Gene Details:
- MSU gene ID: LOC_Os04g54800
- RAPdb gene ID: Os04g0640600
- Gene Symbol: OsSK3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Northern blot analysis revealed that the expression of OsSK1 and OsSK2 was induced in rice calli by treatment with the elicitor N-acetylchitoheptaose, and that expression of OsSK1 and OsSK3 was up-regulated specifically during the heading stage of panicle development.
Function-related keywords:
Literature:
- Identification of three shikimate kinase genes in rice: characterization of their differential expression during panicle development and of the enzymatic activities of the encoded proteins . DOI: 10.1007/s00425-005-1559-8 ; PMID: 15891897
Related News:
Gene Resources:
- NCBI ID: AB188836
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g54800.3 cDNA ATAAAGCCTCGCACGGGACCAATCTCCACTTCCGTCCCTCTCCCTCCGCTCGTCCCTGCACACAGAATCCTCCTCCTCTTCCTCCGCGGCGGCGCCGCCGCCGCCGAGTTCTCCATTGATCCGGCGATGGCCGGCAAATCCAATCCCGTCTCCAACAATCAGGAATAATTAAGACCCTGTCGTTGTCGGGTCTGATCGATTTGGAGAGGAGATGGACGCCGGTGTGGGTCTCCGGGCGAAGCCCGGCGCCTGGGCCGGACTCGGAAACCCACGCCGCTCTTCCACGGCGAGGGTTCCGGTGAGGTTCGCGGTGGAGAAGTTCGCTCAGCCGTTGGTTTTGGGCTCTGATCGCCGGAGCTGCGGTGCCAAACTGAAGGTTTCGTGTTCCAGGAAACCGGCAGGTATTGACAAAACCTATTACTCTGCTGATGAAGCTCTTGTTCTAAAGCAAAAAGCAGAGGACGTGGTCCCTTATTTGAATGACCGGTGTATTTACTTAGTTGGAATGATGGGTTCTGGCAAAACTACAGTTGGGAAGATATTAGCTGAAGTATTAGGCTATTCTTTCTTTGACAGCGATAAGTTGGTTGAGAAGGCAGTTGGCATATCATCTGTTGCTGAAATCTTTCAGCTCCATAGTGAAGCATTCTTCAGAGATAATGAGGAGTTACATGAAGAAAGGGTCAACAATCTGGTTAGATGTTCCATTGGATGCACTTGCAAGACGAATTGCTGCAGTAGGAACTGCTTCTCGGCCCCTCTTGCATCAAGAATCTGGTGATCCTTATGCAAAGGCTTATGCAAAACTGACTGCACTTTTTGAACAAAGAATGGACTCATATGCTAATGCTGATGCCAGGGTTTCACTCGAACATATTGCAGTGAAACAAGGACATAGTAATGTGACGACACTTACACCAAGTGCCATTGCTATTGAGGCATTGCTAAAGATGGAGAGCTTTCTTACTGAGAAGGCAATGATCAGAAACTAACCACTTTTGGGTGGTTAAAAGCACATCAACAAACAAAATCTCTTGTTTGTTCTGTTGTATTTATCGCATATACCTAAGGCGTGTTTCTTAGTATAGCATGAACTTGTTAGTCACCCAGTATGAAGGAGGGTGATTTGAGTTTGAACTTGTGTAAATGGATAAGTAATAGCTTTCAATTGAAAGAAAAGTTTGTGTTGTGTTTTGTGCCGATTCCCTGATCTCTTCCTTCCTGACAGATTCAGAAACAAAAGAAATATTTACACAAATCCA
- >LOC_Os04g54800.2 cDNA ATAAAGCCTCGCACGGGACCAATCTCCACTTCCGTCCCTCTCCCTCCGCTCGTCCCTGCACACAGAATCCTCCTCCTCTTCCTCCGCGGCGGCGCCGCCGCCGCCGAGTTCTCCATTGATCCGGCGATGGCCGGCAAATCCAATCCCGTCTCCAACAATCAGGAATAATTAAGACCCTGTCGTTGTCGGGTCTGATCGATTTGGAGAGGAGATGGACGCCGGTGTGGGTCTCCGGGCGAAGCCCGGCGCCTGGGCCGGACTCGGAAACCCACGCCGCTCTTCCACGGCGAGGGTTCCGGTGAGGTTCGCGGTGGAGAAGTTCGCTCAGCCGTTGGTTTTGGGCTCTGATCGCCGGAGCTGCGGTGCCAAACTGAAGGTTTCGTGTTCCAGGAAACCGGCAGGTATTGACAAAACCTATTACTCTGCTGATGAAGCTCTTGTTCTAAAGCAAAAAGCAGAGGACGTGGTCCCTTATTTGAATGACCGGTGTATTTACTTAGTTGGAATGATGGGTTCTGGCAAAACTACAGTTGGGAAGATATTAGCTGAAGTATTAGGCTATTCTTTCTTTGACAGCGATAAGTTGGTTGAGAAGGCAGTTGGCATATCATCTGTTGCTGAAATCTTTCAGCTCCATAGTGAAGCATTCTTCAGAGATAATGAGGAGTTACATGAAGAAAGGGTCAACAATCTGGTTAGATGTTCCATTGGATGCACTTGCAAGACGAATTGCTGCAGTAGGAACTGCTTCTCGGCCCCTCTTGCATCAAGAATCTGGTGATCCTTATGCAAAGGCTTATGCAAAACTGACTGCACTTTTTGAACAAAGAATGGACTCATATGCTAATGCTGATGCCAGGGTTTCACTCGAACATATTGCAGTGAAACAAGGACATAGTAATGTGACGACACTTACACCAAGTGCCATTGCTATTGAGGCATTGCTAAAGATGGAGAGCTTTCTTACTGAGAAGGCAATGATCAGAAACTAACCACTTTTGGGTGGTTAAAAGCACATCAACAAACAAAATCTCTTGTTTGTTCTGTTGTATTTATCGCATATACCTAAGGCGTGTTTCTTAGTATAGCATGAACTTGTTAGTCACCCAGTATGAAGGAGGGTGATTTGAGTTTGAACTTGTGTAAATGGATAAGTAATAGCTTTCAATTGAAAGAAAAGTTTGTGTTGTGTTTTGTGCCGATTCCCTGATCTCTTCCTTCCTGACAGATTCAGAAACAAAAGAAATATTTACACAAATCCA
- >LOC_Os04g54800.1 cDNA ATAAAGCCTCGCACGGGACCAATCTCCACTTCCGTCCCTCTCCCTCCGCTCGTCCCTGCACACAGAATCCTCCTCCTCTTCCTCCGCGGCGGCGCCGCCGCCGCCGAGTTCTCCATTGATCCGGCGATGGCCGGCAAATCCAATCCCGTCTCCAACAATCAGGAATAATTAAGACCCTGTCGTTGTCGGGTCTGATCGATTTGGAGAGGAGATGGACGCCGGTGTGGGTCTCCGGGCGAAGCCCGGCGCCTGGGCCGGACTCGGAAACCCACGCCGCTCTTCCACGGCGAGGGTTCCGGTGAGGTTCGCGGTGGAGAAGTTCGCTCAGCCGTTGGTTTTGGGCTCTGATCGCCGGAGCTGCGGTGCCAAACTGAAGGTTTCGTGTTCCAGGAAACCGGCAGGTATTGACAAAACCTATTACTCTGCTGATGAAGCTCTTGTTCTAAAGCAAAAAGCAGAGGACGTGGTCCCTTATTTGAATGACCGGTGTATTTACTTAGTTGGAATGATGGGTTCTGGCAAAACTACAGTTGGGAAGATATTAGCTGAAGTATTAGGCTATTCTTTCTTTGACAGCGATAAGTTGGTTGAGAAGGCAGTTGGCATATCATCTGTTGCTGAAATCTTTCAGCTCCATAGTGAAGCATTCTTCAGAGATAATGAGGAGTTACATGAAGAAAGGGTCAACAATCTGGTTAGATGTTCCATTGGATGCACTTGCAAGACGAATTGCTGCAGTAGGAACTGCTTCTCGGCCCCTCTTGCATCAAGAATCTGGTGATCCTTATGCAAAGGCTTATGCAAAACTGACTGCACTTTTTGAACAAAGAATGGACTCATATGCTAATGCTGATGCCAGGGTTTCACTCGAACATATTGCAGTGAAACAAGGACATAGTAATGTGACGACACTTACACCAAGTGCCATTGCTATTGAGGCATTGCTAAAGATGGAGAGCTTTCTTACTGAGAAGGCAATGATCAGAAACTAACCACTTTTGGGTGGTTAAAAGCACATCAACAAACAAAATCTCTTGTTTGTTCTGTTGTATTTATCGCATATACCTAAGGCGTGTTTCTTAGTATAGCATGAACTTGTTAGTCACCCAGTATGAAGGAGGGTGATTTGAGTTTGAACTTGTGTAAATGGATAAGTAATAGCTTTCAATTGAAAGAAAAGTTTGTGTTGTGTTTTGTGCCGATTCCCTGATCTCTTCCTTCCTGACAGATTCAGAAACAAAAGAAATATTTACACAAATCCA
CDS Sequence
- >LOC_Os04g54800.3 CDS ATGGACGCCGGTGTGGGTCTCCGGGCGAAGCCCGGCGCCTGGGCCGGACTCGGAAACCCACGCCGCTCTTCCACGGCGAGGGTTCCGGTGAGGTTCGCGGTGGAGAAGTTCGCTCAGCCGTTGGTTTTGGGCTCTGATCGCCGGAGCTGCGGTGCCAAACTGAAGGTTTCGTGTTCCAGGAAACCGGCAGGTATTGACAAAACCTATTACTCTGCTGATGAAGCTCTTGTTCTAAAGCAAAAAGCAGAGGACGTGGTCCCTTATTTGAATGACCGGTGTATTTACTTAGTTGGAATGATGGGTTCTGGCAAAACTACAGTTGGGAAGATATTAGCTGAAGTATTAGGCTATTCTTTCTTTGACAGCGATAAGTTGGTTGAGAAGGCAGTTGGCATATCATCTGTTGCTGAAATCTTTCAGCTCCATAGTGAAGCATTCTTCAGAGATAATGAGGAGTTACATGAAGAAAGGGTCAACAATCTGGTTAGATGTTCCATTGGATGCACTTGCAAGACGAATTGCTGCAGTAGGAACTGCTTCTCGGCCCCTCTTGCATCAAGAATCTGGTGA
- >LOC_Os04g54800.2 CDS ATGGACGCCGGTGTGGGTCTCCGGGCGAAGCCCGGCGCCTGGGCCGGACTCGGAAACCCACGCCGCTCTTCCACGGCGAGGGTTCCGGTGAGGTTCGCGGTGGAGAAGTTCGCTCAGCCGTTGGTTTTGGGCTCTGATCGCCGGAGCTGCGGTGCCAAACTGAAGGTTTCGTGTTCCAGGAAACCGGCAGGTATTGACAAAACCTATTACTCTGCTGATGAAGCTCTTGTTCTAAAGCAAAAAGCAGAGGACGTGGTCCCTTATTTGAATGACCGGTGTATTTACTTAGTTGGAATGATGGGTTCTGGCAAAACTACAGTTGGGAAGATATTAGCTGAAGTATTAGGCTATTCTTTCTTTGACAGCGATAAGTTGGTTGAGAAGGCAGTTGGCATATCATCTGTTGCTGAAATCTTTCAGCTCCATAGTGAAGCATTCTTCAGAGATAATGAGGAGTTACATGAAGAAAGGGTCAACAATCTGGTTAGATGTTCCATTGGATGCACTTGCAAGACGAATTGCTGCAGTAGGAACTGCTTCTCGGCCCCTCTTGCATCAAGAATCTGGTGA
- >LOC_Os04g54800.1 CDS ATGGACGCCGGTGTGGGTCTCCGGGCGAAGCCCGGCGCCTGGGCCGGACTCGGAAACCCACGCCGCTCTTCCACGGCGAGGGTTCCGGTGAGGTTCGCGGTGGAGAAGTTCGCTCAGCCGTTGGTTTTGGGCTCTGATCGCCGGAGCTGCGGTGCCAAACTGAAGGTTTCGTGTTCCAGGAAACCGGCAGGTATTGACAAAACCTATTACTCTGCTGATGAAGCTCTTGTTCTAAAGCAAAAAGCAGAGGACGTGGTCCCTTATTTGAATGACCGGTGTATTTACTTAGTTGGAATGATGGGTTCTGGCAAAACTACAGTTGGGAAGATATTAGCTGAAGTATTAGGCTATTCTTTCTTTGACAGCGATAAGTTGGTTGAGAAGGCAGTTGGCATATCATCTGTTGCTGAAATCTTTCAGCTCCATAGTGAAGCATTCTTCAGAGATAATGAGGAGTTACATGAAGAAAGGGTCAACAATCTGGTTAGATGTTCCATTGGATGCACTTGCAAGACGAATTGCTGCAGTAGGAACTGCTTCTCGGCCCCTCTTGCATCAAGAATCTGGTGA
Protein Sequence
- >LOC_Os04g54800.3 protein MDAGVGLRAKPGAWAGLGNPRRSSTARVPVRFAVEKFAQPLVLGSDRRSCGAKLKVSCSRKPAGIDKTYYSADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNEELHEERVNNLVRCSIGCTCKTNCCSRNCFSAPLASRIW*
- >LOC_Os04g54800.2 protein MDAGVGLRAKPGAWAGLGNPRRSSTARVPVRFAVEKFAQPLVLGSDRRSCGAKLKVSCSRKPAGIDKTYYSADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNEELHEERVNNLVRCSIGCTCKTNCCSRNCFSAPLASRIW*
- >LOC_Os04g54800.1 protein MDAGVGLRAKPGAWAGLGNPRRSSTARVPVRFAVEKFAQPLVLGSDRRSCGAKLKVSCSRKPAGIDKTYYSADEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNEELHEERVNNLVRCSIGCTCKTNCCSRNCFSAPLASRIW*