Gene Details:
- MSU gene ID: LOC_Os04g38310
- RAPdb gene ID: Os04g0455600
- Gene Symbol: HN1L
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Silicon analyses of the 14 orthologous proteins of HN1 and 16 orthologous proteins of HN1L revealed that they share great conservation in vertebrate.
Function-related keywords:
Literature:
- Cloning, expression and subcellular localization of HN1 and HN1L genes, as well as characterization of their orthologs, defining an evolutionarily conserved gene family . DOI: 10.1016/j.gene.2004.02.025 ; PMID: 15094197
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g38310.3 cDNA AGTGGTGGCGCTCGCATTTTTTTTTCAGCTCCGCGGAAGGAACGAAACCCAACCCAAGCGAGGCAAAAGCGGCGGCGGCGGAGGAGGAGAGGAGCAATGGAGAGGGCGGTGCCGGTGAGGAAGCCGCACACCTCGACGGCGGACCTGCTCACGTGGTCGGCGACGGGGCCCGACGCCGCCGCCGCCGCGGCCTCGCCGGTCGCCTCCTCCCGCCCCAGCCTCAAGTGAACGAAAATTTTGCTCGGGCTCAAAGTTAAAAGAAATGACTGGAAGTGGGATATTCGCTGAGAATAGTGAAAATGATGATTCAGAGGCTTCAAATCCTGCAAACAAAACTTCTGTAAGGATGTATCAGCAAACTGTAACTGGAATAAGCCAAATCTCATTCAGTGCTGATGGAAGTGTTTCTCCAAAGAAGCCATCGTCATTACCTGAGGTGGCTAAGCAGCGAGAGCTTAGTGGTACACTGGAGACTGATGCTGAGGCTAAAATGAATAAGCAGCATTCTGAAGCCAAGAGCAAGGAGCTCAGTGGGAGTGATATTTTTGGTCCTCCTCCAGAGATCCCTGCAAGGCCATTGGCTGCTCGCAATATGGAGCTGCAAGGAAATCTAGATTTTGCACTTCCACAACCGAGAAGCGTCCACACATCAGTGAAAGTATCCAATCCTGCTGGAGGTCCAAGCAACATCACGTTCAGTGAGGAGCCTGTAGTCAAGACGTCAAAGAAAATCCATAACCAGAAGTTCCAAGAGTTGACAGGCAACAACATCTTCAAAGAGGACGCTACCCCTGCATCAGCTGAGAAATCTCTGAGCTCAGCAAAGCTGAAGGAGATGAGCGGCAGTGACATCTTTGCTGATGGAGCGGCAGCTCCCCGAGACTATCTCGGCGGTGTCCGCAAGCCCCCTGGTGGCGAGAGCAGCATTGCACTGATCTAATCGCCGCAGGCTGCCCTAATCTGGACTGGCTACTTTTACCCTCATCGCTGAAGTCCGTGGCATGTGCTCTTCCTGGACCCTGGTTCTTGATCATGGTTGAGAGCTGATATCTTGGCCCTGATATCATCTAGAGTCAGCAGAATCTGACTCAGCTTATGTGTTGTAAACTTGACTTAATCTCATCTGTCTTATGGTACTTATGTATTAATCTCCTTGGACTGAGACTGAAATAAGTTTTATTGGTTCATTTTTGTGAGCTCATGGTATCATCAGGAAATAATGTCTGTCTTGTATCAAATTAACTTATTTGTGAGTTATGCAAAAGATAACGAAGGTATCTACAATACCATTTCCTCTTAACCTGGTTTCCTTTGAAATTTGGGAG
- >LOC_Os04g38310.1 cDNA AGTGGTGGCGCTCGCATTTTTTTTTCAGCTCCGCGGAAGGAACGAAACCCAACCCAAGCGAGGCAAAAGCGGCGGCGGCGGAGGAGGAGAGGAGCAATGGAGAGGGCGGTGCCGGTGAGGAAGCCGCACACCTCGACGGCGGACCTGCTCACGTGGTCGGCGACGGGGCCCGACGCCGCCGCCGCCGCGGCCTCGCCGGTCGCCTCCTCCCGCCCCAGCCTCAAGTGAACGAAAATTTTGCTCGGGCTCAAAGTTAAAAGAAATGACTGGAAGTGGGATATTCGCTGAGAATAGTGAAAATGATGATTCAGAGGCTTCAAATCCTGCAAACAAAACTTCTGTAAGGATGTATCAGCAAACTGTAACTGGAATAAGCCAAATCTCATTCAGTGCTGATGGAAGTGTTTCTCCAAAGAAGCCATCGTCATTACCTGAGGTGGCTAAGCAGCGAGAGCTTAGTGGTACACTGGAGACTGATGCTGAGGCTAAAATGAATAAGCAGCATTCTGAAGCCAAGAGCAAGGAGCTCAGTGGGAGTGATATTTTTGGTCCTCCTCCAGAGATCCCTGCAAGGCCATTGGCTGCTCGCAATATGGAGCTGCAAGGAAATCTAGATTTTGCACTTCCACAACCGAGAAGCGTCCACACATCAGTGAAAGTATCCAATCCTGCTGGAGGTCCAAGCAACATCACGTTCAGTGAGGAGCCTGTAGTCAAGACGTCAAAGAAAATCCATAACCAGAAGTTCCAAGAGTTGACAGGCAACAACATCTTCAAAGAGGACGCTACCCCTGCATCAGCTGAGAAATCTCTGAGCTCAGCAAAGCTGAAGGAGATGAGCGGCAGTGACATCTTTGCTGATGGAGCGGCAGCTCCCCGAGACTATCTCGGCGGTGTCCGCAAGCCCCCTGGTGGCGAGAGCAGCATTGCACTGATCTAATCGCCGCAGGCTGCCCTAATCTGGACTGGCTACTTTTACCCTCATCGCTGAAGTCCGTGGCATGTGCTCTTCCTGGACCCTGGTTCTTGATCATGGTTGAGAGCTGATATCTTGGCCCTGATATCATCTAGAGTCAGCAGAATCTGACTCAGCTTATGTGTTGTAAACTTGACTTAATCTCATCTGTCTTATGGTACTTATGTATTAATCTCCTTGGACTGAGACTGAAATAAGTTTTATTGGTTCATTTTTGTGAGCTCATGGTATCATCAGGAAATAATGTCTGTCTTGTATCAAATTAACTTATTTGTGAGTTATGCAAAAGATAACGAAGGTATCTACAATACCATTTCCTCTTAACCTGGTTTCCTTTGAAATTTGGGAG
- >LOC_Os04g38310.2 cDNA AGTGGTGGCGCTCGCATTTTTTTTTCAGCTCCGCGGAAGGAACGAAACCCAACCCAAGCGAGGCAAAAGCGGCGGCGGCGGAGGAGGAGAGGAGCAATGGAGAGGGCGGTGCCGGTGAGGAAGCCGCACACCTCGACGGCGGACCTGCTCACGTGGTCGGCGACGGGGCCCGACGCCGCCGCCGCCGCGGCCTCGCCGGTCGCCTCCTCCCGCCCCAGCCTCAAGTGAACGAAAATTTTGCTCGGGCTCAAAGTTAAAAGAAATGACTGGAAGTGGGATATTCGCTGAGAATAGTGAAAATGATGATTCAGAGGCTTCAAATCCTGCAAACAAAACTTCTGTAAGGATGTATCAGCAAACTGTAACTGGAATAAGCCAAATCTCATTCAGTGCTGATGGAAGTGTTTCTCCAAAGAAGCCATCGTCATTACCTGAGGTGGCTAAGCAGCGAGAGCTTAGTGGTACACTGGAGACTGATGCTGAGGCTAAAATGAATAAGCAGCATTCTGAAGCCAAGAGCAAGGAGCTCAGTGGGAGTGATATTTTTGGTCCTCCTCCAGAGATCCCTGCAAGGCCATTGGCTGCTCGCAATATGGAGCTGCAAGGAAATCTAGATTTTGCACTTCCACAACCGAGAAGCGTCCACACATCAGTGAAAGTATCCAATCCTGCTGGAGGTCCAAGCAACATCACGTTCAGTGAGGAGCCTGTAGTCAAGACGTCAAAGAAAATCCATAACCAGAAGTTCCAAGAGTTGACAGGCAACAACATCTTCAAAGAGGACGCTACCCCTGCATCAGCTGAGAAATCTCTGAGCTCAGCAAAGCTGAAGGAGATGAGCGGCAGTGACATCTTTGCTGATGGAGCGGCAGCTCCCCGAGACTATCTCGGCGGTGTCCGCAAGCCCCCTGGTGGCGAGAGCAGCATTGCACTGATCTAATCGCCGCAGGCTGCCCTAATCTGGACTGGCTACTTTTACCCTCATCGCTGAAGTCCGTGGCATGTGCTCTTCCTGGACCCTGGTTCTTGATCATGGTTGAGAGCTGATATCTTGGCCCTGATATCATCTAGAGTCAGCAGAATCTGACTCAGCTTATGTGTTGTAAACTTGACTTAATCTCATCTGTCTTATGGTACTTATGTATTAATCTCCTTGGACTGAGACTGAAATAAGTTTTATTGGTTCATTTTTGTGAGCTCATGGTATCATCAGGAAATAATGTCTGTCTTGTATCAAATTAACTTATTTGTGAGTTATGCAAAAGATAACGAAGGTATCTACAATACCATTTCCTCTTAACCTGGTTTCCTTTGAAATTTGGGAG
CDS Sequence
- >LOC_Os04g38310.3 CDS ATGACTGGAAGTGGGATATTCGCTGAGAATAGTGAAAATGATGATTCAGAGGCTTCAAATCCTGCAAACAAAACTTCTGTAAGGATGTATCAGCAAACTGTAACTGGAATAAGCCAAATCTCATTCAGTGCTGATGGAAGTGTTTCTCCAAAGAAGCCATCGTCATTACCTGAGGTGGCTAAGCAGCGAGAGCTTAGTGGTACACTGGAGACTGATGCTGAGGCTAAAATGAATAAGCAGCATTCTGAAGCCAAGAGCAAGGAGCTCAGTGGGAGTGATATTTTTGGTCCTCCTCCAGAGATCCCTGCAAGGCCATTGGCTGCTCGCAATATGGAGCTGCAAGGAAATCTAGATTTTGCACTTCCACAACCGAGAAGCGTCCACACATCAGTGAAAGTATCCAATCCTGCTGGAGGTCCAAGCAACATCACGTTCAGTGAGGAGCCTGTAGTCAAGACGTCAAAGAAAATCCATAACCAGAAGTTCCAAGAGTTGACAGGCAACAACATCTTCAAAGAGGACGCTACCCCTGCATCAGCTGAGAAATCTCTGAGCTCAGCAAAGCTGAAGGAGATGAGCGGCAGTGACATCTTTGCTGATGGAGCGGCAGCTCCCCGAGACTATCTCGGCGGTGTCCGCAAGCCCCCTGGTGGCGAGAGCAGCATTGCACTGATCTAA
- >LOC_Os04g38310.1 CDS