Gene Details:
- MSU gene ID: LOC_Os03g60430
- RAPdb gene ID: Os03g0818800
- Gene Symbol: OsIDS1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Here we demonstrated that SNB and Oryza sativa INDETERMINATE SPIKELET 1 (OsIDS1) together play important roles in inflorescence architecture and the establishment of floral meristems.
- In snb OsIDS1 double mutants, the numbers of branches and spikelets within a panicle are significantly decreased, and the transition to a floral meristem is further delayed compared with the snb single mutant.
- Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.
- Expression analyses showed that SNB and OsIDS1 are required for spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules.
Function-related keywords:
- meristem , architecture , panicle , inflorescence , inflorescence-architecture , floral , spikelet , floral-meristem
Literature:
- Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice . DOI: 10.1111/j.1365-313X.2011.04804.x ; PMID: 22003982
- Histone Deacetylase 701 (HDT701) Induces Flowering in Rice by Modulating Expression of OsIDS1 . DOI: 10.14348/molcells.2018.0148 ; PMID: 29991671
- INDETERMINATE SPIKELET1 Recruits Histone Deacetylase and a Transcriptional Repression Complex to Regulate Rice Salt Tolerance . DOI: 10.1104/pp.18.00324 ; PMID: 30061119
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os03g60430.2 cDNA ATCGAGTATAAGCGCCTAGAAAAACCCACGCAAATGCAAACCCGCTCATCATCGTCTCTCTCCCAAAGGACCAGAGGTTGGGGACTTGGGAGTGGAGACCGGCCATCTCCGGCGAGCCGATCGCCGTGCGACACGTTAGCCACCGCCGCCGTCCCTACCACCGGAGGCGTCCGCTGCGCGTGTGGCCGTAGCGAAATTCTAATCCCCTGTGCGATAGTTTCTCATCTCCTCCCTGAGATACCCTCCTCCGCCACTTCGACGTCCCATCCATCTCTCTCTATTTCCTTTTCTCCCGCTGCTCCCCACCTCTCTCTCTCCTCCTCCTCTTCTTCTTCATCCAACCCCCCATGGCGACCACCACCTGGTGCTGTGGTTGCTGCTGCTCCTGCCTCGCCACCGCTCGAAGCCGGTGAGTGAGTCGTCGTCAGTCGAGGCGCCAACGATCGAGCTGAGCTATAGCCAGGGTGAAGCAGAAGGCGAGGAGAGTTGGTGGTGAGTTGAACTCGATCGAAGTCGGAAGAGCGAGAGAGGGTGGAAGTGTTTGGTTGGGTTGCCGGTGTGGTGAGGATTGGAGATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGACAGACCATCGCGGTTCACGTGTTTGCACGGCGTTCGACTTCGGATCGATCGCCTTGCCGGTGAAACACCATTAACTGTTCTTGCAAATTTATATACAGTATTAAGGCAGTGAGGTAGTACTAGCCAGGTGCATTGACACCCACAGCTCATTGATCTCTCTGTCTTCTCCGTGTTAATACTGCTGCTACTGTACGTATCGTGCCATGAATATAATTAATGAATTCATCATGGGCATGGAGCTTGACAAGTTGTGCTC
- >LOC_Os03g60430.1 cDNA ATCGAGTATAAGCGCCTAGAAAAACCCACGCAAATGCAAACCCGCTCATCATCGTCTCTCTCCCAAAGGACCAGAGGTTGGGGACTTGGGAGTGGAGACCGGCCATCTCCGGCGAGCCGATCGCCGTGCGACACGTTAGCCACCGCCGCCGTCCCTACCACCGGAGGCGTCCGCTGCGCGTGTGGCCGTAGCGAAATTCTAATCCCCTGTGCGATAGTTTCTCATCTCCTCCCTGAGATACCCTCCTCCGCCACTTCGACGTCCCATCCATCTCTCTCTATTTCCTTTTCTCCCGCTGCTCCCCACCTCTCTCTCTCCTCCTCCTCTTCTTCTTCATCCAACCCCCCATGGCGACCACCACCTGGTGCTGTGGTTGCTGCTGCTCCTGCCTCGCCACCGCTCGAAGCCGGTGAGTGAGTCGTCGTCAGTCGAGGCGCCAACGATCGAGCTGAGCTATAGCCAGGGTGAAGCAGAAGGCGAGGAGAGTTGGTGGTGAGTTGAACTCGATCGAAGTCGGAAGAGCGAGAGAGGGTGGAAGTGTTTGGTTGGGTTGCCGGTGTGGTGAGGATTGGAGATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGACAGACCATCGCGGTTCACGTGTTTGCACGGCGTTCGACTTCGGATCGATCGCCTTGCCGGTGAAACACCATTAACTGTTCTTGCAAATTTATATACAGTATTAAGGCAGTGAGGTAGTACTAGCCAGGTGCATTGACACCCACAGCTCATTGATCTCTCTGTCTTCTCCGTGTTAATACTGCTGCTACTGTACGTATCGTGCCATGAATATAATTAATGAATTCATCATGGGCATGGAGCTTGACAAGTTGTGCTC
CDS Sequence
- >LOC_Os03g60430.2 CDS ATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGA
- >LOC_Os03g60430.1 CDS ATGTTGTTGGATCTCAATGTGGAGTCGCCGGAACGGTCCGGCACGTCGAGCTCCTCGGTGCTAAACTCCGGGGACGCCGGAGGCGGCGGTGGCGGTGGCGGTGGCGGAGGATTATTCCGGTTCGACCTCCTCGCGAGCAGCCCCGACGACGACGAGTGCTCCGGGGAGCAGCATCAGTTGCCGGCCGCCTCGGGGATCGTGACGCGTCAGCTCCTCCCGCCTCCGCCTCCCGCGGCGCCGTCGCCGGCGCCGGCGTGGCAGCCGCCGCGCCGCGCGGCGGAGGATGCCGCCCTCGCGCAGCGGCCGGTGGTCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACAGGAGGACCGGCCGCTGGGAGTCGCACATATGGGATTGCGGGAAGCAAGTCTACCTAGGTGGTTTCGACACGGCGCACGCGGCAGCAAGGGCTTACGATCGCGCTGCGATCAAGTTCCGGGGACTGGAGGCTGACATCAACTTCAACCTGAGCGACTACGAGGACGATCTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATACTCCGGCGACAGAGCACGGGATTCGCGAGGGGGAGCTCCAAGTTCCGCGGCGTCACGCTGCACAAGTGCGGCCGCTGGGAGGCACGCATGGGCCAACTTCTTGGCAAGAAGTACATATACCTTGGGCTCTTTGACACCGAAGTTGAAGCTGCAAGAGCATATGACAGGGCAGCTATTCGCTTCAATGGGAGGGAAGCTGTTACCAACTTCGAGCCTGCATCCTACAATGTGGATGCTTTACCAGACGCCGGAAATGAGGCAATTGTTGATGGCGATCTTGATTTGGATTTGCGGATTTCGCAACCTAATGCGCGTGACTCCAAAAGCGATGTCGCCACAACTGGCCTCCAGTTAACTTGTGATTCCCCTGAATCTTCAAATATTACAGTCCACCAGCCAATGGGCTCGTCTCCCCAATGGACTGTGCATCACCAAAGCACACCACTGCCCCCTCAGCATCAACGTTTGTACCCATCTCATTGTCTTGGCTTCCTCCCGAACCTACAGGAGAGGCCAATGGACAGAAGGCCTGAGCTGGGTCCCATGCCGTTCCCAACACAGGCTTGGCAAATGCAGGCCCCTTCTCACTTGCCATTGCTCCACGCTGCAGCATCATCAGGATTCTCTGCCGGCGCCGGCGCCGGCGTCGCCGCCGCCACCCGCCGGCAGCCGCCGTTCCCGGCGGATCACCCCTTCTACTTCCCGCCAACCGCCTGA
Protein Sequence
- >LOC_Os03g60430.2 protein MLLDLNVESPERSGTSSSSVLNSGDAGGGGGGGGGGGLFRFDLLASSPDDDECSGEQHQLPAASGIVTRQLLPPPPPAAPSPAPAWQPPRRAAEDAALAQRPVVAKKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGREAVTNFEPASYNVDALPDAGNEAIVDGDLDLDLRISQPNARDSKSDVATTGLQLTCDSPESSNITVHQPMGSSPQWTVHHQSTPLPPQHQRLYPSHCLGFLPNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLHAAASSGFSAGAGAGVAAATRRQPPFPADHPFYFPPTA*
- >LOC_Os03g60430.1 protein MLLDLNVESPERSGTSSSSVLNSGDAGGGGGGGGGGGLFRFDLLASSPDDDECSGEQHQLPAASGIVTRQLLPPPPPAAPSPAPAWQPPRRAAEDAALAQRPVVAKKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGREAVTNFEPASYNVDALPDAGNEAIVDGDLDLDLRISQPNARDSKSDVATTGLQLTCDSPESSNITVHQPMGSSPQWTVHHQSTPLPPQHQRLYPSHCLGFLPNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLHAAASSGFSAGAGAGVAAATRRQPPFPADHPFYFPPTA*