLAVEREETGRGGGAFDSAAAAAGYGGLLPPLGTNAVDFSTQDVKGSSKSFPKHEARHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFYDHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQDTHNVRSVCFHPCGDYLLAGILCFFHLM*
- >LOC_Os03g54770.1 protein MDAAVQEAKLLRQVNALIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLRLVAKGLAVEREETGRGGGAFDSAAAAAGYGGLLPPLGTNAVDFSTQDVKGSSKSFPKHEARHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFYDHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQDTHNVRSVCFHPCGDYLLAGILCFFHLM*