Gene Details:
- MSU gene ID: LOC_Os04g33200
- RAPdb gene ID: Os04g0404900
- Gene Symbol: RIF1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- A candidate factor that interacts with RF2, a restorer of fertility of Lead rice-type cytoplasmic male sterility in rice . DOI: 10.1186/s12284-014-0021-6 ; PMID: 26224552
Related News:
Gene Resources:
- NCBI ID: AK107531
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g33200.1 cDNA TCCCTCGTCTCGTCTGCTACCTCTCGCTCGCGCGCCCGCCCGAAACCGATCGATCGATCGATCAGGTGCGGGGCGCGCGGTGGCCGTCGGTTGCGGGAGGCGCGCTTCCCATCGAGCGGATTACCGGAAGGCGAGGGAGACACCGATCGAGAGACAGAGGAGGCGAGGCGGTTGCGTTGTTGCGGGCGTTGTTGCGGGCGGGCGGTCAGGGGCGGCGGAGGCGGAGGCGATGGGGGGCTCGTACGAGCTCGTCAGGACGGACGACGCGGCGGGGCACGTCTTGGATCTGGAGGCCGGACGCTGCGCCGCCGTATACCCAAAGGGCGGCGGCGGCGGCGGCGGCATCGCTCCACCACCGGTGCCGTCTCCGCCTTCGTCTCCGGCGTCGGCGCGGCAGCGGCTCGTCTCGCTCGACGTGTTCCGAGGGATCACCGTACTGCTTATGATCCTCGTGGACGATGCTGGCGCGTTTCTTCCAGCAATTAATCACTCGCCATGGGACGGTGTAACCCTGGCTGATTTCGTCATGCCCTTTTTCCTTTTCATTGTTGGAGTCGCTCTAGCTCTAGCGTACAAGAGAGTGCCAAACAAATTGGAGGCAACCAGAAAAGCAATTCTCCGTGCACTGAAGCTGTTTTGTGTTGGTCTTGTTCTTCAAGGTGGATTTTTTCATGGTGTTCGTAGTCTAACTTTCGGAATTGATATGGAAAAAATACGGTTGATGGGTATACTACAGAGAATTGCAATAGCTTACATTGTGACCGCGCTATGTGAAATTTGGCTCAAGGGAGATGATGACGTAGATTCTGGATTTGATCTGCTAAAGAGAAACCGTTATCAACTGTTCATTGGCCTGATCGTCATGATCACATACATGGGCTTCTTGTATGGTACCTACGTTCCTGACTGGGAGTATCGGATATCCGTTCCTGGTTCCACAGAGAAATCTTTCTTTGTGAAATGCAGCGTAAGAGGCGACACTGGACCAGGCTGCAATGCTGTTGGCATGATAGACCGCAAAATCTTGGGCATTCAACATCTGTACTGTCGACCGGTTTACGCCCGATCAAAGCAATGCAGTATAAATTCACCACAAAATGGACCACTTCGTCCTGATGCTCCTTCATGGTGCCAGGCCCCTTTTGATCCTGAAGGGCTTCTCAGCTCTGTGATGGCTATCGTCACCTGCTTGATTGGTCTACAATACGGGCATGTAATCGTACATTTCCAGAAACACAAGGAGAGAATCATGAAATGGCTAATCCCCTCCTTCAGCATGCTAATCCTTGCGTTCTCATTGGACTTCTTTGGAATGCATATGAACAAGCCACTGTACACCGTGAGCTACGCCCTCGCCACCGCCGGCGCCGCGGGCCTCCTGTTCGCCGGAATCTACGCGCTGGTCGACATGTACGGCCACCGGCGGCCGACCGCCGTCATGGAGTGGATGGGGACGCACGCGCTCATGATCTACGTCCTGATCGCGTGCAACATCCTGCCCATCTTCATCCACGGCTTCTACTGGAGGGAGCCCAAGAACAACCTTTTGAGGTTAATCGGAGTTGGGGCATGATCCATGGATGCAGCAGCTAGAAGCCTAGAAGGCACGTATAGAGGCGTATTTAGGACACTATTTGGACAGAGACAAACGAGACATGTGCAGGCCTAGTTTTGCTACAGGCTTAGTTATTGTTGCACAGATTCGTTCTCTCTGAGAGCTCTTTGTATATGGTAAACAACGAGCCTGTGTATATCATGACAATACGATCTAAAAGAAATATATAGTACAGAAAAAATTTTCAGCTGCACA
- >LOC_Os04g33200.2 cDNA TCCCTCGTCTCGTCTGCTACCTCTCGCTCGCGCGCCCGCCCGAAACCGATCGATCGATCGATCAGGTGCGGGGCGCGCGGTGGCCGTCGGTTGCGGGAGGCGCGCTTCCCATCGAGCGGATTACCGGAAGGCGAGGGAGACACCGATCGAGAGACAGAGGAGGCGAGGCGGTTGCGTTGTTGCGGGCGTTGTTGCGGGCGGGCGGTCAGGGGCGGCGGAGGCGGAGGCGATGGGGGGCTCGTACGAGCTCGTCAGGACGGACGACGCGGCGGGGCACGTCTTGGATCTGGAGGCCGGACGCTGCGCCGCCGTATACCCAAAGGGCGGCGGCGGCGGCGGCGGCATCGCTCCACCACCGGTGCCGTCTCCGCCTTCGTCTCCGGCGTCGGCGCGGCAGCGGCTCGTCTCGCTCGACGTGTTCCGAGGGATCACCGTACTGCTTATGATCCTCGTGGACGATGCTGGCGCGTTTCTTCCAGCAATTAATCACTCGCCATGGGACGGTGTAACCCTGGCTGATTTCGTCATGCCCTTTTTCCTTTTCATTGTTGGAGTCGCTCTAGCTCTAGCGTACAAGAGAGTGCCAAACAAATTGGAGGCAACCAGAAAAGCAATTCTCCGTGCACTGAAGCTGTTTTGTGTTGGTCTTGTTCTTCAAGGTGGATTTTTTCATGGTGTTCGTAGTCTAACTTTCGGAATTGATATGGAAAAAATACGGTTGATGGGTATACTACAGAGAATTGCAATAGCTTACATTGTGACCGCGCTATGTGAAATTTGGCTCAAGGGAGATGATGACGTAGATTCTGGATTTGATCTGCTAAAGAGAAACCGTTATCAACTGTTCATTGGCCTGATCGTCATGATCACATACATGGGCTTCTTGTATGGTACCTACGTTCCTGACTGGGAGTATCGGATATCCGTTCCTGGTTCCACAGAGAAATCTTTCTTTGTGAAATGCAGCGTAAGAGGCGACACTGGACCAGGCTGCAATGCTGTTGGCATGATAGACCGCAAAATCTTGGGCATTCAACATCTGTACTGTCGACCGGTTTACGCCCGATCAAAGCAATGCAGTATAAATTCACCACAAAATGGACCACTTCGTCCTGATGCTCCTTCATGGTGCCAGGCCCCTTTTGATCCTGAAGGGCTTCTCAGCTCTGTGATGGCTATCGTCACCTGCTTGATTGGTCTACAATACGGGCATGTAATCGTACATTTCCAGAAACACAAGGAGAGAATCATGAAATGGCTAATCCCCTCCTTCAGCATGCTAATCCTTGCGTTCTCATTGGACTTCTTTGGAATGCATATGAACAAGCCACTGTACACCGTGAGCTACGCCCTCGCCACCGCCGGCGCCGCGGGCCTCCTGTTCGCCGGAATCTACGCGCTGGTCGACATGTACGGCCACCGGCGGCCGACCGCCGTCATGGAGTGGATGGGGACGCACGCGCTCATGATCTACGTCCTGATCGCGTGCAACATCCTGCCCATCTTCATCCACGGCTTCTACTGGAGGGAGCCCAAGAACAACCTTTTGAGGTTAATCGGAGTTGGGGCATGATCCATGGATGCAGCAGCTAGAAGCCTAGAAGGCACGTATAGAGGCGTATTTAGGACACTATTTGGACAGAGACAAACGAGACATGTGCAGGCCTAGTTTTGCTACAGGCTTAGTTATTGTTGCACAGATTCGTTCTCTCTGAGAGCTCTTTGTATATGGTAAACAACGAGCCTGTGTATATCATGACAATACGATCTAAAAGAAATATATAGTACAGAAAAAATTTTCAGCTGCACA
