Gene Details:
- MSU gene ID: LOC_Os04g53620
- RAPdb gene ID: Os04g0628100
- Gene Symbol: RUBI3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Expression enhancement of a rice polyubiquitin gene promoter . DOI: 10.1007/s11103-005-3853-z ; PMID: 16429261
Related News:
Gene Resources:
- NCBI ID: AY954394
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g53620.2 cDNA TCGCATAGCGAGTCGAATCGACCGAAGGGGAGGGGGAGCGAAGCTTTGCGTTCTCTAATCGCCTCGTCAAGATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTTCTCCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGGCATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCCGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAACATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGGTCTCTGAGCGTGTGCTGTGGTGCAGCATTGGACTTCATTATACCTATGCCGCTCGTCTGTCATATCATCGTGTCATGGTTGTGTTGTGTTCTGGTTTAGAGTCCCTAAGTTGTGTTGATACTATTATCCATACTAGTACAATTTGCTTCACTGTGCATCGGTACCAATCGATGATATTATCATTCTACTTCTGTTAATGTTTCTGAGATGTTTGATCCGAGATGAGATTCTGTTTGTGCATTGCTCACATGGTCGTAACCGGCCACTGTTGCGCGTGCCTGTTGATCAATCTGTTTGCGCTTGACGGTTTCTGATGCTTGGAATTGGGGTGTCGATGTTGGTTTGGTTATCTATCCTGGTATGTTTGTTGATTTCATGCGCATTTCAGTCTTTACGGCTTCTGATGCTTGGAATTCTAA
- >LOC_Os04g53620.4 cDNA TCGCATAGCGAGTCGAATCGACCGAAGGGGAGGGGGAGCGAAGCTTTGCGTTCTCTAATCGCCTCGTCAAGATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTTCTCCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGGCATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCCGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAACATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGGTCTCTGAGCGTGTGCTGTGGTGCAGCATTGGACTTCATTATACCTATGCCGCTCGTCTGTCATATCATCGTGTCATGGTTGTGTTGTGTTCTGGTTTAGAGTCCCTAAGTTGTGTTGATACTATTATCCATACTAGTACAATTTGCTTCACTGTGCATCGGTACCAATCGATGATATTATCATTCTACTTCTGTTAATGTTTCTGAGATGTTTGATCCGAGATGAGATTCTGTTTGTGCATTGCTCACATGGTCGTAACCGGCCACTGTTGCGCGTGCCTGTTGATCAATCTGTTTGCGCTTGACGGTTTCTGATGCTTGGAATTGGGGTGTCGATGTTGGTTTGGTTATCTATCCTGGTATGTTTGTTGATTTCATGCGCATTTCAGTCTTTACGGCTTCTGATGCTTGGAATTCTAA
- >LOC_Os04g53620.1 cDNA TCGCATAGCGAGTCGAATCGACCGAAGGGGAGGGGGAGCGAAGCTTTGCGTTCTCTAATCGCCTCGTCAAGATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTTCTCCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGGCATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCCGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAACATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGGTCTCTGAGCGTGTGCTGTGGTGCAGCATTGGACTTCATTATACCTATGCCGCTCGTCTGTCATATCATCGTGTCATGGTTGTGTTGTGTTCTGGTTTAGAGTCCCTAAGTTGTGTTGATACTATTATCCATACTAGTACAATTTGCTTCACTGTGCATCGGTACCAATCGATGATATTATCATTCTACTTCTGTTAATGTTTCTGAGATGTTTGATCCGAGATGAGATTCTGTTTGTGCATTGCTCACATGGTCGTAACCGGCCACTGTTGCGCGTGCCTGTTGATCAATCTGTTTGCGCTTGACGGTTTCTGATGCTTGGAATTGGGGTGTCGATGTTGGTTTGGTTATCTATCCTGGTATGTTTGTTGATTTCATGCGCATTTCAGTCTTTACGGCTTCTGATGCTTGGAATTCTAA
CDS Sequence
- >LOC_Os04g53620.2 CDS ATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTTCTCCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGGCATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCCGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAACATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGGTCTCTGA
- >LOC_Os04g53620.4 CDS ATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTTCTCCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGGCATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCCGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAACATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGGTCTCTGA
- >LOC_Os04g53620.1 CDS ATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTTCTCCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGGCATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCCGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAACATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCTGACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGTATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCTGACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGGTCTCTGA
Protein Sequence
- >LOC_Os04g53620.2 protein MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL*
- >LOC_Os04g53620.4 protein MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL*
- >LOC_Os04g53620.1 protein MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGL*