Gene Details:
- MSU gene ID: LOC_Os05g41220
- RAPdb gene ID: Os05g0491200
- Gene Symbol: akin-b akin-beta
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Down-regulated genes with U-rich sequences in their 3
untranslated region (UTR) were selected from the microarray analysis of OsTZF1-OX. Two such genes were akin- and AOS.
Function-related keywords:
Literature:
- OsTZF1, a CCCH-tandem zinc finger protein, confers delayed senescence and stress tolerance in rice by regulating stress-related genes . DOI: 10.1104/pp.112.205385 ; PMID: 23296688
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g41220.2 cDNA TAAACTTGGCCGATCCAACGGCGGGGGAAATCCGCCGGAAATTAAAGCCGGCGCCGCGAGCGTGCGGGCGTGGCGCGGCGTGCGAGTCACGTGACCCACGTGCCAAACTGCCTCTTATATCGCCTCCTCCTCCTCCTCCCCTGCCTCCGGCGAAGCGGCCGGCGGCTGAGGCGAGATTCGCGGCGACCACGTCGGCGAGGAGCGCGAGAGTGGGGGCCCTCCTCCTGTCCGCCGTCCGCATTCTCGTCGTGTCTGGTTTGAGCTGCTGCTGCTGCTGCTGCCGGTGGGAGTTGGGCTGCTTGCTTGCTTGGTTTGATTGGTGGAGGTGGGAGGAGTACTGGAGTAGGCGAGTAGCTGTGGGTTGGGGTCGGCGAGGGATCCGGGCGGCGGGGTATGGGGAACGCGAGCGGCAAGGAAGGGGAGGAGAACGGCCACGTGGCGGCGGGGGCCGCCGCCGGAGTGGCTGGCTCGGCGGGGGCAGCGGCCCGGGCTCCGCCGCCGCTTATGCCGCCGGACGCCGTGATGCGGGAGCTGCCTCCCCCGGTGCCCTACGTCTTCACGCCGCAGGTTCCAGTAGCCCCACTGCATATACCTACTGAATTTTCTCCTGTTTTCAACAATTCATGGATAAATGAATCGGATGAATCCACCAATAACCATCCCCAGGAGAAGGGAATTCCAACTTTGATCTCATGGAGTCAAGGAGGAAATGAGGTGTTTGTGGAAGGATCATGGGATAACTGGACATCAAGGTACATGCTATTTAACAATGAAATTTCATGTTCAGATTGTTTCCACATTTCAGAAATAAGATGCTAAAATACAAATCCGGCATTTTATTGTCAGGAGGGTGTTAGAGAAGTCTGGGAAAGACCATACCATATTGCTAGTTCTGCCATCAGGGGTATACCATTACAGGATCATCGTCGATGGGGAACCGAAATATGTCCCTGAACTACCTCATGTGGCTGATGAGGGAGGGCAGGTTGCCAACCTCCTCGATGTCCATGTCAGTAAGAATATGCTAATTATTGATTTTAGCAATCAAAATTGAGAGAACCTAAAACCGCAAAGGCAAAAAAAAATGTGCATTTCCCTCTTGGTTTTATCTGAAGACATCTTTGTTTTGAATAGGATTATATCCCAGAAAGCCTGGGCAGCGTGGCAGGATTCGACTCTCCTCCGTCGCCTGAACACAGCTATGATCTCCAGCTCCCAGGTGATGAGGAGTTTGCCAAGGAGCCACCTATACTGCCACCTCAGCTTGTAATGTCTGTTCTTGGTGATACTGATAACTCTGAAGAACAAACTCTGAAGCCAAAGCATGTTGTCCTCAACCACCTGTATATCGAGAAAGGATGGGGATCGCAGTCGCTGCTTGCTCTTGGAGTCACTCACCGGTTTCAATCCAAGTATGTAAGCTTCGTGCTGTACAAGCCGCTGCGAAGGTCATCCACGGCGAAGCGAACAAAGAATGGTGGTTAAACTCATGGTAACTGACAATGTACATAAGTGAAATGCAGGAGGTCTTGTTGTTTGATGCTGATCAAAGCAATCAACTTTTTTTTTAATTTCTCTCTTTGTTTCTTTAATAAGCTGTTGTTGTAGCATGATGTTTTAGAAGCCTGAACTCTATGAGAAAATGAGTCAAGAGAGGGATGAAAAAAAAAGAGAATATCCCTCTATGCTTACCTAATGTCAGTGTGCAAATTTGTGTGGTCTGAGAGTAATGGTGCATGGAAATTTGAAAAAGCCTGTGAATTTATGCAAATATGTGTTCTCATTTTTCCTGTGATGCGGAGAAACTGGAAGAAAGAAGATGCTGAGACCAGCAGCTGCTGAAGAA
- >LOC_Os05g41220.1 cDNA TAAACTTGGCCGATCCAACGGCGGGGGAAATCCGCCGGAAATTAAAGCCGGCGCCGCGAGCGTGCGGGCGTGGCGCGGCGTGCGAGTCACGTGACCCACGTGCCAAACTGCCTCTTATATCGCCTCCTCCTCCTCCTCCCCTGCCTCCGGCGAAGCGGCCGGCGGCTGAGGCGAGATTCGCGGCGACCACGTCGGCGAGGAGCGCGAGAGTGGGGGCCCTCCTCCTGTCCGCCGTCCGCATTCTCGTCGTGTCTGGTTTGAGCTGCTGCTGCTGCTGCTGCCGGTGGGAGTTGGGCTGCTTGCTTGCTTGGTTTGATTGGTGGAGGTGGGAGGAGTACTGGAGTAGGCGAGTAGCTGTGGGTTGGGGTCGGCGAGGGATCCGGGCGGCGGGGTATGGGGAACGCGAGCGGCAAGGAAGGGGAGGAGAACGGCCACGTGGCGGCGGGGGCCGCCGCCGGAGTGGCTGGCTCGGCGGGGGCAGCGGCCCGGGCTCCGCCGCCGCTTATGCCGCCGGACGCCGTGATGCGGGAGCTGCCTCCCCCGGTGCCCTACGTCTTCACGCCGCAGGTTCCAGTAGCCCCACTGCATATACCTACTGAATTTTCTCCTGTTTTCAACAATTCATGGATAAATGAATCGGATGAATCCACCAATAACCATCCCCAGGAGAAGGGAATTCCAACTTTGATCTCATGGAGTCAAGGAGGAAATGAGGTGTTTGTGGAAGGATCATGGGATAACTGGACATCAAGGTACATGCTATTTAACAATGAAATTTCATGTTCAGATTGTTTCCACATTTCAGAAATAAGATGCTAAAATACAAATCCGGCATTTTATTGTCAGGAGGGTGTTAGAGAAGTCTGGGAAAGACCATACCATATTGCTAGTTCTGCCATCAGGGGTATACCATTACAGGATCATCGTCGATGGGGAACCGAAATATGTCCCTGAACTACCTCATGTGGCTGATGAGGGAGGGCAGGTTGCCAACCTCCTCGATGTCCATGTCAGTAAGAATATGCTAATTATTGATTTTAGCAATCAAAATTGAGAGAACCTAAAACCGCAAAGGCAAAAAAAAATGTGCATTTCCCTCTTGGTTTTATCTGAAGACATCTTTGTTTTGAATAGGATTATATCCCAGAAAGCCTGGGCAGCGTGGCAGGATTCGACTCTCCTCCGTCGCCTGAACACAGCTATGATCTCCAGCTCCCAGGTGATGAGGAGTTTGCCAAGGAGCCACCTATACTGCCACCTCAGCTTGTAATGTCTGTTCTTGGTGATACTGATAACTCTGAAGAACAAACTCTGAAGCCAAAGCATGTTGTCCTCAACCACCTGTATATCGAGAAAGGATGGGGATCGCAGTCGCTGCTTGCTCTTGGAGTCACTCACCGGTTTCAATCCAAGTATGTAAGCTTCGTGCTGTACAAGCCGCTGCGAAGGTCATCCACGGCGAAGCGAACAAAGAATGGTGGTTAAACTCATGGTAACTGACAATGTACATAAGTGAAATGCAGGAGGTCTTGTTGTTTGATGCTGATCAAAGCAATCAACTTTTTTTTTAATTTCTCTCTTTGTTTCTTTAATAAGCTGTTGTTGTAGCATGATGTTTTAGAAGCCTGAACTCTATGAGAAAATGAGTCAAGAGAGGGATGAAAAAAAAAGAGAATATCCCTCTATGCTTACCTAATGTCAGTGTGCAAATTTGTGTGGTCTGAGAGTAATGGTGCATGGAAATTTGAAAAAGCCTGTGAATTTATGCAAATATGTGTTCTCATTTTTCCTGTGATGCGGAGAAACTGGAAGAAAGAAGATGCTGAGACCAGCAGCTGCTGAAGAA
CDS Sequence
- >LOC_Os05g41220.2 CDS ATGGGGAACGCGAGCGGCAAGGAAGGGGAGGAGAACGGCCACGTGGCGGCGGGGGCCGCCGCCGGAGTGGCTGGCTCGGCGGGGGCAGCGGCCCGGGCTCCGCCGCCGCTTATGCCGCCGGACGCCGTGATGCGGGAGCTGCCTCCCCCGGTGCCCTACGTCTTCACGCCGCAGGTTCCAGTAGCCCCACTGCATATACCTACTGAATTTTCTCCTGTTTTCAACAATTCATGGATAAATGAATCGGATGAATCCACCAATAACCATCCCCAGGAGAAGGGAATTCCAACTTTGATCTCATGGAGTCAAGGAGGAAATGAGGTGTTTGTGGAAGGATCATGGGATAACTGGACATCAAGGTACATGCTATTTAACAATGAAATTTCATGTTCAGATTGTTTCCACATTTCAGAAATAAGATGCTAA
- >LOC_Os05g41220.1 CDS ATGGGGAACGCGAGCGGCAAGGAAGGGGAGGAGAACGGCCACGTGGCGGCGGGGGCCGCCGCCGGAGTGGCTGGCTCGGCGGGGGCAGCGGCCCGGGCTCCGCCGCCGCTTATGCCGCCGGACGCCGTGATGCGGGAGCTGCCTCCCCCGGTGCCCTACGTCTTCACGCCGCAGGTTCCAGTAGCCCCACTGCATATACCTACTGAATTTTCTCCTGTTTTCAACAATTCATGGATAAATGAATCGGATGAATCCACCAATAACCATCCCCAGGAGAAGGGAATTCCAACTTTGATCTCATGGAGTCAAGGAGGAAATGAGGTGTTTGTGGAAGGATCATGGGATAACTGGACATCAAGGTACATGCTATTTAACAATGAAATTTCATGTTCAGATTGTTTCCACATTTCAGAAATAAGATGCTAA
Protein Sequence
- >LOC_Os05g41220.2 protein MGNASGKEGEENGHVAAGAAAGVAGSAGAAARAPPPLMPPDAVMRELPPPVPYVFTPQVPVAPLHIPTEFSPVFNNSWINESDESTNNHPQEKGIPTLISWSQGGNEVFVEGSWDNWTSRYMLFNNEISCSDCFHISEIRC*
- >LOC_Os05g41220.1 protein MGNASGKEGEENGHVAAGAAAGVAGSAGAAARAPPPLMPPDAVMRELPPPVPYVFTPQVPVAPLHIPTEFSPVFNNSWINESDESTNNHPQEKGIPTLISWSQGGNEVFVEGSWDNWTSRYMLFNNEISCSDCFHISEIRC*