ATGACTGGAAGTGGGATATTCGCTGAGAATAGTGAAAATGATGATTCAGAGGCTTCAAATCCTGCAAACAAAACTTCTGTAAGGATGTATCAGCAAACTGTAACTGGAATAAGCCAAATCTCATTCAGTGCTGATGGAAGTGTTTCTCCAAAGAAGCCATCGTCATTACCTGAGGTGGCTAAGCAGCGAGAGCTTAGTGGTACACTGGAGACTGATGCTGAGGCTAAAATGAATAAGCAGCATTCTGAAGCCAAGAGCAAGGAGCTCAGTGGGAGTGATATTTTTGGTCCTCCTCCAGAGATCCCTGCAAGGCCATTGGCTGCTCGCAATATGGAGCTGCAAGGAAATCTAGATTTTGCACTTCCACAACCGAGAAGCGTCCACACATCAGTGAAAGTATCCAATCCTGCTGGAGGTCCAAGCAACATCACGTTCAGTGAGGAGCCTGTAGTCAAGACGTCAAAGAAAATCCATAACCAGAAGTTCCAAGAGTTGACAGGCAACAACATCTTCAAAGAGGACGCTACCCCTGCATCAGCTGAGAAATCTCTGAGCTCAGCAAAGCTGAAGGAGATGAGCGGCAGTGACATCTTTGCTGATGGAGCGGCAGCTCCCCGAGACTATCTCGGCGGTGTCCGCAAGCCCCCTGGTGGCGAGAGCAGCATTGCACTGATCTAA
- >LOC_Os04g38310.2 CDS ATGACTGGAAGTGGGATATTCGCTGAGAATAGTGAAAATGATGATTCAGAGGCTTCAAATCCTGCAAACAAAACTTCTGTAAGGATGTATCAGCAAACTGTAACTGGAATAAGCCAAATCTCATTCAGTGCTGATGGAAGTGTTTCTCCAAAGAAGCCATCGTCATTACCTGAGGTGGCTAAGCAGCGAGAGCTTAGTGGTACACTGGAGACTGATGCTGAGGCTAAAATGAATAAGCAGCATTCTGAAGCCAAGAGCAAGGAGCTCAGTGGGAGTGATATTTTTGGTCCTCCTCCAGAGATCCCTGCAAGGCCATTGGCTGCTCGCAATATGGAGCTGCAAGGAAATCTAGATTTTGCACTTCCACAACCGAGAAGCGTCCACACATCAGTGAAAGTATCCAATCCTGCTGGAGGTCCAAGCAACATCACGTTCAGTGAGGAGCCTGTAGTCAAGACGTCAAAGAAAATCCATAACCAGAAGTTCCAAGAGTTGACAGGCAACAACATCTTCAAAGAGGACGCTACCCCTGCATCAGCTGAGAAATCTCTGAGCTCAGCAAAGCTGAAGGAGATGAGCGGCAGTGACATCTTTGCTGATGGAGCGGCAGCTCCCCGAGACTATCTCGGCGGTGTCCGCAAGCCCCCTGGTGGCGAGAGCAGCATTGCACTGATCTAA
Protein Sequence
- >LOC_Os04g38310.3 protein MTGSGIFAENSENDDSEASNPANKTSVRMYQQTVTGISQISFSADGSVSPKKPSSLPEVAKQRELSGTLETDAEAKMNKQHSEAKSKELSGSDIFGPPPEIPARPLAARNMELQGNLDFALPQPRSVHTSVKVSNPAGGPSNITFSEEPVVKTSKKIHNQKFQELTGNNIFKEDATPASAEKSLSSAKLKEMSGSDIFADGAAAPRDYLGGVRKPPGGESSIALI*
- >LOC_Os04g38310.1 protein MTGSGIFAENSENDDSEASNPANKTSVRMYQQTVTGISQISFSADGSVSPKKPSSLPEVAKQRELSGTLETDAEAKMNKQHSEAKSKELSGSDIFGPPPEIPARPLAARNMELQGNLDFALPQPRSVHTSVKVSNPAGGPSNITFSEEPVVKTSKKIHNQKFQELTGNNIFKEDATPASAEKSLSSAKLKEMSGSDIFADGAAAPRDYLGGVRKPPGGESSIALI*
- >LOC_Os04g38310.2 protein MTGSGIFAENSENDDSEASNPANKTSVRMYQQTVTGISQISFSADGSVSPKKPSSLPEVAKQRELSGTLETDAEAKMNKQHSEAKSKELSGSDIFGPPPEIPARPLAARNMELQGNLDFALPQPRSVHTSVKVSNPAGGPSNITFSEEPVVKTSKKIHNQKFQELTGNNIFKEDATPASAEKSLSSAKLKEMSGSDIFADGAAAPRDYLGGVRKPPGGESSIALI*