CDS Sequence
- >LOC_Os04g33200.1 CDS ATGGGGGGCTCGTACGAGCTCGTCAGGACGGACGACGCGGCGGGGCACGTCTTGGATCTGGAGGCCGGACGCTGCGCCGCCGTATACCCAAAGGGCGGCGGCGGCGGCGGCGGCATCGCTCCACCACCGGTGCCGTCTCCGCCTTCGTCTCCGGCGTCGGCGCGGCAGCGGCTCGTCTCGCTCGACGTGTTCCGAGGGATCACCGTACTGCTTATGATCCTCGTGGACGATGCTGGCGCGTTTCTTCCAGCAATTAATCACTCGCCATGGGACGGTGTAACCCTGGCTGATTTCGTCATGCCCTTTTTCCTTTTCATTGTTGGAGTCGCTCTAGCTCTAGCGTACAAGAGAGTGCCAAACAAATTGGAGGCAACCAGAAAAGCAATTCTCCGTGCACTGAAGCTGTTTTGTGTTGGTCTTGTTCTTCAAGGTGGATTTTTTCATGGTGTTCGTAGTCTAACTTTCGGAATTGATATGGAAAAAATACGGTTGATGGGTATACTACAGAGAATTGCAATAGCTTACATTGTGACCGCGCTATGTGAAATTTGGCTCAAGGGAGATGATGACGTAGATTCTGGATTTGATCTGCTAAAGAGAAACCGTTATCAACTGTTCATTGGCCTGATCGTCATGATCACATACATGGGCTTCTTGTATGGTACCTACGTTCCTGACTGGGAGTATCGGATATCCGTTCCTGGTTCCACAGAGAAATCTTTCTTTGTGAAATGCAGCGTAAGAGGCGACACTGGACCAGGCTGCAATGCTGTTGGCATGATAGACCGCAAAATCTTGGGCATTCAACATCTGTACTGTCGACCGGTTTACGCCCGATCAAAGCAATGCAGTATAAATTCACCACAAAATGGACCACTTCGTCCTGATGCTCCTTCATGGTGCCAGGCCCCTTTTGATCCTGAAGGGCTTCTCAGCTCTGTGATGGCTATCGTCACCTGCTTGATTGGTCTACAATACGGGCATGTAATCGTACATTTCCAGAAACACAAGGAGAGAATCATGAAATGGCTAATCCCCTCCTTCAGCATGCTAATCCTTGCGTTCTCATTGGACTTCTTTGGAATGCATATGAACAAGCCACTGTACACCGTGAGCTACGCCCTCGCCACCGCCGGCGCCGCGGGCCTCCTGTTCGCCGGAATCTACGCGCTGGTCGACATGTACGGCCACCGGCGGCCGACCGCCGTCATGGAGTGGATGGGGACGCACGCGCTCATGATCTACGTCCTGATCGCGTGCAACATCCTGCCCATCTTCATCCACGGCTTCTACTGGAGGGAGCCCAAGAACAACCTTTTGAGGTTAATCGGAGTTGGGGCATGA
- >LOC_Os04g33200.2 CDS ATGGGGGGCTCGTACGAGCTCGTCAGGACGGACGACGCGGCGGGGCACGTCTTGGATCTGGAGGCCGGACGCTGCGCCGCCGTATACCCAAAGGGCGGCGGCGGCGGCGGCGGCATCGCTCCACCACCGGTGCCGTCTCCGCCTTCGTCTCCGGCGTCGGCGCGGCAGCGGCTCGTCTCGCTCGACGTGTTCCGAGGGATCACCGTACTGCTTATGATCCTCGTGGACGATGCTGGCGCGTTTCTTCCAGCAATTAATCACTCGCCATGGGACGGTGTAACCCTGGCTGATTTCGTCATGCCCTTTTTCCTTTTCATTGTTGGAGTCGCTCTAGCTCTAGCGTACAAGAGAGTGCCAAACAAATTGGAGGCAACCAGAAAAGCAATTCTCCGTGCACTGAAGCTGTTTTGTGTTGGTCTTGTTCTTCAAGGTGGATTTTTTCATGGTGTTCGTAGTCTAACTTTCGGAATTGATATGGAAAAAATACGGTTGATGGGTATACTACAGAGAATTGCAATAGCTTACATTGTGACCGCGCTATGTGAAATTTGGCTCAAGGGAGATGATGACGTAGATTCTGGATTTGATCTGCTAAAGAGAAACCGTTATCAACTGTTCATTGGCCTGATCGTCATGATCACATACATGGGCTTCTTGTATGGTACCTACGTTCCTGACTGGGAGTATCGGATATCCGTTCCTGGTTCCACAGAGAAATCTTTCTTTGTGAAATGCAGCGTAAGAGGCGACACTGGACCAGGCTGCAATGCTGTTGGCATGATAGACCGCAAAATCTTGGGCATTCAACATCTGTACTGTCGACCGGTTTACGCCCGATCAAAGCAATGCAGTATAAATTCACCACAAAATGGACCACTTCGTCCTGATGCTCCTTCATGGTGCCAGGCCCCTTTTGATCCTGAAGGGCTTCTCAGCTCTGTGATGGCTATCGTCACCTGCTTGATTGGTCTACAATACGGGCATGTAATCGTACATTTCCAGAAACACAAGGAGAGAATCATGAAATGGCTAATCCCCTCCTTCAGCATGCTAATCCTTGCGTTCTCATTGGACTTCTTTGGAATGCATATGAACAAGCCACTGTACACCGTGAGCTACGCCCTCGCCACCGCCGGCGCCGCGGGCCTCCTGTTCGCCGGAATCTACGCGCTGGTCGACATGTACGGCCACCGGCGGCCGACCGCCGTCATGGAGTGGATGGGGACGCACGCGCTCATGATCTACGTCCTGATCGCGTGCAACATCCTGCCCATCTTCATCCACGGCTTCTACTGGAGGGAGCCCAAGAACAACCTTTTGAGGTTAATCGGAGTTGGGGCATGA
Protein Sequence
- >LOC_Os04g33200.1 protein MGGSYELVRTDDAAGHVLDLEAGRCAAVYPKGGGGGGGIAPPPVPSPPSSPASARQRLVSLDVFRGITVLLMILVDDAGAFLPAINHSPWDGVTLADFVMPFFLFIVGVALALAYKRVPNKLEATRKAILRALKLFCVGLVLQGGFFHGVRSLTFGIDMEKIRLMGILQRIAIAYIVTALCEIWLKGDDDVDSGFDLLKRNRYQLFIGLIVMITYMGFLYGTYVPDWEYRISVPGSTEKSFFVKCSVRGDTGPGCNAVGMIDRKILGIQHLYCRPVYARSKQCSINSPQNGPLRPDAPSWCQAPFDPEGLLSSVMAIVTCLIGLQYGHVIVHFQKHKERIMKWLIPSFSMLILAFSLDFFGMHMNKPLYTVSYALATAGAAGLLFAGIYALVDMYGHRRPTAVMEWMGTHALMIYVLIACNILPIFIHGFYWREPKNNLLRLIGVGA*
- >LOC_Os04g33200.2 protein MGGSYELVRTDDAAGHVLDLEAGRCAAVYPKGGGGGGGIAPPPVPSPPSSPASARQRLVSLDVFRGITVLLMILVDDAGAFLPAINHSPWDGVTLADFVMPFFLFIVGVALALAYKRVPNKLEATRKAILRALKLFCVGLVLQGGFFHGVRSLTFGIDMEKIRLMGILQRIAIAYIVTALCEIWLKGDDDVDSGFDLLKRNRYQLFIGLIVMITYMGFLYGTYVPDWEYRISVPGSTEKSFFVKCSVRGDTGPGCNAVGMIDRKILGIQHLYCRPVYARSKQCSINSPQNGPLRPDAPSWCQAPFDPEGLLSSVMAIVTCLIGLQYGHVIVHFQKHKERIMKWLIPSFSMLILAFSLDFFGMHMNKPLYTVSYALATAGAAGLLFAGIYALVDMYGHRRPTAVMEWMGTHALMIYVLIACNILPIFIHGFYWREPKNNLLRLIGVGA*