Gene Details:
- MSU gene ID: LOC_Os04g47990
- RAPdb gene ID: Os04g0567800
- Gene Symbol: OsDOF17
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsDOF17 is a transcriptional activator that binds to the AAAAG cis-element in the WCR1A promoter.
Function-related keywords:
Literature:
- Natural variation in WHITE-CORE RATE 1 regulates redox homeostasis in rice endosperm to affect grain quality . DOI: 10.1093/plcell/koac057 ; PMID: 35171272
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g47990.2 cDNA GCGAGCTTGTTGCTGTAGTAGTAGTTGGTGTGAAGTTAGCAAGGTGTTTGTTTGATCTTTGATCGTTTGTGTTCTAATGGAGTGCTGCACCATGTGTGTACCATCAGGGGCTAGGGCTGGTGAAGCCCATGGAGGAGATGCTGATGGCAGCGAACGCGGCCGCCGGCGCGAATCCGAATCCGGCGGCGACGGCGCCGTCGTCGGTGACTGGGGGCGCACTGAGGGGCGGCGGCGGCGGCGGCGCGCCGCCGGTGGCAGGTGGCGCGGGGGCGGGTAGCACGGAGCGGCGGGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGGCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCGCGCAAGAACAAGCGCTCGTCGTCGTCGGCGGCATCGGCGTCGCCCGCGTCCGCCTCCACGGCGAATTCCGTCGTCACGAGCGCGTCCATGTCCATGTCCATGGCCAGCACGGGCGGCGGGGCGTCCAAGAACCCGAAGCTGGTCCACGAGGGCGCGCAGGACTTGAACCTGGCGTTCCCGCACCACGGCGGGCTGCAGGCGCCGGGGGAGTTCCCGGCGTTCCCGAGCCTGGAGAGCAGCAGCGTGTGCAACCCCGGTGGCCCAATGGGGACCAACGGCCGGGGCGGCGGCGCGCTCTCCGCGATGGAGCTGCTCCGAAGCACCGGCTGCTACATGCCGCTGCAGGTGCCGATGCAGATGCCAGCGGAGTACGCCACGCCGGGGTTCGCGCTCGGTGAGTTCCGCGCGCCGCCGCCGCCGCCACAGTCGTCCCAGAGCTTGCTCGGGTTCTCGTTGGACGCGCACGGCTCGGTGGGCGGGCCATCCGCCGCGGGGTTCGGCTCCAGCGCGGGGTTGCAAGGCGTGCCGGAGAGCACGGGCAGGTTGCTGTTCCCGTTCGAGGACTTGAAGCCGACGGTCAGCTCTGGCACTGGCGGTGGAGGCGCAAGCGGCGGCGGCGCCGGCGTAGACGGCGGCCATCAGTTTGATCACGGCAAGGAGCAGCAGGCCGGTGGCGGAGGCGGCGGCCCAGGCGGGCACGACACGCCGGGGTTCTGGAACGGCATGATCGGCGGCGGCAGTGGCACTTCTTGGTAATGCGGCGGCGGCGGCCATGCATGCATGCATGGCTCATGCAAAAGCCTCCGCGCTGTGGTGGCGTGGGTTCAAATTGGAGATAGGCAGTAGAGACGACGAGGGTTTTAATAAGAGGTTGGCATTGGCGATAATCCATCACTGATTCACTGTTACTCCGTATAAGGTGTTTTGATCTCTCTTCTTCTTCTTTCCCGGTGTTGCATCATCATCTTGGTGTTCTTTCTTCTCCCTTTTGCTGTCTTTCATGTGATTGTTGATCGGCTTTGGTGCTCAACACAACAACCGAGCTCACATGATTCCTCAAAAGGATCATGATGCATGATCGATCTCTTTCTGAATTCTGATCTTCCAGTTCTCTCCATTGATCACTGTTACTACTAGTCATCGCTTGATCGATGTGTGGTTAGAGAGCTGCATGCGTCAGTGCAGTACTAGACTAGTAGAGCATGGGAAGCTTCTTTTTAGGCTGGCTTCGAGTCCGATGGCGTGTACGTACGTGGTACACAGGCATGCATGTGGTGTGTAGCTCATTGGTTTTGCAGGGGCATTGTGAAGCGAAGGATGAAGGGAAGGACTCGGTTGGGGAGGAAGAAAGAAAAATGGACCCCCATCACCATGCATGTATGTCAAACTTAGCTACAGTATGTTTGGTAACGGCAATGCATCAAGCTTTTGGTTGTAGATGTAGATCTTGGGAAGGGTTTGCAGCTGATCTATGACTTTGTGTTGATCCAAACAGTAGTGATTCCATCCTTTTCTAGCTTAACTTGTTATTGTTGTTAACTTCTATGGGATGTGTAGAGGTCATATAAAGTTATAGTAGTAGTAGTTGCAAAAGGGGTTTTTGAGCGCATGTAATTTAATTTGTATAGTACTCCTACTATCTTATTGTTATATTTACAGCCAAACTATAATGCACATCTTTTTGCTCCTTGTTTCTGTACTTTTTATATAA
- >LOC_Os04g47990.1 cDNA GCGAGCTTGTTGCTGTAGTAGTAGTTGGTGTGAAGTTAGCAAGGTGTTTGTTTGATCTTTGATCGTTTGTGTTCTAATGGAGTGCTGCACCATGTGTGTACCATCAGGGGCTAGGGCTGGTGAAGCCCATGGAGGAGATGCTGATGGCAGCGAACGCGGCCGCCGGCGCGAATCCGAATCCGGCGGCGACGGCGCCGTCGTCGGTGACTGGGGGCGCACTGAGGGGCGGCGGCGGCGGCGGCGCGCCGCCGGTGGCAGGTGGCGCGGGGGCGGGTAGCACGGAGCGGCGGGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGGCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCGCGCAAGAACAAGCGCTCGTCGTCGTCGGCGGCATCGGCGTCGCCCGCGTCCGCCTCCACGGCGAATTCCGTCGTCACGAGCGCGTCCATGTCCATGTCCATGGCCAGCACGGGCGGCGGGGCGTCCAAGAACCCGAAGCTGGTCCACGAGGGCGCGCAGGACTTGAACCTGGCGTTCCCGCACCACGGCGGGCTGCAGGCGCCGGGGGAGTTCCCGGCGTTCCCGAGCCTGGAGAGCAGCAGCGTGTGCAACCCCGGTGGCCCAATGGGGACCAACGGCCGGGGCGGCGGCGCGCTCTCCGCGATGGAGCTGCTCCGAAGCACCGGCTGCTACATGCCGCTGCAGGTGCCGATGCAGATGCCAGCGGAGTACGCCACGCCGGGGTTCGCGCTCGGTGAGTTCCGCGCGCCGCCGCCGCCGCCACAGTCGTCCCAGAGCTTGCTCGGGTTCTCGTTGGACGCGCACGGCTCGGTGGGCGGGCCATCCGCCGCGGGGTTCGGCTCCAGCGCGGGGTTGCAAGGCGTGCCGGAGAGCACGGGCAGGTTGCTGTTCCCGTTCGAGGACTTGAAGCCGACGGTCAGCTCTGGCACTGGCGGTGGAGGCGCAAGCGGCGGCGGCGCCGGCGTAGACGGCGGCCATCAGTTTGATCACGGCAAGGAGCAGCAGGCCGGTGGCGGAGGCGGCGGCCCAGGCGGGCACGACACGCCGGGGTTCTGGAACGGCATGATCGGCGGCGGCAGTGGCACTTCTTGGTAATGCGGCGGCGGCGGCCATGCATGCATGCATGGCTCATGCAAAAGCCTCCGCGCTGTGGTGGCGTGGGTTCAAATTGGAGATAGGCAGTAGAGACGACGAGGGTTTTAATAAGAGGTTGGCATTGGCGATAATCCATCACTGATTCACTGTTACTCCGTATAAGGTGTTTTGATCTCTCTTCTTCTTCTTTCCCGGTGTTGCATCATCATCTTGGTGTTCTTTCTTCTCCCTTTTGCTGTCTTTCATGTGATTGTTGATCGGCTTTGGTGCTCAACACAACAACCGAGCTCACATGATTCCTCAAAAGGATCATGATGCATGATCGATCTCTTTCTGAATTCTGATCTTCCAGTTCTCTCCATTGATCACTGTTACTACTAGTCATCGCTTGATCGATGTGTGGTTAGAGAGCTGCATGCGTCAGTGCAGTACTAGACTAGTAGAGCATGGGAAGCTTCTTTTTAGGCTGGCTTCGAGTCCGATGGCGTGTACGTACGTGGTACACAGGCATGCATGTGGTGTGTAGCTCATTGGTTTTGCAGGGGCATTGTGAAGCGAAGGATGAAGGGAAGGACTCGGTTGGGGAGGAAGAAAGAAAAATGGACCCCCATCACCATGCATGTATGTCAAACTTAGCTACAGTATGTTTGGTAACGGCAATGCATCAAGCTTTTGGTTGTAGATGTAGATCTTGGGAAGGGTTTGCAGCTGATCTATGACTTTGTGTTGATCCAAACAGTAGTGATTCCATCCTTTTCTAGCTTAACTTGTTATTGTTGTTAACTTCTATGGGATGTGTAGAGGTCATATAAAGTTATAGTAGTAGTAGTTGCAAAAGGGGTTTTTGAGCGCATGTAATTTAATTTGTATAGTACTCCTACTATCTTATTGTTATATTTACAGCCAAACTATAATGCACATCTTTTTGCTCCTTGTTTCTGTACTTTTTATATAA
CDS Sequence
- >LOC_Os04g47990.2 CDS ATGGAGGAGATGCTGATGGCAGCGAACGCGGCCGCCGGCGCGAATCCGAATCCGGCGGCGACGGCGCCGTCGTCGGTGACTGGGGGCGCACTGAGGGGCGGCGGCGGCGGCGGCGCGCCGCCGGTGGCAGGTGGCGCGGGGGCGGGTAGCACGGAGCGGCGGGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGGCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCGCGCAAGAACAAGCGCTCGTCGTCGTCGGCGGCATCGGCGTCGCCCGCGTCCGCCTCCACGGCGAATTCCGTCGTCACGAGCGCGTCCATGTCCATGTCCATGGCCAGCACGGGCGGCGGGGCGTCCAAGAACCCGAAGCTGGTCCACGAGGGCGCGCAGGACTTGAACCTGGCGTTCCCGCACCACGGCGGGCTGCAGGCGCCGGGGGAGTTCCCGGCGTTCCCGAGCCTGGAGAGCAGCAGCGTGTGCAACCCCGGTGGCCCAATGGGGACCAACGGCCGGGGCGGCGGCGCGCTCTCCGCGATGGAGCTGCTCCGAAGCACCGGCTGCTACATGCCGCTGCAGGTGCCGATGCAGATGCCAGCGGAGTACGCCACGCCGGGGTTCGCGCTCGGTGAGTTCCGCGCGCCGCCGCCGCCGCCACAGTCGTCCCAGAGCTTGCTCGGGTTCTCGTTGGACGCGCACGGCTCGGTGGGCGGGCCATCCGCCGCGGGGTTCGGCTCCAGCGCGGGGTTGCAAGGCGTGCCGGAGAGCACGGGCAGGTTGCTGTTCCCGTTCGAGGACTTGAAGCCGACGGTCAGCTCTGGCACTGGCGGTGGAGGCGCAAGCGGCGGCGGCGCCGGCGTAGACGGCGGCCATCAGTTTGATCACGGCAAGGAGCAGCAGGCCGGTGGCGGAGGCGGCGGCCCAGGCGGGCACGACACGCCGGGGTTCTGGAACGGCATGATCGGCGGCGGCAGTGGCACTTCTTGGTAA
- >LOC_Os04g47990.1 CDS ATGGAGGAGATGCTGATGGCAGCGAACGCGGCCGCCGGCGCGAATCCGAATCCGGCGGCGACGGCGCCGTCGTCGGTGACTGGGGGCGCACTGAGGGGCGGCGGCGGCGGCGGCGCGCCGCCGGTGGCAGGTGGCGCGGGGGCGGGTAGCACGGAGCGGCGGGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGGCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCGCGCAAGAACAAGCGCTCGTCGTCGTCGGCGGCATCGGCGTCGCCCGCGTCCGCCTCCACGGCGAATTCCGTCGTCACGAGCGCGTCCATGTCCATGTCCATGGCCAGCACGGGCGGCGGGGCGTCCAAGAACCCGAAGCTGGTCCACGAGGGCGCGCAGGACTTGAACCTGGCGTTCCCGCACCACGGCGGGCTGCAGGCGCCGGGGGAGTTCCCGGCGTTCCCGAGCCTGGAGAGCAGCAGCGTGTGCAACCCCGGTGGCCCAATGGGGACCAACGGCCGGGGCGGCGGCGCGCTCTCCGCGATGGAGCTGCTCCGAAGCACCGGCTGCTACATGCCGCTGCAGGTGCCGATGCAGATGCCAGCGGAGTACGCCACGCCGGGGTTCGCGCTCGGTGAGTTCCGCGCGCCGCCGCCGCCGCCACAGTCGTCCCAGAGCTTGCTCGGGTTCTCGTTGGACGCGCACGGCTCGGTGGGCGGGCCATCCGCCGCGGGGTTCGGCTCCAGCGCGGGGTTGCAAGGCGTGCCGGAGAGCACGGGCAGGTTGCTGTTCCCGTTCGAGGACTTGAAGCCGACGGTCAGCTCTGGCACTGGCGGTGGAGGCGCAAGCGGCGGCGGCGCCGGCGTAGACGGCGGCCATCAGTTTGATCACGGCAAGGAGCAGCAGGCCGGTGGCGGAGGCGGCGGCCCAGGCGGGCACGACACGCCGGGGTTCTGGAACGGCATGATCGGCGGCGGCAGTGGCACTTCTTGGTAA
Protein Sequence
- >LOC_Os04g47990.2 protein MEEMLMAANAAAGANPNPAATAPSSVTGGALRGGGGGGAPPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNPKLVHEGAQDLNLAFPHHGGLQAPGEFPAFPSLESSSVCNPGGPMGTNGRGGGALSAMELLRSTGCYMPLQVPMQMPAEYATPGFALGEFRAPPPPPQSSQSLLGFSLDAHGSVGGPSAAGFGSSAGLQGVPESTGRLLFPFEDLKPTVSSGTGGGGASGGGAGVDGGHQFDHGKEQQAGGGGGGPGGHDTPGFWNGMIGGGSGTSW*
- >LOC_Os04g47990.1 protein MEEMLMAANAAAGANPNPAATAPSSVTGGALRGGGGGGAPPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMSMASTGGGASKNPKLVHEGAQDLNLAFPHHGGLQAPGEFPAFPSLESSSVCNPGGPMGTNGRGGGALSAMELLRSTGCYMPLQVPMQMPAEYATPGFALGEFRAPPPPPQSSQSLLGFSLDAHGSVGGPSAAGFGSSAGLQGVPESTGRLLFPFEDLKPTVSSGTGGGGASGGGAGVDGGHQFDHGKEQQAGGGGGGPGGHDTPGFWNGMIGGGSGTSW*