Gene Details:
- MSU gene ID: LOC_Os05g06720
- RAPdb gene ID: Os05g0159300
- Gene Symbol: DARX1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Two-dimensional 13C-13C correlation spectroscopy and atomic force microscopy further revealed that the abnormal acetylation pattern observed in DARX1 interrupts arabinoxylan conformation and cellulose microfibril orientation, resulting in compromised secondary wall patterning and reduced mechanical strength.
Function-related keywords:
Literature:
- Arabinosyl Deacetylase Modulates the Arabinoxylan Acetylation Profile and Secondary Wall Formation . DOI: 10.1105/tpc.18.00894 ; PMID: 30886126
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g06720.3 cDNA GCTTGATGTGCAGCTTGATCAGTTCATATTTTTCAAGGAGAGATGCTTGGAGTCCATCGAAAGAGGTCGGTTTGATCTTAATTTGGTGACATTTTGTTCTAAGCAAAGTGTTCCTTTTTTGCGCAATTAATTGGGTTTCCGACTTATTTGCATTGTTTTGGAGTGACAAAGTTGCTTAATTTTGGTGAATGTCATCCAGGTGAGGATGCCCCAATTGATAGCAAAGGGTTTGAAAATGCCCTCTATACCATGGACATAGGGCACAATGATTTAATGGGCGTTTTGCACTTGTCCTATGATGAAATTCTTCGAAAGCTTCCTCCCATAGTTGCTGAAATCAGGAAAGCCATTGAGGTACATTTGGTTCAAGTCAATAAAACAGTAGCACATATGATAAATTATTCTCAGTAAACAGCTCAAATTTTTATCTAAACTTCTCCCTTAAACCAGTAAGTTCTGAAGTAAAAAAAAAATACTATCAGTTATTCAGAGAAATGATCATTGAACCCTTGCCAAACTGCAGACTTTGCATAAGAATGGGGCCAAGAAGTTTTGGATACATGGAACGGGTGCATTGGGTTGCCTGCCTCAGAAGCTTGCTACGAGGGGGGAAATTGATCGTGATCTCGACGAGCATGGCTGCATCACAAGAATCAACAATGTTGCCAAGAGGTTCAACAAGTTGCTGAGCGAAACCTGCGATGATCTGCGCTTGCAATTCGCAAGCTCGACGATCGTCTTCGTGGACATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGGATTGAGAAGCCATTGATGACATGTTGTGGACATGGAGGGCCCCCTTACAACTATGATCCGAAGAAAAGCTGCACGGCCAATGACAAGGACCTGTGTAAGCTTGGTGAGAAGTTCATCAGCTGGGATGGGGTCCACTTCACCGATGCTGCAAACGAGATCGTTGCTTCTAAAGTGATAAGTGGCGAATTTTCCATTCCTAGGATCAAGCTGACCGCCAGCGTTGTCAGGCCCAAAAAGGCTAAAAATTCGCGGTTATGAAAAATTAAGATTATTTTGGTTTCCCAAAGGAAATGGTGAAGGTGAATCACTAACAGATCTGGCCAACAGAAGGGAATTCATTTGATTTCAGGCCCTTTTCGGTCATTGAGGAAGAACAGAATATGAAGAATTTCAAAATTTTATTTTTTTTGTACACTTGGGGTGTGTGTGTATATCCTAGGGGGTTGATACGTGCAGGTTAATACTATGTATAATTCTTTTCTTTAATTTTGATAAATAAATAGAGATGAATCTATAAATTTAAATCAGAACTCC
- >LOC_Os05g06720.1 cDNA GCTTGATGTGCAGCTTGATCAGTTCATATTTTTCAAGGAGAGATGCTTGGAGTCCATCGAAAGAGGTCGGTTTGATCTTAATTTGGTGACATTTTGTTCTAAGCAAAGTGTTCCTTTTTTGCGCAATTAATTGGGTTTCCGACTTATTTGCATTGTTTTGGAGTGACAAAGTTGCTTAATTTTGGTGAATGTCATCCAGGTGAGGATGCCCCAATTGATAGCAAAGGGTTTGAAAATGCCCTCTATACCATGGACATAGGGCACAATGATTTAATGGGCGTTTTGCACTTGTCCTATGATGAAATTCTTCGAAAGCTTCCTCCCATAGTTGCTGAAATCAGGAAAGCCATTGAGGTACATTTGGTTCAAGTCAATAAAACAGTAGCACATATGATAAATTATTCTCAGTAAACAGCTCAAATTTTTATCTAAACTTCTCCCTTAAACCAGTAAGTTCTGAAGTAAAAAAAAAATACTATCAGTTATTCAGAGAAATGATCATTGAACCCTTGCCAAACTGCAGACTTTGCATAAGAATGGGGCCAAGAAGTTTTGGATACATGGAACGGGTGCATTGGGTTGCCTGCCTCAGAAGCTTGCTACGAGGGGGGAAATTGATCGTGATCTCGACGAGCATGGCTGCATCACAAGAATCAACAATGTTGCCAAGAGGTTCAACAAGTTGCTGAGCGAAACCTGCGATGATCTGCGCTTGCAATTCGCAAGCTCGACGATCGTCTTCGTGGACATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGGATTGAGAAGCCATTGATGACATGTTGTGGACATGGAGGGCCCCCTTACAACTATGATCCGAAGAAAAGCTGCACGGCCAATGACAAGGACCTGTGTAAGCTTGGTGAGAAGTTCATCAGCTGGGATGGGGTCCACTTCACCGATGCTGCAAACGAGATCGTTGCTTCTAAAGTGATAAGTGGCGAATTTTCCATTCCTAGGATCAAGCTGACCGCCAGCGTTGTCAGGCCCAAAAAGGCTAAAAATTCGCGGTTATGAAAAATTAAGATTATTTTGGTTTCCCAAAGGAAATGGTGAAGGTGAATCACTAACAGATCTGGCCAACAGAAGGGAATTCATTTGATTTCAGGCCCTTTTCGGTCATTGAGGAAGAACAGAATATGAAGAATTTCAAAATTTTATTTTTTTTGTACACTTGGGGTGTGTGTGTATATCCTAGGGGGTTGATACGTGCAGGTTAATACTATGTATAATTCTTTTCTTTAATTTTGATAAATAAATAGAGATGAATCTATAAATTTAAATCAGAACTCC
- >LOC_Os05g06720.2 cDNA GCTTGATGTGCAGCTTGATCAGTTCATATTTTTCAAGGAGAGATGCTTGGAGTCCATCGAAAGAGGTCGGTTTGATCTTAATTTGGTGACATTTTGTTCTAAGCAAAGTGTTCCTTTTTTGCGCAATTAATTGGGTTTCCGACTTATTTGCATTGTTTTGGAGTGACAAAGTTGCTTAATTTTGGTGAATGTCATCCAGGTGAGGATGCCCCAATTGATAGCAAAGGGTTTGAAAATGCCCTCTATACCATGGACATAGGGCACAATGATTTAATGGGCGTTTTGCACTTGTCCTATGATGAAATTCTTCGAAAGCTTCCTCCCATAGTTGCTGAAATCAGGAAAGCCATTGAGGTACATTTGGTTCAAGTCAATAAAACAGTAGCACATATGATAAATTATTCTCAGTAAACAGCTCAAATTTTTATCTAAACTTCTCCCTTAAACCAGTAAGTTCTGAAGTAAAAAAAAAATACTATCAGTTATTCAGAGAAATGATCATTGAACCCTTGCCAAACTGCAGACTTTGCATAAGAATGGGGCCAAGAAGTTTTGGATACATGGAACGGGTGCATTGGGTTGCCTGCCTCAGAAGCTTGCTACGAGGGGGGAAATTGATCGTGATCTCGACGAGCATGGCTGCATCACAAGAATCAACAATGTTGCCAAGAGGTTCAACAAGTTGCTGAGCGAAACCTGCGATGATCTGCGCTTGCAATTCGCAAGCTCGACGATCGTCTTCGTGGACATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGGATTGAGAAGCCATTGATGACATGTTGTGGACATGGAGGGCCCCCTTACAACTATGATCCGAAGAAAAGCTGCACGGCCAATGACAAGGACCTGTGTAAGCTTGGTGAGAAGTTCATCAGCTGGGATGGGGTCCACTTCACCGATGCTGCAAACGAGATCGTTGCTTCTAAAGTGATAAGTGGCGAATTTTCCATTCCTAGGATCAAGCTGACCGCCAGCGTTGTCAGGCCCAAAAAGGCTAAAAATTCGCGGTTATGAAAAATTAAGATTATTTTGGTTTCCCAAAGGAAATGGTGAAGGTGAATCACTAACAGATCTGGCCAACAGAAGGGAATTCATTTGATTTCAGGCCCTTTTCGGTCATTGAGGAAGAACAGAATATGAAGAATTTCAAAATTTTATTTTTTTTGTACACTTGGGGTGTGTGTGTATATCCTAGGGGGTTGATACGTGCAGGTTAATACTATGTATAATTCTTTTCTTTAATTTTGATAAATAAATAGAGATGAATCTATAAATTTAAATCAGAACTCC
CDS Sequence
- >LOC_Os05g06720.3 CDS ATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGGATTGAGAAGCCATTGATGACATGTTGTGGACATGGAGGGCCCCCTTACAACTATGATCCGAAGAAAAGCTGCACGGCCAATGACAAGGACCTGTGTAAGCTTGGTGAGAAGTTCATCAGCTGGGATGGGGTCCACTTCACCGATGCTGCAAACGAGATCGTTGCTTCTAAAGTGATAAGTGGCGAATTTTCCATTCCTAGGATCAAGCTGACCGCCAGCGTTGTCAGGCCCAAAAAGGCTAAAAATTCGCGGTTATGA
- >LOC_Os05g06720.1 CDS ATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGGATTGAGAAGCCATTGATGACATGTTGTGGACATGGAGGGCCCCCTTACAACTATGATCCGAAGAAAAGCTGCACGGCCAATGACAAGGACCTGTGTAAGCTTGGTGAGAAGTTCATCAGCTGGGATGGGGTCCACTTCACCGATGCTGCAAACGAGATCGTTGCTTCTAAAGTGATAAGTGGCGAATTTTCCATTCCTAGGATCAAGCTGACCGCCAGCGTTGTCAGGCCCAAAAAGGCTAAAAATTCGCGGTTATGA
- >LOC_Os05g06720.2 CDS ATGTTCGCCATCAAGTATGATCTTGTTGCCAACCACACGAAACACGGGATTGAGAAGCCATTGATGACATGTTGTGGACATGGAGGGCCCCCTTACAACTATGATCCGAAGAAAAGCTGCACGGCCAATGACAAGGACCTGTGTAAGCTTGGTGAGAAGTTCATCAGCTGGGATGGGGTCCACTTCACCGATGCTGCAAACGAGATCGTTGCTTCTAAAGTGATAAGTGGCGAATTTTCCATTCCTAGGATCAAGCTGACCGCCAGCGTTGTCAGGCCCAAAAAGGCTAAAAATTCGCGGTTATGA
Protein Sequence
- >LOC_Os05g06720.3 protein MFAIKYDLVANHTKHGIEKPLMTCCGHGGPPYNYDPKKSCTANDKDLCKLGEKFISWDGVHFTDAANEIVASKVISGEFSIPRIKLTASVVRPKKAKNSRL*
- >LOC_Os05g06720.1 protein MFAIKYDLVANHTKHGIEKPLMTCCGHGGPPYNYDPKKSCTANDKDLCKLGEKFISWDGVHFTDAANEIVASKVISGEFSIPRIKLTASVVRPKKAKNSRL*
- >LOC_Os05g06720.2 protein MFAIKYDLVANHTKHGIEKPLMTCCGHGGPPYNYDPKKSCTANDKDLCKLGEKFISWDGVHFTDAANEIVASKVISGEFSIPRIKLTASVVRPKKAKNSRL*