Gene Details:
- MSU gene ID: LOC_Os04g47059
- RAPdb gene ID: Os04g0557500
- Gene Symbol: Kala4 OsS1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Here, we show that the black grain trait originated from ectopic expression of the Kala4 bHLH gene due to rearrangement in the promoter region.
Function-related keywords:
Literature:
- The Birth of a Black Rice Gene and Its Local Spread by Introgression . DOI: 10.1105/tpc.15.00310 ; PMID: 26362607
- The C-S-A gene system regulates hull pigmentation and reveals evolution of anthocyanin biosynthesis pathway in rice . DOI: 10.1093/jxb/ery001 ; PMID: 29361187
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g47059.1 cDNA GAGCCTTGTGGACAGAGAAATTAAACAGTTAAGTTCTAGATTTCTATCGTGGTGATGGCATCTGCTCCTCCAGTTCAGGAAGAAGCCCTACAGCCAGGGACGAACCACTTCAGGAGCCGGCTTGCTGCTGCTGTGAGGAGCATCAGTTGGAGTTACACCATCTTTTGGTCCACTTCAACCAGTCTCCCGGGAGTTCTGACTTGGAACGATGGATTCTACAACGGCGAGGTAAAGACGAGGAAGATATCCAACTTAGAGGACCTCACCGCTGACCAGCTCGTCCTGCGGAGAAGCGAGCAACTGAGCGAGCTCTACTACTCTCTCCTGTCCGGCGAGTGCGACCACCGGGCAAGGAAGCCCGTCGCCGCACTGTCGCCGGAAGATATCGCGGACACAGAATGGTACTACGTTGTCTGCATGACCTACGCCTTTCGACCCGGCCAAGGGTTACCCGGCAGAAGCTATGCAAGCAATCGATCTGTTTGGTTGTGCAATGCTCAGTCTGCAGATAGCAAAACCCTTTCTACGTGCGCTCTTAGCGAAGAGCGCGTCTATTCAGACAATTGTCTGCATCCCCTTCATGAGTGGCGTGCTTGAGCTGGGAACCACTGATCCGGTTTCGGAGGACCCAAACTTGGTAAACCGAATCGTTGCATATTTGAAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACCGAGTTCTACTCCTTCTCCAGACGAAACAGAAGATGCCGACACCGTGTTCGATGGCCTCATTGAAGAGGACCAGATGGTCATACTCCAGGGAGAAGACGAGCTAGGCGACGTCGTCGTCGCTGAGTGCGAGACCAACGGCGCCAACCCCGAAACGATCACCATGGAGACCGACGAGTTCTACAGCCTCTGCGAGGAGCTGGACCTGGACCTCGGTTCTTATCAGCTAGTCCCGACGTCGGCACGGGAGACGGTGGCTGCGGCGGCGGCGGCGGCTAACGATGTCGACGGCGTTGCATACTCTCACGCCTCGTGTTTCGTGTCATGGAAAAGAGCGAACCCGGCGGAGAAGGTGGTGGCCGTGCCGATGACTGCAGGCATAGAGTCACAGAAGTTGCTGAAGAAAGCTGTAGGCGGCGGCACCGCATGGATGAGTAATATTGATGATCGTGGTAGCGTGGCAATAACGACGACTCCAGGAAGTAACATCAAGAGCCATGTCATGTCAGAGAGAAGGCGCCGAGAGAAGCTCAACGAGATGTTCCTCATTCTGAAGTCACTACTCCCCTCCGTCCGCAAGGTTGACAAGGCATCCATACTTGCAGAAACGATAACCTACCTCAAAGTGTTAGAGAAAAGAGTGAAAGAGCTGGAGTCCAGCAGCAGGGAGCCATCGCGTTGGCGGCCAACCGAAATTGGACAGGGGAAGGCGCCGTAAGATCACCGGGAAGGAGGTCTATGAGATCGGTGTCAGTGGTGGTACCTCGTCGGTACCTCGTCAACACCGTACGTATATGATATGCATGTATAAGATCACCGGGCAGGAGGTCTCTGAGATGGATGTCATACGGTGTTGACGAGGTACCGTACGTATGATATATAGTTATCGTTTTCATTATGGAAAAAAAATTCCGAATTACCTCGTGTACTATAAAAGACGCGAATATTAGGGAAGAATCTAATATCAAATAATTAGAAGGGGTGAGGTTTCGAATCCAGGTCGTCTATCACACCACCTTGTGAAGCTAGCCGGAAAACCCTTAAGCGTTTCTCTACCTCCATGTACTATTGGTGCCATCTGAATTACCGCTTACTAAT
CDS Sequence
- >LOC_Os04g47059.1 CDS ATGCAAGCAATCGATCTGTTTGGTTGTGCAATGCTCAGTCTGCAGATAGCAAAACCCTTTCTACGTGCGCTCTTAGCGAAGAGCGCGTCTATTCAGACAATTGTCTGCATCCCCTTCATGAGTGGCGTGCTTGAGCTGGGAACCACTGATCCGGTTTCGGAGGACCCAAACTTGGTAAACCGAATCGTTGCATATTTGAAGGAGCTTCAGTTTCCGATATGCTTAGAGGTACCGAGTTCTACTCCTTCTCCAGACGAAACAGAAGATGCCGACACCGTGTTCGATGGCCTCATTGAAGAGGACCAGATGGTCATACTCCAGGGAGAAGACGAGCTAGGCGACGTCGTCGTCGCTGAGTGCGAGACCAACGGCGCCAACCCCGAAACGATCACCATGGAGACCGACGAGTTCTACAGCCTCTGCGAGGAGCTGGACCTGGACCTCGGTTCTTATCAGCTAGTCCCGACGTCGGCACGGGAGACGGTGGCTGCGGCGGCGGCGGCGGCTAACGATGTCGACGGCGTTGCATACTCTCACGCCTCGTGTTTCGTGTCATGGAAAAGAGCGAACCCGGCGGAGAAGGTGGTGGCCGTGCCGATGACTGCAGGCATAGAGTCACAGAAGTTGCTGAAGAAAGCTGTAGGCGGCGGCACCGCATGGATGAGTAATATTGATGATCGTGGTAGCGTGGCAATAACGACGACTCCAGGAAGTAACATCAAGAGCCATGTCATGTCAGAGAGAAGGCGCCGAGAGAAGCTCAACGAGATGTTCCTCATTCTGAAGTCACTACTCCCCTCCGTCCGCAAGGTTGACAAGGCATCCATACTTGCAGAAACGATAACCTACCTCAAAGTGTTAGAGAAAAGAGTGAAAGAGCTGGAGTCCAGCAGCAGGGAGCCATCGCGTTGGCGGCCAACCGAAATTGGACAGGGGAAGGCGCCGTAA
Protein Sequence
- >LOC_Os04g47059.1 protein MQAIDLFGCAMLSLQIAKPFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPNLVNRIVAYLKELQFPICLEVPSSTPSPDETEDADTVFDGLIEEDQMVILQGEDELGDVVVAECETNGANPETITMETDEFYSLCEELDLDLGSYQLVPTSARETVAAAAAAANDVDGVAYSHASCFVSWKRANPAEKVVAVPMTAGIESQKLLKKAVGGGTAWMSNIDDRGSVAITTTPGSNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESSSREPSRWRPTEIGQGKAP*