Gene Details:
- MSU gene ID: LOC_Os04g05050
- RAPdb gene ID: Os04g0137001 ,Os04g0137100 ,Os04g0137201
- Gene Symbol: OsPLL4
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Notably, OsPLL1, OsPLL3, OsPLL4 and OsPLL12 exhibit strong and preferential expression in panicles suggesting that the potential roles of these genes are crucial during rice panicle development.
- Moreover, knockdown of OsPLL3 and OsPLL4 by artificial microRNA (amiRNA) disrupted normal pollen development and resulted in partial male sterility.
Function-related keywords:
Literature:
- Genome-wide identification of the pectate lyase-like (PLL) gene family and functional analysis of two PLL genes in rice . DOI: 10.1007/s00438-018-1466-x ; PMID: 29943288
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g05050.1 cDNA ATGGCGGAGGCGGCGGCGAGGAGGTGGGCGGCGGCGCTGGTGCTGCTGGTGCTTCTCACCGGCACCGTCGAGCTCATCGGCGGCGGAGGCGGGAGCGGCGGGCGGCGGCTTCTCGCTGGCCTCCGGGCCGGGAGCACGGCGGCGGCGAGCGGCACGCGGCGGTGGCTGCGCGACTCGTCCTGGCCGGCGACGGCGGCGGCCGCGGCGGCGGCGAGCAGAGGAGATGACGGTGATGGCGATGAGGCGTCGTCGGCGGCGATGACGGTGCCCGGCGCGGTGGACGACCCGGAGGAGGTGGTCTCGCAAGTGCACATGTCGATCAGGAACAGCACGGCGAGGAGGAAGCTGGGCTACCTGTCGTGCGGCACCGGCAATCCGATCGACGACTGCTGGAGGTGCGACCCGGACTGGCACAAGAATCGCCAGCGGCTCGCCGACTGCGGCATCGGCTTCGGCCGCAACGCCATCGGCGGCCGCGACGGCAAGATCTACGTGGTCACCGACCCCAGCGACGACGACGCGGTGAACCCCAAGAAGGGCACGCTCCGGTACGCCGTCATCCGCGACGAGCCGCTGTGGATCGTCTTCAAGCGCGACATGGTGATCACGCTCAAGCAGGAGCTGATCATGAACAGCTTCAAGACCATCGACGGCCGTGGCGCCAACGTGCACATCGCCAATGGCGCCTGCATCACCATCCAGTACGTCACCAACGTCATCATCCATGGCCTGCACATCCATGACTGCAGGCCCACCGGCAATGCCATGGTCCGGAGCTCGCCCAGCCACTACGGGTGGCGCACCATGGCCGACGGCGACGCCGTCTCCATCTTCGGCGCCAGCCACATCTGGGTTGACCATTGCTCGCTCTCCAACTGCGCCGACGGCCTCATCGACGCCATCATGGGTTCCACTGCAATCACAGTGTCCAACAACTACTTCACCCACCACAATGAGGTGATGCTCCTGGGTCACAGCGATTCCTATGTCAAGGACAAGGCAATGCAGGTCACGATAGCATTCAACCATTTCGGAGAAGGTCTTATTCAGAGAATGCCAAGGTGCAGGCATGGTTACTTCCATGTGGTGAACAATGACTACACCCACTGGGAGATGTACGCAATTGGTGGAAGTGCTGAGCCAACCATCAACAGCCAGGGCAACCGCTACCTTGCTCCGACAAATCCCTTTGCCAAGGAGGTTACAAAGAGGGTTGAGACTGCTCAGACCATCTGGAAGGGCTGGAACTGGAGATCAGAGGGGGATCTCCTCCTGAACGGCGCCTTCTTCACCCCATCAGGTGCAGGCGCCTCGGCCAGCTACTCGCGCGCCTCAAGCCTCGGTGCCAAGTCATCATCCATGGTTGGCACCATCACATCCGGTGCGGGCGCCTTGTCGTGCCGCGGGGGCTCAGCCTGCTAGTGCACACCGGAGAAGAGAAAGAGAGAGTTGCGCAACACCGCAATCGCGCCACGACAACACAAAAGAAACACAAGAATTATAGAAGAAGCTAAAAGCTACTACCGGAACATCGCGGGTTACAGCCTTTTCTTTTCTCTCCCCTTCTCCCTCTCTCTCTCTCTTTTTTGCAGCTTTTGACAATGGTTATATATGACCCTCTCCAAGAAGATTCACCATTTCCTCAACCTCCCCCTGCTCCCAACTGTGAACACTGTCAATGGCAGCAGGCGAGAAGCGTTGCTGATTGAGATTTCGTCGTTCGCTCGGTCTCCTATTAGACATCTGAGTGTGTTGAGTGTGTGTATGTTTTGTGTCGGATCGATGATGATGTCTGCCCCCCTGATCATAGCAAGTGTAATGCGAGATCAGGGGGCGCTCGACGTCTCACAATACCTTTGGTTGTCAAAAGGAAGAGTCTACCACAATGTTTTGTTTTGTGCCTTGGGTTGCAGATGTGTTTGCCGTGCGTGGAGTGAGTGCTACTGCTGTAAAAGACGAAAATATGCATAGTTTACCCTCCTTTCCTCTTCTTCACTGAAAGTTAAAGAGCAGGCTTAATATTTATGTTATACTACTCCCACCTGTCAATTTTCAGATGTTCTTTT
- >LOC_Os04g05050.2 cDNA ATGGCGGAGGCGGCGGCGAGGAGGTGGGCGGCGGCGCTGGTGCTGCTGGTGCTTCTCACCGGCACCGTCGAGCTCATCGGCGGCGGAGGCGGGAGCGGCGGGCGGCGGCTTCTCGCTGGCCTCCGGGCCGGGAGCACGGCGGCGGCGAGCGGCACGCGGCGGTGGCTGCGCGACTCGTCCTGGCCGGCGACGGCGGCGGCCGCGGCGGCGGCGAGCAGAGGAGATGACGGTGATGGCGATGAGGCGTCGTCGGCGGCGATGACGGTGCCCGGCGCGGTGGACGACCCGGAGGAGGTGGTCTCGCAAGTGCACATGTCGATCAGGAACAGCACGGCGAGGAGGAAGCTGGGCTACCTGTCGTGCGGCACCGGCAATCCGATCGACGACTGCTGGAGGTGCGACCCGGACTGGCACAAGAATCGCCAGCGGCTCGCCGACTGCGGCATCGGCTTCGGCCGCAACGCCATCGGCGGCCGCGACGGCAAGATCTACGTGGTCACCGACCCCAGCGACGACGACGCGGTGAACCCCAAGAAGGGCACGCTCCGGTACGCCGTCATCCGCGACGAGCCGCTGTGGATCGTCTTCAAGCGCGACATGGTGATCACGCTCAAGCAGGAGCTGATCATGAACAGCTTCAAGACCATCGACGGCCGTGGCGCCAACGTGCACATCGCCAATGGCGCCTGCATCACCATCCAGTACGTCACCAACGTCATCATCCATGGCCTGCACATCCATGACTGCAGGCCCACCGGCAATGCCATGGTCCGGAGCTCGCCCAGCCACTACGGGTGGCGCACCATGGCCGACGGCGACGCCGTCTCCATCTTCGGCGCCAGCCACATCTGGGTTGACCATTGCTCGCTCTCCAACTGCGCCGACGGCCTCATCGACGCCATCATGGGTTCCACTGCAATCACAGTGTCCAACAACTACTTCACCCACCACAATGAGGTGATGCTCCTGGGTCACAGCGATTCCTATGTCAAGGACAAGGCAATGCAGGTCACGATAGCATTCAACCATTTCGGAGAAGGTCTTATTCAGAGAATGCCAAGGTGCAGGCATGGTTACTTCCATGTGGTGAACAATGACTACACCCACTGGGAGATGTACGCAATTGGTGGAAGTGCTGAGCCAACCATCAACAGCCAGGGCAACCGCTACCTTGCTCCGACAAATCCCTTTGCCAAGGAGGTTACAAAGAGGGTTGAGACTGCTCAGACCATCTGGAAGGGCTGGAACTGGAGATCAGAGGGGGATCTCCTCCTGAACGGCGCCTTCTTCACCCCATCAGGTGCAGGCGCCTCGGCCAGCTACTCGCGCGCCTCAAGCCTCGGTGCCAAGTCATCATCCATGGTTGGCACCATCACATCCGGTGCGGGCGCCTTGTCGTGCCGCGGGGGCTCAGCCTGCTAGTGCACACCGGAGAAGAGAAAGAGAGAGTTGCGCAACACCGCAATCGCGCCACGACAACACAAAAGAAACACAAGAATTATAGAAGAAGCTAAAAGCTACTACCGGAACATCGCGGGTTACAGCCTTTTCTTTTCTCTCCCCTTCTCCCTCTCTCTCTCTCTTTTTTGCAGCTTTTGACAATGGTTATATATGACCCTCTCCAAGAAGATTCACCATTTCCTCAACCTCCCCCTGCTCCCAACTGTGAACACTGTCAATGGCAGCAGGCGAGAAGCGTTGCTGATTGAGATTTCGTCGTTCGCTCGGTCTCCTATTAGACATCTGAGTGTGTTGAGTGTGTGTATGTTTTGTGTCGGATCGATGATGATGTCTGCCCCCCTGATCATAGCAAGTGTAATGCGAGATCAGGGGGCGCTCGACGTCTCACAATACCTTTGGTTGTCAAAAGGAAGAGTCTACCACAATGTTTTGTTTTGTGCCTTGGGTTGCAGATGTGTTTGCCGTGCGTGGAGTGAGTGCTACTGCTGTAAAAGACGAAAATATGCATAGTTTACCCTCCTTTCCTCTTCTTCACTGAAAGTTAAAGAGCAGGCTTAATATTTATGTTATACTACTCCCACCTGTCAATTTTCAGATGTTCTTTT
CDS Sequence
- >LOC_Os04g05050.1 CDS ATGGCGGAGGCGGCGGCGAGGAGGTGGGCGGCGGCGCTGGTGCTGCTGGTGCTTCTCACCGGCACCGTCGAGCTCATCGGCGGCGGAGGCGGGAGCGGCGGGCGGCGGCTTCTCGCTGGCCTCCGGGCCGGGAGCACGGCGGCGGCGAGCGGCACGCGGCGGTGGCTGCGCGACTCGTCCTGGCCGGCGACGGCGGCGGCCGCGGCGGCGGCGAGCAGAGGAGATGACGGTGATGGCGATGAGGCGTCGTCGGCGGCGATGACGGTGCCCGGCGCGGTGGACGACCCGGAGGAGGTGGTCTCGCAAGTGCACATGTCGATCAGGAACAGCACGGCGAGGAGGAAGCTGGGCTACCTGTCGTGCGGCACCGGCAATCCGATCGACGACTGCTGGAGGTGCGACCCGGACTGGCACAAGAATCGCCAGCGGCTCGCCGACTGCGGCATCGGCTTCGGCCGCAACGCCATCGGCGGCCGCGACGGCAAGATCTACGTGGTCACCGACCCCAGCGACGACGACGCGGTGAACCCCAAGAAGGGCACGCTCCGGTACGCCGTCATCCGCGACGAGCCGCTGTGGATCGTCTTCAAGCGCGACATGGTGATCACGCTCAAGCAGGAGCTGATCATGAACAGCTTCAAGACCATCGACGGCCGTGGCGCCAACGTGCACATCGCCAATGGCGCCTGCATCACCATCCAGTACGTCACCAACGTCATCATCCATGGCCTGCACATCCATGACTGCAGGCCCACCGGCAATGCCATGGTCCGGAGCTCGCCCAGCCACTACGGGTGGCGCACCATGGCCGACGGCGACGCCGTCTCCATCTTCGGCGCCAGCCACATCTGGGTTGACCATTGCTCGCTCTCCAACTGCGCCGACGGCCTCATCGACGCCATCATGGGTTCCACTGCAATCACAGTGTCCAACAACTACTTCACCCACCACAATGAGGTGATGCTCCTGGGTCACAGCGATTCCTATGTCAAGGACAAGGCAATGCAGGTCACGATAGCATTCAACCATTTCGGAGAAGGTCTTATTCAGAGAATGCCAAGGTGCAGGCATGGTTACTTCCATGTGGTGAACAATGACTACACCCACTGGGAGATGTACGCAATTGGTGGAAGTGCTGAGCCAACCATCAACAGCCAGGGCAACCGCTACCTTGCTCCGACAAATCCCTTTGCCAAGGAGGTTACAAAGAGGGTTGAGACTGCTCAGACCATCTGGAAGGGCTGGAACTGGAGATCAGAGGGGGATCTCCTCCTGAACGGCGCCTTCTTCACCCCATCAGGTGCAGGCGCCTCGGCCAGCTACTCGCGCGCCTCAAGCCTCGGTGCCAAGTCATCATCCATGGTTGGCACCATCACATCCGGTGCGGGCGCCTTGTCGTGCCGCGGGGGCTCAGCCTGCTAG
