Gene Details:
- MSU gene ID: LOC_Os03g60190
- RAPdb gene ID: Os03g0816500
- Gene Symbol: OsALKBH1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- We show that OsALKBH1 may be potentially involved in 6mA demethylation in rice.
Function-related keywords:
Literature:
- Identification and analysis of adenine N6-methylation sites in the rice genome . DOI: 10.1038/s41477-018-0214-x ; PMID: 30061746
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g60190.1 cDNA AAGGTTTGCTCACTTTGTCGCAGCATTTCAAGCTCTCCTAACCTCAGATAAATGATAGCCATTAGAACCCTAGAAGGATCATTATCATTATCCTGAAATAATTCCGGTGAAATTCCTGTGTTCCCAAATAGCAGAGCAAGATTTAATTTCTTGTTAATTATTTTTTAGAAGGAAAGGAGCATTGCGAGTTTTTGGCGCCAAGAAGCAAGAAAGGTCATGGACAGCAGCAAGCAGCAGCTCGCCGTTTGGCCGGTGTCCGCCGCCAAGAAGTACGCCGGCTTCGACGGCAAGGCGGCGGCGAGGGAGCGGTCGGGCCTCGCGAACGCGTCGTTCCGGGTGTACTACAGCCTCCGCGCCGGCGCCGTGCCGTTCCTGTGGGAGTCGTCGCCGGGAACGCCCAAGGCGGCCGCCGTCTCGTCGCCGGCGAGGGAGTCATCATCGGCGGCGCGTGGCGCTCTGCCGCCCATCTCGCCGCCGCCGTCGTACCAGTCGGTCGAGATGAAGAAGGGGGGGAGGTGCCGGCCGAGGTCGTCGTGGCCGGCGGCGGCGGCGGCGGGCGACATCGTGAGGGCGCTGCTCGGCATGCTCGGGCTCGGGAAGTGGCGCCGCCGCCGCCACCACCACCACCGGTCGTCGTCGACGCGACGGCGCTCCGCCTCGGTCTCCGAGCTGCCGCCGTTCGCATCGCTCCCGTATTGACACGTGTACAATCAGATTAATTAATTAATTACAACTTTATTATGGACGGATGATTAATCACGGATGTTGCATGTAAATTACGGAGGCGGATGCCACTTTGCTCTGTGATTATCTCCTAATCTCTCGGGTTTTCGCGTCGTTAATTAGCAGAGTCTGAGTCGGTTTAGCGCACGGTTATAAAACGAGTGGGCACATCGATTTGAAACGAGTCGCGTCGCCGCTGCGTTTCCGAAGAGAAGGCGCCGCTCAAGGGAGAAAGCGTAAAGCCGTTTCCCGCTTTAGTTCTCGCATCCGCGCTAACCCTCGCGGCTTCGTCGATGGTCGGCGGCGGCGGCGGCGGCGGCCACGGGGTCAGGACGCCGGCGAACTTCCCCCCGCGGCAGAAGGCTCGCCTCCCTCGCGGACCGGTTCATGAGAAGTCGTTGGAACAGCAAAAGAAGGGGCCAAGTTCATCCTCTCCTTCAGTTAGCAGTAACAAGTCCCCACTCCAATTGGCTGCAGCAATTGTTCAACCACAGAAACCGCTAGAGTCACCACAGCACATGGTTACACCGGTTCGACTGCAAGAATCTCCAGGCCCAAGAACCATTCCATGCAGTTCTGGATCTGTAGGATCTGGTTCAGGAGCTGCCCCATTTGACATATGCATAAAAAGAGATGATAAGTGCTCCATCAAGTTAAGTCGTTCTTTACTGGAAATCAACAGAGAAAAAAGACGAGAAAGGGAGCAACTTTCCAAGGAGGCAGCTCCATTGCAATATTTGAGACCTGGGATGGTTCTGTTGAAAAAGTTCTTAAAGCATGATGATCAGGTTGACATTATCAGACGCTGCCAGAAACTTGGTATTGGCTCAGGAGGATTTTATACTCCTGGCTACAGAGATGGTGGTAAATTAAGTTTGCAGATGATGTGCTTAGGGAAGAACTGGGATCCAAATTCACGTTCATATGGAGATACACGTCCATTTGATGGTGCTCAACCACCAAGTATACCAGAAGTATTCAGTAAGATAGTTAAAGATGCCATCCAAGCTTCCAATGAATTTTTGAGACAAAAAGCCAGACCTGCCAATGATGTTGAAGAACTTCCTCCACTGTCACCAGATATCTGCCTTGTTAACTTCTATACCAGCAGTGGTAAGTTAGGTCTTCACCAGGACAAAGATGAAACGAAACCCAGCCTTCATAAGGGATTGCCTGTTGTTTCATTTTCGCTAGGTGACACTGCAGAATTCTTGTATGGTGACGTGAACGATGTGGATAAAGCTTCAAAGGTTGATCTGGAATCTGGTGATGTTCTCATATTTGGTGGTAAATCAAGGCTCATATTCCATGGGGTTTCCAGAATCAAACCAAAAACAGCACCAAATTGGCTGACCGATGAAGCAAAACTTCGACCTGGGCGTCTGAACCTCACATTCAGGCAGCATTAGCTTGCCCCGTATTAGATGTAGAGGGAACCTTGTTCTGTTCTGTTGTAGTAGCTCAGTACCCACCCTATTAGCATGAGTTAGCTGGTAGTACATTCGATCTAACTACTGGAAAACTCGAGAAGGAGTCAGATCAAACTATGGAACATATATATATTTAGTGCAATTGATTTTCCTGTGATTATTATTTTTAGATATAATGGAAATCAATCCAGATTTGTGTTGTAGTTTGAAGAGGTGGCATTGCCAGATTTGTGTTCTAATGTAAATTCCTATCGTGACCACTCTTTCAAAATTAAAAGACAATATATACCAAGCCAATTTACCAAATC
- >LOC_Os03g60190.2 cDNA AAGGTTTGCTCACTTTGTCGCAGCATTTCAAGCTCTCCTAACCTCAGATAAATGATAGCCATTAGAACCCTAGAAGGATCATTATCATTATCCTGAAATAATTCCGGTGAAATTCCTGTGTTCCCAAATAGCAGAGCAAGATTTAATTTCTTGTTAATTATTTTTTAGAAGGAAAGGAGCATTGCGAGTTTTTGGCGCCAAGAAGCAAGAAAGGTCATGGACAGCAGCAAGCAGCAGCTCGCCGTTTGGCCGGTGTCCGCCGCCAAGAAGTACGCCGGCTTCGACGGCAAGGCGGCGGCGAGGGAGCGGTCGGGCCTCGCGAACGCGTCGTTCCGGGTGTACTACAGCCTCCGCGCCGGCGCCGTGCCGTTCCTGTGGGAGTCGTCGCCGGGAACGCCCAAGGCGGCCGCCGTCTCGTCGCCGGCGAGGGAGTCATCATCGGCGGCGCGTGGCGCTCTGCCGCCCATCTCGCCGCCGCCGTCGTACCAGTCGGTCGAGATGAAGAAGGGGGGGAGGTGCCGGCCGAGGTCGTCGTGGCCGGCGGCGGCGGCGGCGGGCGACATCGTGAGGGCGCTGCTCGGCATGCTCGGGCTCGGGAAGTGGCGCCGCCGCCGCCACCACCACCACCGGTCGTCGTCGACGCGACGGCGCTCCGCCTCGGTCTCCGAGCTGCCGCCGTTCGCATCGCTCCCGTATTGACACGTGTACAATCAGATTAATTAATTAATTACAACTTTATTATGGACGGATGATTAATCACGGATGTTGCATGTAAATTACGGAGGCGGATGCCACTTTGCTCTGTGATTATCTCCTAATCTCTCGGGTTTTCGCGTCGTTAATTAGCAGAGTCTGAGTCGGTTTAGCGCACGGTTATAAAACGAGTGGGCACATCGATTTGAAACGAGTCGCGTCGCCGCTGCGTTTCCGAAGAGAAGGCGCCGCTCAAGGGAGAAAGCGTAAAGCCGTTTCCCGCTTTAGTTCTCGCATCCGCGCTAACCCTCGCGGCTTCGTCGATGGTCGGCGGCGGCGGCGGCGGCGGCCACGGGGTCAGGACGCCGGCGAACTTCCCCCCGCGGCAGAAGGCTCGCCTCCCTCGCGGACCGGTTCATGAGAAGTCGTTGGAACAGCAAAAGAAGGGGCCAAGTTCATCCTCTCCTTCAGTTAGCAGTAACAAGTCCCCACTCCAATTGGCTGCAGCAATTGTTCAACCACAGAAACCGCTAGAGTCACCACAGCACATGGTTACACCGGTTCGACTGCAAGAATCTCCAGGCCCAAGAACCATTCCATGCAGTTCTGGATCTGTAGGATCTGGTTCAGGAGCTGCCCCATTTGACATATGCATAAAAAGAGATGATAAGTGCTCCATCAAGTTAAGTCGTTCTTTACTGGAAATCAACAGAGAAAAAAGACGAGAAAGGGAGCAACTTTCCAAGGAGGCAGCTCCATTGCAATATTTGAGACCTGGGATGGTTCTGTTGAAAAAGTTCTTAAAGCATGATGATCAGGTTGACATTATCAGACGCTGCCAGAAACTTGGTATTGGCTCAGGAGGATTTTATACTCCTGGCTACAGAGATGGTGGTAAATTAAGTTTGCAGATGATGTGCTTAGGGAAGAACTGGGATCCAAATTCACGTTCATATGGAGATACACGTCCATTTGATGGTGCTCAACCACCAAGTATACCAGAAGTATTCAGTAAGATAGTTAAAGATGCCATCCAAGCTTCCAATGAATTTTTGAGACAAAAAGCCAGACCTGCCAATGATGTTGAAGAACTTCCTCCACTGTCACCAGATATCTGCCTTGTTAACTTCTATACCAGCAGTGGTAAGTTAGGTCTTCACCAGGACAAAGATGAAACGAAACCCAGCCTTCATAAGGGATTGCCTGTTGTTTCATTTTCGCTAGGTGACACTGCAGAATTCTTGTATGGTGACGTGAACGATGTGGATAAAGCTTCAAAGGTTGATCTGGAATCTGGTGATGTTCTCATATTTGGTGGTAAATCAAGGCTCATATTCCATGGGGTTTCCAGAATCAAACCAAAAACAGCACCAAATTGGCTGACCGATGAAGCAAAACTTCGACCTGGGCGTCTGAACCTCACATTCAGGCAGCATTAGCTTGCCCCGTATTAGATGTAGAGGGAACCTTGTTCTGTTCTGTTGTAGTAGCTCAGTACCCACCCTATTAGCATGAGTTAGCTGGTAGTACATTCGATCTAACTACTGGAAAACTCGAGAAGGAGTCAGATCAAACTATGGAACATATATATATTTAGTGCAATTGATTTTCCTGTGATTATTATTTTTAGATATAATGGAAATCAATCCAGATTTGTGTTGTAGTTTGAAGAGGTGGCATTGCCAGATTTGTGTTCTAATGTAAATTCCTATCGTGACCACTCTTTCAAAATTAAAAGACAATATATACCAAGCCAATTTACCAAATC
CDS Sequence
- >LOC_Os03g60190.1 CDS ATGGTCGGCGGCGGCGGCGGCGGCGGCCACGGGGTCAGGACGCCGGCGAACTTCCCCCCGCGGCAGAAGGCTCGCCTCCCTCGCGGACCGGTTCATGAGAAGTCGTTGGAACAGCAAAAGAAGGGGCCAAGTTCATCCTCTCCTTCAGTTAGCAGTAACAAGTCCCCACTCCAATTGGCTGCAGCAATTGTTCAACCACAGAAACCGCTAGAGTCACCACAGCACATGGTTACACCGGTTCGACTGCAAGAATCTCCAGGCCCAAGAACCATTCCATGCAGTTCTGGATCTGTAGGATCTGGTTCAGGAGCTGCCCCATTTGACATATGCATAAAAAGAGATGATAAGTGCTCCATCAAGTTAAGTCGTTCTTTACTGGAAATCAACAGAGAAAAAAGACGAGAAAGGGAGCAACTTTCCAAGGAGGCAGCTCCATTGCAATATTTGAGACCTGGGATGGTTCTGTTGAAAAAGTTCTTAAAGCATGATGATCAGGTTGACATTATCAGACGCTGCCAGAAACTTGGTATTGGCTCAGGAGGATTTTATACTCCTGGCTACAGAGATGGTGGTAAATTAAGTTTGCAGATGATGTGCTTAGGGAAGAACTGGGATCCAAATTCACGTTCATATGGAGATACACGTCCATTTGATGGTGCTCAACCACCAAGTATACCAGAAGTATTCAGTAAGATAGTTAAAGATGCCATCCAAGCTTCCAATGAATTTTTGAGACAAAAAGCCAGACCTGCCAATGATGTTGAAGAACTTCCTCCACTGTCACCAGATATCTGCCTTGTTAACTTCTATACCAGCAGTGGTAAGTTAGGTCTTCACCAGGACAAAGATGAAACGAAACCCAGCCTTCATAAGGGATTGCCTGTTGTTTCATTTTCGCTAGGTGACACTGCAGAATTCTTGTATGGTGACGTGAACGATGTGGATAAAGCTTCAAAGGTTGATCTGGAATCTGGTGATGTTCTCATATTTGGTGGTAAATCAAGGCTCATATTCCATGGGGTTTCCAGAATCAAACCAAAAACAGCACCAAATTGGCTGACCGATGAAGCAAAACTTCGACCTGGGCGTCTGAACCTCACATTCAGGCAGCATTAG
- >LOC_Os03g60190.2 CDS ATGGTCGGCGGCGGCGGCGGCGGCGGCCACGGGGTCAGGACGCCGGCGAACTTCCCCCCGCGGCAGAAGGCTCGCCTCCCTCGCGGACCGGTTCATGAGAAGTCGTTGGAACAGCAAAAGAAGGGGCCAAGTTCATCCTCTCCTTCAGTTAGCAGTAACAAGTCCCCACTCCAATTGGCTGCAGCAATTGTTCAACCACAGAAACCGCTAGAGTCACCACAGCACATGGTTACACCGGTTCGACTGCAAGAATCTCCAGGCCCAAGAACCATTCCATGCAGTTCTGGATCTGTAGGATCTGGTTCAGGAGCTGCCCCATTTGACATATGCATAAAAAGAGATGATAAGTGCTCCATCAAGTTAAGTCGTTCTTTACTGGAAATCAACAGAGAAAAAAGACGAGAAAGGGAGCAACTTTCCAAGGAGGCAGCTCCATTGCAATATTTGAGACCTGGGATGGTTCTGTTGAAAAAGTTCTTAAAGCATGATGATCAGGTTGACATTATCAGACGCTGCCAGAAACTTGGTATTGGCTCAGGAGGATTTTATACTCCTGGCTACAGAGATGGTGGTAAATTAAGTTTGCAGATGATGTGCTTAGGGAAGAACTGGGATCCAAATTCACGTTCATATGGAGATACACGTCCATTTGATGGTGCTCAACCACCAAGTATACCAGAAGTATTCAGTAAGATAGTTAAAGATGCCATCCAAGCTTCCAATGAATTTTTGAGACAAAAAGCCAGACCTGCCAATGATGTTGAAGAACTTCCTCCACTGTCACCAGATATCTGCCTTGTTAACTTCTATACCAGCAGTGGTAAGTTAGGTCTTCACCAGGACAAAGATGAAACGAAACCCAGCCTTCATAAGGGATTGCCTGTTGTTTCATTTTCGCTAGGTGACACTGCAGAATTCTTGTATGGTGACGTGAACGATGTGGATAAAGCTTCAAAGGTTGATCTGGAATCTGGTGATGTTCTCATATTTGGTGGTAAATCAAGGCTCATATTCCATGGGGTTTCCAGAATCAAACCAAAAACAGCACCAAATTGGCTGACCGATGAAGCAAAACTTCGACCTGGGCGTCTGAACCTCACATTCAGGCAGCATTAG
Protein Sequence
- >LOC_Os03g60190.1 protein MVGGGGGGGHGVRTPANFPPRQKARLPRGPVHEKSLEQQKKGPSSSSPSVSSNKSPLQLAAAIVQPQKPLESPQHMVTPVRLQESPGPRTIPCSSGSVGSGSGAAPFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNWLTDEAKLRPGRLNLTFRQH*
- >LOC_Os03g60190.2 protein MVGGGGGGGHGVRTPANFPPRQKARLPRGPVHEKSLEQQKKGPSSSSPSVSSNKSPLQLAAAIVQPQKPLESPQHMVTPVRLQESPGPRTIPCSSGSVGSGSGAAPFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKPSLHKGLPVVSFSLGDTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNWLTDEAKLRPGRLNLTFRQH*