Gene Details:
- MSU gene ID: LOC_Os05g05180
- RAPdb gene ID: Os05g0143800
- Gene Symbol: OsGH3.6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The group I GH3 family genes encoding JA-Ile synthetase act as positive regulator in the resistance of rice to Xanthomonas oryzae pv. oryzae.
Function-related keywords:
Literature:
- The group I GH3 family genes encoding JA-Ile synthetase act as positive regulator in the resistance of rice to Xanthomonas oryzae pv. oryzae . DOI: 10.1016/j.bbrc.2018.12.057 ; PMID: 30553449
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g05180.1 cDNA AGCTAATTTCGAGCTGCACCACCTCCGGGTTGACCAACCCAGCCGCCCGCCAATGGCGACCGCCGCCGCCGACGAGCTCGCGCTGCGGCGGCTGGACGACGCCACCCGCGACGCCCGGAGGCTTCAGCTCGAGACCCTCCGCGCCATCCTCGCCGAGAATGCCGGCGCCGCCTACCTCCGCCGGTACATCCCCTCCGACGGCGGCGCCCACCACCTCCTCCGCTCCACCGACCTCGCCGCGGCGGCCGACGAATTCCGCCTCCTCGTCCCCGTCACCTCCTACGACGACTACGCCGAGTCCATCCGCCGCGTCGCGGATGGCGACGCTGCCCCCGACGAGCTCTCGCCGCGCCCCCTCCTCTGCTTCTTCCTCAGCTCTGGGACGAGCTCGCTGCGGCCGAAGCTGATACCCTACTTGGATTCGCCGGGGGCGAGGGCCGCCACCGCCGCCGTGATGCAGGCCAACTCCGCCCTCGTCAGAAGGTGCTGTTCCCTCCACGGCCGGCGGTGAGCAAGGCGCTGTGGTTCTTGTACGCCGGCGAGGTCAGGAAGACGAAGGGTGGATACGAGGCCATGGCGGCGACGGCGTGGGGCATCCGGAGCAGCGGCATCCGGGGAGCCTCGCCGGTGATGTCCGCCTGCGTCAGCCCCGCCGAGGTCATCCTCGGCGCCGACCACCAGCAGCAGATGTACTGCCACCTCCTCTGCGGCCTCCGCCGATGGGACGCCGTCGACTGCATCCGCGCGCCGTACGCCGCCGCCCTGGCGCGCGCCCTCCGCCTCCTCCAGTCCAAGTGGCGTCAACTCTGCGATGACCTCGAGTGCGGGACAGTCTGCGCCGACGTCGTCACCGACGCGGCGATGAGAGGCGCCGTCCAGGACGGAGTGCTCGCCGGGCCATGCCCCGAGCTCGCCGGCCGCGTCCGCCGAATCTGCGAGAGGGATGACTGGCGCGGCGTGCTGCGCCAACTGTGGCCGGACGCGAGGTACATCTCCTGCGTCACGACGGGGACCATGGAGCAGTACTTCCCGGCGATCAAGCACTTCGCCGGCGAGGCGTTGCCGGTGCTCGGAACGGACTACCTCGCCTCCGAGTGCGCCATCGGCATCAACCTGGAGCGCACGTCGCCGCCTGAGGAAACCACCTACGTGCTCCTCCCCAGGGCGGCATACTTCGAGTTCATCCCGTTCGACATGGACGCCGCCGGCCGCGGCGCCGCCGCGGCAGAGCCGGTGGACATCGCCGGCGTGGAGGCCGGCAAGACGTACGAGTTGGTGGCCACCACGTTCCGTGGGCTGTACCGGTACAAAGTCGGCGACGTCGTGAAGATCGCCGGCTTCCACCACTCCTCCCCTCGGCTTCAGTTCGTGACCCGCGCGCCGCCGCCGCAAGAACACGGCGAGGTGCTCACCGAGAGGGACGTCATGGCCGCCATGGACACCTTCCAGCTCATGCTAAAGGACGGCGGCGAGGTTATCGAATTTGCGGCGTTCATCATTGACGGCGACGGAGGCCAGCGGCGGCGGCGATGCGCGACGATCGCCGTCGAGGTGAGCAATGGAAGCAAGCTGCTCGACCATGAGAGGTCAGCCGCCTTCCTCAGGCGATGCACCGCGCCGCTCGAGGGCTGCCTCGGCGGAGCGTACAGGCTGAGCAGAGCCACCGGCGACGTCGCGCCGCTGGAGGTCGCCGTGGTGAGGCCCGGCACGTTCGACAGGCTCGCCGAGGCCGCGATCCGCGGCGGCGCTCCGGCGAACCAGTACAAGCCGCCCAAGATCGTCAGGCACCGGCACCTCGTCGATGTGCTGCAATCCTCCGTGGTGTGCAGCAGCAGCTCAATCACTGAACCAGCTGCTCACTAGCATCTGTCTCATTGTGTCACTGAACCAGCGGCAGTTTCTTGATCGTGAGTCCAATTCCGGCACTGACAAGGTGTTCATCTCCGATTCGATTCTGAATTTTCAGCACTGGGGAGGTTTCAGTCTCCGATTCGATCTACAAGAAGAATCCCTCACCCTTTATAAGGATCACCCAAGCTAGAGGGAATCGTCGGTCGGTTGCTCTCGTTTGGTCAGCGCTGATTTCAGAAATTCAGACTTGCGTCCCCGCAAAAAAAAAAAAAAAGAAAAGAAA
- >LOC_Os05g05180.2 cDNA AGCTAATTTCGAGCTGCACCACCTCCGGGTTGACCAACCCAGCCGCCCGCCAATGGCGACCGCCGCCGCCGACGAGCTCGCGCTGCGGCGGCTGGACGACGCCACCCGCGACGCCCGGAGGCTTCAGCTCGAGACCCTCCGCGCCATCCTCGCCGAGAATGCCGGCGCCGCCTACCTCCGCCGGTACATCCCCTCCGACGGCGGCGCCCACCACCTCCTCCGCTCCACCGACCTCGCCGCGGCGGCCGACGAATTCCGCCTCCTCGTCCCCGTCACCTCCTACGACGACTACGCCGAGTCCATCCGCCGCGTCGCGGATGGCGACGCTGCCCCCGACGAGCTCTCGCCGCGCCCCCTCCTCTGCTTCTTCCTCAGCTCTGGGACGAGCTCGCTGCGGCCGAAGCTGATACCCTACTTGGATTCGCCGGGGGCGAGGGCCGCCACCGCCGCCGTGATGCAGGCCAACTCCGCCCTCGTCAGAAGGTGCTGTTCCCTCCACGGCCGGCGGTGAGCAAGGCGCTGTGGTTCTTGTACGCCGGCGAGGTCAGGAAGACGAAGGGTGGATACGAGGCCATGGCGGCGACGGCGTGGGGCATCCGGAGCAGCGGCATCCGGGGAGCCTCGCCGGTGATGTCCGCCTGCGTCAGCCCCGCCGAGGTCATCCTCGGCGCCGACCACCAGCAGCAGATGTACTGCCACCTCCTCTGCGGCCTCCGCCGATGGGACGCCGTCGACTGCATCCGCGCGCCGTACGCCGCCGCCCTGGCGCGCGCCCTCCGCCTCCTCCAGTCCAAGTGGCGTCAACTCTGCGATGACCTCGAGTGCGGGACAGTCTGCGCCGACGTCGTCACCGACGCGGCGATGAGAGGCGCCGTCCAGGACGGAGTGCTCGCCGGGCCATGCCCCGAGCTCGCCGGCCGCGTCCGCCGAATCTGCGAGAGGGATGACTGGCGCGGCGTGCTGCGCCAACTGTGGCCGGACGCGAGGTACATCTCCTGCGTCACGACGGGGACCATGGAGCAGTACTTCCCGGCGATCAAGCACTTCGCCGGCGAGGCGTTGCCGGTGCTCGGAACGGACTACCTCGCCTCCGAGTGCGCCATCGGCATCAACCTGGAGCGCACGTCGCCGCCTGAGGAAACCACCTACGTGCTCCTCCCCAGGGCGGCATACTTCGAGTTCATCCCGTTCGACATGGACGCCGCCGGCCGCGGCGCCGCCGCGGCAGAGCCGGTGGACATCGCCGGCGTGGAGGCCGGCAAGACGTACGAGTTGGTGGCCACCACGTTCCGTGGGCTGTACCGGTACAAAGTCGGCGACGTCGTGAAGATCGCCGGCTTCCACCACTCCTCCCCTCGGCTTCAGTTCGTGACCCGCGCGCCGCCGCCGCAAGAACACGGCGAGGTGCTCACCGAGAGGGACGTCATGGCCGCCATGGACACCTTCCAGCTCATGCTAAAGGACGGCGGCGAGGTTATCGAATTTGCGGCGTTCATCATTGACGGCGACGGAGGCCAGCGGCGGCGGCGATGCGCGACGATCGCCGTCGAGGTGAGCAATGGAAGCAAGCTGCTCGACCATGAGAGGTCAGCCGCCTTCCTCAGGCGATGCACCGCGCCGCTCGAGGGCTGCCTCGGCGGAGCGTACAGGCTGAGCAGAGCCACCGGCGACGTCGCGCCGCTGGAGGTCGCCGTGGTGAGGCCCGGCACGTTCGACAGGCTCGCCGAGGCCGCGATCCGCGGCGGCGCTCCGGCGAACCAGTACAAGCCGCCCAAGATCGTCAGGCACCGGCACCTCGTCGATGTGCTGCAATCCTCCGTGGTGTGCAGCAGCAGCTCAATCACTGAACCAGCTGCTCACTAGCATCTGTCTCATTGTGTCACTGAACCAGCGGCAGTTTCTTGATCGTGAGTCCAATTCCGGCACTGACAAGGTGTTCATCTCCGATTCGATTCTGAATTTTCAGCACTGGGGAGGTTTCAGTCTCCGATTCGATCTACAAGAAGAATCCCTCACCCTTTATAAGGATCACCCAAGCTAGAGGGAATCGTCGGTCGGTTGCTCTCGTTTGGTCAGCGCTGATTTCAGAAATTCAGACTTGCGTCCCCGCAAAAAAAAAAAAAAAGAAAAGAAA
CDS Sequence
- >LOC_Os05g05180.1 CDS ATGGCGGCGACGGCGTGGGGCATCCGGAGCAGCGGCATCCGGGGAGCCTCGCCGGTGATGTCCGCCTGCGTCAGCCCCGCCGAGGTCATCCTCGGCGCCGACCACCAGCAGCAGATGTACTGCCACCTCCTCTGCGGCCTCCGCCGATGGGACGCCGTCGACTGCATCCGCGCGCCGTACGCCGCCGCCCTGGCGCGCGCCCTCCGCCTCCTCCAGTCCAAGTGGCGTCAACTCTGCGATGACCTCGAGTGCGGGACAGTCTGCGCCGACGTCGTCACCGACGCGGCGATGAGAGGCGCCGTCCAGGACGGAGTGCTCGCCGGGCCATGCCCCGAGCTCGCCGGCCGCGTCCGCCGAATCTGCGAGAGGGATGACTGGCGCGGCGTGCTGCGCCAACTGTGGCCGGACGCGAGGTACATCTCCTGCGTCACGACGGGGACCATGGAGCAGTACTTCCCGGCGATCAAGCACTTCGCCGGCGAGGCGTTGCCGGTGCTCGGAACGGACTACCTCGCCTCCGAGTGCGCCATCGGCATCAACCTGGAGCGCACGTCGCCGCCTGAGGAAACCACCTACGTGCTCCTCCCCAGGGCGGCATACTTCGAGTTCATCCCGTTCGACATGGACGCCGCCGGCCGCGGCGCCGCCGCGGCAGAGCCGGTGGACATCGCCGGCGTGGAGGCCGGCAAGACGTACGAGTTGGTGGCCACCACGTTCCGTGGGCTGTACCGGTACAAAGTCGGCGACGTCGTGAAGATCGCCGGCTTCCACCACTCCTCCCCTCGGCTTCAGTTCGTGACCCGCGCGCCGCCGCCGCAAGAACACGGCGAGGTGCTCACCGAGAGGGACGTCATGGCCGCCATGGACACCTTCCAGCTCATGCTAAAGGACGGCGGCGAGGTTATCGAATTTGCGGCGTTCATCATTGACGGCGACGGAGGCCAGCGGCGGCGGCGATGCGCGACGATCGCCGTCGAGGTGAGCAATGGAAGCAAGCTGCTCGACCATGAGAGGTCAGCCGCCTTCCTCAGGCGATGCACCGCGCCGCTCGAGGGCTGCCTCGGCGGAGCGTACAGGCTGAGCAGAGCCACCGGCGACGTCGCGCCGCTGGAGGTCGCCGTGGTGAGGCCCGGCACGTTCGACAGGCTCGCCGAGGCCGCGATCCGCGGCGGCGCTCCGGCGAACCAGTACAAGCCGCCCAAGATCGTCAGGCACCGGCACCTCGTCGATGTGCTGCAATCCTCCGTGGTGTGCAGCAGCAGCTCAATCACTGAACCAGCTGCTCACTAG