- >LOC_Os04g05050.2 CDS ATGGCGGAGGCGGCGGCGAGGAGGTGGGCGGCGGCGCTGGTGCTGCTGGTGCTTCTCACCGGCACCGTCGAGCTCATCGGCGGCGGAGGCGGGAGCGGCGGGCGGCGGCTTCTCGCTGGCCTCCGGGCCGGGAGCACGGCGGCGGCGAGCGGCACGCGGCGGTGGCTGCGCGACTCGTCCTGGCCGGCGACGGCGGCGGCCGCGGCGGCGGCGAGCAGAGGAGATGACGGTGATGGCGATGAGGCGTCGTCGGCGGCGATGACGGTGCCCGGCGCGGTGGACGACCCGGAGGAGGTGGTCTCGCAAGTGCACATGTCGATCAGGAACAGCACGGCGAGGAGGAAGCTGGGCTACCTGTCGTGCGGCACCGGCAATCCGATCGACGACTGCTGGAGGTGCGACCCGGACTGGCACAAGAATCGCCAGCGGCTCGCCGACTGCGGCATCGGCTTCGGCCGCAACGCCATCGGCGGCCGCGACGGCAAGATCTACGTGGTCACCGACCCCAGCGACGACGACGCGGTGAACCCCAAGAAGGGCACGCTCCGGTACGCCGTCATCCGCGACGAGCCGCTGTGGATCGTCTTCAAGCGCGACATGGTGATCACGCTCAAGCAGGAGCTGATCATGAACAGCTTCAAGACCATCGACGGCCGTGGCGCCAACGTGCACATCGCCAATGGCGCCTGCATCACCATCCAGTACGTCACCAACGTCATCATCCATGGCCTGCACATCCATGACTGCAGGCCCACCGGCAATGCCATGGTCCGGAGCTCGCCCAGCCACTACGGGTGGCGCACCATGGCCGACGGCGACGCCGTCTCCATCTTCGGCGCCAGCCACATCTGGGTTGACCATTGCTCGCTCTCCAACTGCGCCGACGGCCTCATCGACGCCATCATGGGTTCCACTGCAATCACAGTGTCCAACAACTACTTCACCCACCACAATGAGGTGATGCTCCTGGGTCACAGCGATTCCTATGTCAAGGACAAGGCAATGCAGGTCACGATAGCATTCAACCATTTCGGAGAAGGTCTTATTCAGAGAATGCCAAGGTGCAGGCATGGTTACTTCCATGTGGTGAACAATGACTACACCCACTGGGAGATGTACGCAATTGGTGGAAGTGCTGAGCCAACCATCAACAGCCAGGGCAACCGCTACCTTGCTCCGACAAATCCCTTTGCCAAGGAGGTTACAAAGAGGGTTGAGACTGCTCAGACCATCTGGAAGGGCTGGAACTGGAGATCAGAGGGGGATCTCCTCCTGAACGGCGCCTTCTTCACCCCATCAGGTGCAGGCGCCTCGGCCAGCTACTCGCGCGCCTCAAGCCTCGGTGCCAAGTCATCATCCATGGTTGGCACCATCACATCCGGTGCGGGCGCCTTGTCGTGCCGCGGGGGCTCAGCCTGCTAG
Protein Sequence
- >LOC_Os04g05050.1 protein MAEAAARRWAAALVLLVLLTGTVELIGGGGGSGGRRLLAGLRAGSTAAASGTRRWLRDSSWPATAAAAAAASRGDDGDGDEASSAAMTVPGAVDDPEEVVSQVHMSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTPSGAGASASYSRASSLGAKSSSMVGTITSGAGALSCRGGSAC*
- >LOC_Os04g05050.2 protein MAEAAARRWAAALVLLVLLTGTVELIGGGGGSGGRRLLAGLRAGSTAAASGTRRWLRDSSWPATAAAAAAASRGDDGDGDEASSAAMTVPGAVDDPEEVVSQVHMSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHIWVDHCSLSNCADGLIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTIWKGWNWRSEGDLLLNGAFFTPSGAGASASYSRASSLGAKSSSMVGTITSGAGALSCRGGSAC*