Gene Details:
- MSU gene ID: LOC_Os04g52920
- RAPdb gene ID: Os04g0620200
- Gene Symbol: GSD1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Grain setting defect 1, encoding a remorin protein, affects the grain setting in rice through regulating plasmodesmatal conductance.
- Together, our results suggest that GSD1 may play a role in regulating photoassimilate translocation through the symplastic pathway to impact grain setting in rice.
- GSD1 was found to be specifically expressed in the plasma membrane and plasmodesmata (PD) of phloem companion cells.
- Experimental evidence suggests the phenotype of the GSD1-D mutant is caused by defects in the grain filling process as a result of the impaired transport of carbohydrates from the photosynthetic site to the phloem.
Function-related keywords:
Literature:
- Grain setting defect1, encoding a remorin protein, affects the grain setting in rice through regulating plasmodesmatal conductance . DOI: 10.1104/pp.114.246769 ; PMID: 25253885
- Grain setting defect1 (GSD1) function in rice depends on S-acylation and interacts with actin 1 (OsACT1) at its C-terminal . DOI: 10.3389/fpls.2015.00804 ; PMID: 26483819
Related News:
Gene Resources:
- NCBI ID: NM_001060440
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g52920.1 cDNA CTAGTGTTCAGTGTTCTCTTCTCCCCCTCACTCTCTCCTGTCTCGCTCCCCCCTCCTTCCCCAGTCCCTCCATCTCACTCTCACCCACCAGAGTACCAGAGAAGCACAGAGACTCAGAGAGGGAGAGAGAGAGGAAGAATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGATTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATAGAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAAATGACACGGCGTTTAGCTGAAGAGAAACGAGCCTCAGCCAATGCAAGGATGAACCAACAAGCAGCAAAGGCGGTTCACAAGGCTGAGCTGATTCGCCAGACAGGACGAGTTCCAGGGTCATGTATCCTATGCTGCAGTGGTTGCTTCTGTCAACACTAGTGTATGCTTGACAATTAGGGAGTTAAATATGGTCGTGAAAAATCTAAACCCCATGTTCTATAATCAGCATTCCTTGGTTTTAGTATGGAAAGGAATGTCTGATACTTTGATTAGGTATTCAGATGTACAAATTCTTGCTTGTCATAAAAGTCAATCCAATGCTTACATTTGCTTGGTCGGCTACTCGGTTAAAGAACACTTGGTTGTTGCTCAACGAATTGAATCATTGGAAAATGACGAGCATTTCTTGACT
- >LOC_Os04g52920.2 cDNA CTAGTGTTCAGTGTTCTCTTCTCCCCCTCACTCTCTCCTGTCTCGCTCCCCCCTCCTTCCCCAGTCCCTCCATCTCACTCTCACCCACCAGAGTACCAGAGAAGCACAGAGACTCAGAGAGGGAGAGAGAGAGGAAGAATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGATTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATAGAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAAATGACACGGCGTTTAGCTGAAGAGAAACGAGCCTCAGCCAATGCAAGGATGAACCAACAAGCAGCAAAGGCGGTTCACAAGGCTGAGCTGATTCGCCAGACAGGACGAGTTCCAGGGTCATGTATCCTATGCTGCAGTGGTTGCTTCTGTCAACACTAGTGTATGCTTGACAATTAGGGAGTTAAATATGGTCGTGAAAAATCTAAACCCCATGTTCTATAATCAGCATTCCTTGGTTTTAGTATGGAAAGGAATGTCTGATACTTTGATTAGGTATTCAGATGTACAAATTCTTGCTTGTCATAAAAGTCAATCCAATGCTTACATTTGCTTGGTCGGCTACTCGGTTAAAGAACACTTGGTTGTTGCTCAACGAATTGAATCATTGGAAAATGACGAGCATTTCTTGACT
CDS Sequence
- >LOC_Os04g52920.1 CDS ATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGATTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATAGAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAAATGACACGGCGTTTAGCTGAAGAGAAACGAGCCTCAGCCAATGCAAGGATGAACCAACAAGCAGCAAAGGCGGTTCACAAGGCTGAGCTGATTCGCCAGACAGGACGAGTTCCAGGGTCATGTATCCTATGCTGCAGTGGTTGCTTCTGTCAACACTAG
- >LOC_Os04g52920.2 CDS ATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTTCTTGAAGAAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCCTACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGATTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATAGAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAAATGACACGGCGTTTAGCTGAAGAGAAACGAGCCTCAGCCAATGCAAGGATGAACCAACAAGCAGCAAAGGCGGTTCACAAGGCTGAGCTGATTCGCCAGACAGGACGAGTTCCAGGGTCATGTATCCTATGCTGCAGTGGTTGCTTCTGTCAACACTAG
Protein Sequence
- >LOC_Os04g52920.1 protein MEYERIHKVQAGALSPTKLRMKLLGTHNRVRVISNSSSRTSPSKNTEPSQAQNRLLVCDVLEEAVSGSSDGSKCSSAINKTEALEKDPPLDINKVEDMTKSSVQQPASSNSSMIHPVRTIEEESNDCDSGIDNASTSSFEFHGGEKTAAQNPTSGYFSRQTSSKWNDAEKWIVNKQNVQQNISKGAPQNQSAQQMNSAAGRGFIVPKISNRNIIPRPMQNMKRPSPASSASRSILERLSFGSHQPKLVRHADVCTVNNAGVTSEYQTKATDNSSSIEIRPYKDPKAIPAVHSVSVRDVGTEMTPIPSQDPSRTGTPLGSMTPTRSPNCSIPSTPVGGRSTASPGDDNTDDGPYFNRKGGTNEISDDEMRLKTRKEIAALGIQLGKMNIATWASKEELELVSASPSIADLERMKKEYAARAAAYEEAENFKHTARFKKEELKIEAWESLQKAKIESEMKRIEEHAEKLRSEAMAKMAEKLEMTRRLAEEKRASANARMNQQAAKAVHKAELIRQTGRVPGSCILCCSGCFCQH*
- >LOC_Os04g52920.2 protein MEYERIHKVQAGALSPTKLRMKLLGTHNRVRVISNSSSRTSPSKNTEPSQAQNRLLVCDVLEEAVSGSSDGSKCSSAINKTEALEKDPPLDINKVEDMTKSSVQQPASSNSSMIHPVRTIEEESNDCDSGIDNASTSSFEFHGGEKTAAQNPTSGYFSRQTSSKWNDAEKWIVNKQNVQQNISKGAPQNQSAQQMNSAAGRGFIVPKISNRNIIPRPMQNMKRPSPASSASRSILERLSFGSHQPKLVRHADVCTVNNAGVTSEYQTKATDNSSSIEIRPYKDPKAIPAVHSVSVRDVGTEMTPIPSQDPSRTGTPLGSMTPTRSPNCSIPSTPVGGRSTASPGDDNTDDGPYFNRKGGTNEISDDEMRLKTRKEIAALGIQLGKMNIATWASKEELELVSASPSIADLERMKKEYAARAAAYEEAENFKHTARFKKEELKIEAWESLQKAKIESEMKRIEEHAEKLRSEAMAKMAEKLEMTRRLAEEKRASANARMNQQAAKAVHKAELIRQTGRVPGSCILCCSGCFCQH*