Gene Details:

Functional Descriptions:

  • Using Ecotype Targeting Induced Local Lesions IN Genomes (EcoTILLING) and TILLING as forward genetic tools, we identified the causative mutation of an EMS mutant characterized by excessive tillering, semi-dwarfism and leaf variegation that corresponded to the PTOX1 gene.
  • The tillering and semi-dwarf phenotypes of the PTOX1 mutant are similar to phenotypes of known strigolactone (SL)-related rice mutants, and both phenotypic traits could be rescued by application of the synthetic SL GR24.
  • The PTOX1 mutant accumulated phytoene in white leaf sectors with a corresponding deficiency in beta-carotene, consistent with the expected function of PTOX1 in promoting phytoene desaturase activity.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os03g63010.1 cDNA TTTTTTACACTATGGGTTCCACCTGGTTCACACGCGCGGGGGCGGCGGACGGAGGGAGGGACGGCGCCGCTCGGGAGAGGGAGCGGGAGCGCGTGCGTCGCCGGTGGCCGAGCCGAGCCGAGCTGCGTCGCGGTGGTGCTCTCCGCGGGCGGCGAGATTCAGCCCTGACCCGAGGAAGGTGAGGGGAATTCTTCCTCGGGGGTGGGTTTGGTGCATTCCGTGGTGTGAGATGCGGGGGATGAACAAGGCTTTCGGGGTTTGGGATGTCGCGGGGATTTGGGGGCGGTGGGTGGTTTTCGGCTGGGAATTTGCGGATTTCGTGGCTGCTAGTGGTGTTCCCGTGGCTTTACGAACAGATGTATATGCTTGATCTCGTGCGGCTTTCCCTTCTATCCCTCTCTCCATGGTTTGCTCGCGTTGGGGGGTTTCGAAAAATTTTCCCTACTGTTAGTCCTCGATTCTGGTCGTCGGCATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAAAGGTGCACTTTGCTGAGAGCTGGAATGAGTTCCATCACCTCTTAATCATGGAAGTACGTCTCTAGCTCTTTCTGTCTGCACATCAGTGCATTTATATATGCTGTTTCTTCCTGTTTTGATGTCCTTTTAGATTATGTTAGCTGTTAGCATATCCCGTTTTCTTTAACTGAATATAATCTTTAAAGGAATTCAACCTACTGCTTATTGACACATTATCTGTTTTTTTTTAATATTTTGGTTATGGTCTTTGATGTTCTGACTTTATTCCTCATCTTGGTTCATATTAGGAATTGGGTGGCAACTCTTTATGAGTTGATCGTTTTCTTGCATGGTTTGCTGCATTTTTTTACTACTTCATGACTGTTGCGATGTCACGAGCCCCGGCGTAAGAACGTATGGGATATGAATGTGTGATTGGCGGTGGACGAGGGGGTTTGGTGGAACGACGACCCGTGATGAACAGCAAGGGATGAGCAAATAGAGAATAGGAGATGAGAGAACTAGAGATTGAATCTGCTTAATTAAACGCCACCGAAACTGTGCCTCTAAATAGGCGTACACGAATTAACCAATGTGCTAAAAACAAGCTAACAAACTGATAAACAGACTAACAATCTGAACTCATCCAATCGCCGCACTGTAGTCATCCGGCACGCAGCTTCCGCGCGCTACTCCGCCGTTCCGCCCGGCGACGCTTGCGGAACCACACGCCCTCTGCGACGATACGTAATCCCGACCATGACATGCGATGTACATGGTGAGCCCAAGAATGGCATGTAAGTGTGCACCTATGCCAATTATGAAGTAAAACACTTCATTTTTATTTCCATGCCTTTTATGTAATGATAACGCTTGGAATTGTTTATCTTATATACATACCGCTTTTCTGAATGTGTTGAGAGGCATGCGTACTCAACCTATGACAAGTTTATTAAGCTCCATGAAGGTAATAAAACGTTGATGGATTTGACATCTCTCCTGTCGTGCAAAATTTTATCATGACAACTAGACATCTCAAAATTTTTGTTGCTTTATCTAGGTTGGACAGACTTTGTAAACCAAAGTGGAAATGAGGGGACCGGGAAAACTAAGTATTTACTTTTTTTATAGGGATAAGTTTATGCCTACCTTTTGTCACAGATTGCCCTTGTGTGAATAATTTGATACATGCGCCAGTGAACTTATGTTATATCAGCTATTTACTTCAATTATTGGCAATCAGGATTCAGGCATGGTGTTTATTTTAGTTTTATAGGTATCGTGTGCATAAATTCAAAAACATGTATTATTCTTCCATTTTTGATTAAGATGTCGGCTCTGGTATCCTTTTATGATGTACTATATTTAGATTTTTTTTCCGTCCTACATAGTGGTTACTTGAATTGTGGGAGAGTTGAAACATACCTGAAAAAATTAGCAAAGCTAGATCCCCTAAGGTCTGAACACCAAACTGGTAGACTCTTTGCATTACTATCCATTCAGAAGTTGATGCATTGTACATTTTAAAGGGTGCATTTTAATAAACCAAAATGTTGAACACTGCAACCAATAACACCATGTCTACCCGACCTGTCCACCAACTAGAAATTTACAGGAACATCACACTCTGTCAATTATATTTACGTATTTCTTGGCAAAATAACATCCTGATCTGACCTTTGACTGCAGAAATGTAGCTGATGCCATGCCTGCATGCCACCCATGAGTGGCATACCTAATATCAATATCAAGGAATGACTTCCTGTAGTGCTCTTCTTCCTTGAGAGCACACGCAATAAGCTATCAAAGAGTATACAGCTTTTCCAAGAAAACGAAAGGGAACGACAGAGAATTGCCACTCTCTAACCCAAGAAATATCACAGTTGCAAGATCTTGGCAGCACACTTATTGAGTTGTGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATGTTACGTCTTTGATTTCAGTCTCACCAAATACAAAAATGCCCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGTTTACAATTGATCGACCATTTTATGTTCTTTTGCTTTATTTGGATTGTCATTGAAGCTAACTTAATTTTTCTGTAAAATCCGGTTGAGGTTAAGAGGTTGAATTCTTCTGATCATTGTCAATACAACTATAGCGATTCATTGAGGGTAAGAGCTCACATAACTTTTATGTGCTTTACT
  • >LOC_Os03g63010.2 cDNA TTTTTTACACTATGGGTTCCACCTGGTTCACACGCGCGGGGGCGGCGGACGGAGGGAGGGACGGCGCCGCTCGGGAGAGGGAGCGGGAGCGCGTGCGTCGCCGGTGGCCGAGCCGAGCCGAGCTGCGTCGCGGTGGTGCTCTCCGCGGGCGGCGAGATTCAGCCCTGACCCGAGGAAGGTGAGGGGAATTCTTCCTCGGGGGTGGGTTTGGTGCATTCCGTGGTGTGAGATGCGGGGGATGAACAAGGCTTTCGGGGTTTGGGATGTCGCGGGGATTTGGGGGCGGTGGGTGGTTTTCGGCTGGGAATTTGCGGATTTCGTGGCTGCTAGTGGTGTTCCCGTGGCTTTACGAACAGATGTATATGCTTGATCTCGTGCGGCTTTCCCTTCTATCCCTCTCTCCATGGTTTGCTCGCGTTGGGGGGTTTCGAAAAATTTTCCCTACTGTTAGTCCTCGATTCTGGTCGTCGGCATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAAAGGTGCACTTTGCTGAGAGCTGGAATGAGTTCCATCACCTCTTAATCATGGAAGTACGTCTCTAGCTCTTTCTGTCTGCACATCAGTGCATTTATATATGCTGTTTCTTCCTGTTTTGATGTCCTTTTAGATTATGTTAGCTGTTAGCATATCCCGTTTTCTTTAACTGAATATAATCTTTAAAGGAATTCAACCTACTGCTTATTGACACATTATCTGTTTTTTTTTAATATTTTGGTTATGGTCTTTGATGTTCTGACTTTATTCCTCATCTTGGTTCATATTAGGAATTGGGTGGCAACTCTTTATGAGTTGATCGTTTTCTTGCATGGTTTGCTGCATTTTTTTACTACTTCATGACTGTTGCGATGTCACGAGCCCCGGCGTAAGAACGTATGGGATATGAATGTGTGATTGGCGGTGGACGAGGGGGTTTGGTGGAACGACGACCCGTGATGAACAGCAAGGGATGAGCAAATAGAGAATAGGAGATGAGAGAACTAGAGATTGAATCTGCTTAATTAAACGCCACCGAAACTGTGCCTCTAAATAGGCGTACACGAATTAACCAATGTGCTAAAAACAAGCTAACAAACTGATAAACAGACTAACAATCTGAACTCATCCAATCGCCGCACTGTAGTCATCCGGCACGCAGCTTCCGCGCGCTACTCCGCCGTTCCGCCCGGCGACGCTTGCGGAACCACACGCCCTCTGCGACGATACGTAATCCCGACCATGACATGCGATGTACATGGTGAGCCCAAGAATGGCATGTAAGTGTGCACCTATGCCAATTATGAAGTAAAACACTTCATTTTTATTTCCATGCCTTTTATGTAATGATAACGCTTGGAATTGTTTATCTTATATACATACCGCTTTTCTGAATGTGTTGAGAGGCATGCGTACTCAACCTATGACAAGTTTATTAAGCTCCATGAAGGTAATAAAACGTTGATGGATTTGACATCTCTCCTGTCGTGCAAAATTTTATCATGACAACTAGACATCTCAAAATTTTTGTTGCTTTATCTAGGTTGGACAGACTTTGTAAACCAAAGTGGAAATGAGGGGACCGGGAAAACTAAGTATTTACTTTTTTTATAGGGATAAGTTTATGCCTACCTTTTGTCACAGATTGCCCTTGTGTGAATAATTTGATACATGCGCCAGTGAACTTATGTTATATCAGCTATTTACTTCAATTATTGGCAATCAGGATTCAGGCATGGTGTTTATTTTAGTTTTATAGGTATCGTGTGCATAAATTCAAAAACATGTATTATTCTTCCATTTTTGATTAAGATGTCGGCTCTGGTATCCTTTTATGATGTACTATATTTAGATTTTTTTTCCGTCCTACATAGTGGTTACTTGAATTGTGGGAGAGTTGAAACATACCTGAAAAAATTAGCAAAGCTAGATCCCCTAAGGTCTGAACACCAAACTGGTAGACTCTTTGCATTACTATCCATTCAGAAGTTGATGCATTGTACATTTTAAAGGGTGCATTTTAATAAACCAAAATGTTGAACACTGCAACCAATAACACCATGTCTACCCGACCTGTCCACCAACTAGAAATTTACAGGAACATCACACTCTGTCAATTATATTTACGTATTTCTTGGCAAAATAACATCCTGATCTGACCTTTGACTGCAGAAATGTAGCTGATGCCATGCCTGCATGCCACCCATGAGTGGCATACCTAATATCAATATCAAGGAATGACTTCCTGTAGTGCTCTTCTTCCTTGAGAGCACACGCAATAAGCTATCAAAGAGTATACAGCTTTTCCAAGAAAACGAAAGGGAACGACAGAGAATTGCCACTCTCTAACCCAAGAAATATCACAGTTGCAAGATCTTGGCAGCACACTTATTGAGTTGTGGAACCTAATGGACACACCAACTGCTGAACAGAAATGCTTTGACCATGTTACGTCTTTGATTTCAGTCTCACCAAATACAAAAATGCCCCAAGGATGCCTTGCACGTGAACTTATTGAGAAGTTTACAATTGATCGACCATTTTATGTTCTTTTGCTTTATTTGGATTGTCATTGAAGCTAACTTAATTTTTCTGTAAAATCCGGTTGAGGTTAAGAGGTTGAATTCTTCTGATCATTGTCAATACAACTATAGCGATTCATTGAGGGTAAGAGCTCACATAACTTTTATGTGCTTTACT
CDS Sequence
  • >LOC_Os03g63010.1 CDS ATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAA
  • >LOC_Os03g63010.2 CDS ATGGTGGCGGTCGCCTCCGCCTCCCCGCTCACCGCCGCGGCGGCGCCCTCCATGTGCTGCTCGCCGCCCGCCTTCCTCCCTCTCCGTGCGCACCGCAGGAGGATTTTCCGCGCGGAGGCGATGAAGACGCAGCAGGAGAAGAAGCAGACCGAGGTGGCCGTCGAGGAGTCCTTCCCCTTCAGGGAGACGGCTCCTCCTGATGAGCCGCTGGTCACCGCCGAGGAGAGCTGGGTGGTTAAGCTCGAACAGTCTGTGAACATTTTCCTCACGGAGTCAGTCATCACGATACTTGATGGATTGTACCGTGACCGCAACTACGCTAGATTTTTCGTCTTGGAGACGATTGCTAGGGTGCCGTATTTTGGTGAGGATCTCGTCGTACATGCTCGCTATAGCCTGCAGCGTTTATCTCTATGCTTCACATGTATGAAACATTTGGCTGGTGGAGGAGAGCTGATTATATAA
Protein Sequence
  • >LOC_Os03g63010.1 protein MVAVASASPLTAAAAPSMCCSPPAFLPLRAHRRRIFRAEAMKTQQEKKQTEVAVEESFPFRETAPPDEPLVTAEESWVVKLEQSVNIFLTESVITILDGLYRDRNYARFFVLETIARVPYFGEDLVVHARYSLQRLSLCFTCMKHLAGGGELII*
  • >LOC_Os03g63010.2 protein MVAVASASPLTAAAAPSMCCSPPAFLPLRAHRRRIFRAEAMKTQQEKKQTEVAVEESFPFRETAPPDEPLVTAEESWVVKLEQSVNIFLTESVITILDGLYRDRNYARFFVLETIARVPYFGEDLVVHARYSLQRLSLCFTCMKHLAGGGELII*