- >LOC_Os05g05180.2 CDS ATGGCGGCGACGGCGTGGGGCATCCGGAGCAGCGGCATCCGGGGAGCCTCGCCGGTGATGTCCGCCTGCGTCAGCCCCGCCGAGGTCATCCTCGGCGCCGACCACCAGCAGCAGATGTACTGCCACCTCCTCTGCGGCCTCCGCCGATGGGACGCCGTCGACTGCATCCGCGCGCCGTACGCCGCCGCCCTGGCGCGCGCCCTCCGCCTCCTCCAGTCCAAGTGGCGTCAACTCTGCGATGACCTCGAGTGCGGGACAGTCTGCGCCGACGTCGTCACCGACGCGGCGATGAGAGGCGCCGTCCAGGACGGAGTGCTCGCCGGGCCATGCCCCGAGCTCGCCGGCCGCGTCCGCCGAATCTGCGAGAGGGATGACTGGCGCGGCGTGCTGCGCCAACTGTGGCCGGACGCGAGGTACATCTCCTGCGTCACGACGGGGACCATGGAGCAGTACTTCCCGGCGATCAAGCACTTCGCCGGCGAGGCGTTGCCGGTGCTCGGAACGGACTACCTCGCCTCCGAGTGCGCCATCGGCATCAACCTGGAGCGCACGTCGCCGCCTGAGGAAACCACCTACGTGCTCCTCCCCAGGGCGGCATACTTCGAGTTCATCCCGTTCGACATGGACGCCGCCGGCCGCGGCGCCGCCGCGGCAGAGCCGGTGGACATCGCCGGCGTGGAGGCCGGCAAGACGTACGAGTTGGTGGCCACCACGTTCCGTGGGCTGTACCGGTACAAAGTCGGCGACGTCGTGAAGATCGCCGGCTTCCACCACTCCTCCCCTCGGCTTCAGTTCGTGACCCGCGCGCCGCCGCCGCAAGAACACGGCGAGGTGCTCACCGAGAGGGACGTCATGGCCGCCATGGACACCTTCCAGCTCATGCTAAAGGACGGCGGCGAGGTTATCGAATTTGCGGCGTTCATCATTGACGGCGACGGAGGCCAGCGGCGGCGGCGATGCGCGACGATCGCCGTCGAGGTGAGCAATGGAAGCAAGCTGCTCGACCATGAGAGGTCAGCCGCCTTCCTCAGGCGATGCACCGCGCCGCTCGAGGGCTGCCTCGGCGGAGCGTACAGGCTGAGCAGAGCCACCGGCGACGTCGCGCCGCTGGAGGTCGCCGTGGTGAGGCCCGGCACGTTCGACAGGCTCGCCGAGGCCGCGATCCGCGGCGGCGCTCCGGCGAACCAGTACAAGCCGCCCAAGATCGTCAGGCACCGGCACCTCGTCGATGTGCTGCAATCCTCCGTGGTGTGCAGCAGCAGCTCAATCACTGAACCAGCTGCTCACTAG
Protein Sequence
- >LOC_Os05g05180.1 protein MAATAWGIRSSGIRGASPVMSACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPYAAALARALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRICERDDWRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYFEFIPFDMDAAGRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSPRLQFVTRAPPPQEHGEVLTERDVMAAMDTFQLMLKDGGEVIEFAAFIIDGDGGQRRRRCATIAVEVSNGSKLLDHERSAAFLRRCTAPLEGCLGGAYRLSRATGDVAPLEVAVVRPGTFDRLAEAAIRGGAPANQYKPPKIVRHRHLVDVLQSSVVCSSSSITEPAAH*
- >LOC_Os05g05180.2 protein MAATAWGIRSSGIRGASPVMSACVSPAEVILGADHQQQMYCHLLCGLRRWDAVDCIRAPYAAALARALRLLQSKWRQLCDDLECGTVCADVVTDAAMRGAVQDGVLAGPCPELAGRVRRICERDDWRGVLRQLWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTYVLLPRAAYFEFIPFDMDAAGRGAAAAEPVDIAGVEAGKTYELVATTFRGLYRYKVGDVVKIAGFHHSSPRLQFVTRAPPPQEHGEVLTERDVMAAMDTFQLMLKDGGEVIEFAAFIIDGDGGQRRRRCATIAVEVSNGSKLLDHERSAAFLRRCTAPLEGCLGGAYRLSRATGDVAPLEVAVVRPGTFDRLAEAAIRGGAPANQYKPPKIVRHRHLVDVLQSSVVCSSSSITEPAAH*