Gene Details:
- MSU gene ID: LOC_Os05g41440
- RAPdb gene ID: Os05g0494000
- Gene Symbol: OsC3H1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Downregulation of p-COUMAROYL ESTER 3-HYDROXYLASE in rice leads to altered cell wall structures and improves biomass saccharification . DOI: 10.1111/tpj.13988 ; PMID: 29890017
Related News:
Gene Resources:
- NCBI ID: AK099695
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os05g41440.1 cDNA ACCAACCACCCCCCCCCCCCCCCAAAACCAAACGGAGGCGAGCTCGCCGCCGTTCACCGCCGCCGCCGCTGCCATGGACGTCGCGTCGCTGCTCCCGTTCGCGCTGGCGCTGGTGGCGATCCCGATCTCGCTGGCGCTGCTGGACCGGCTGCGGCTGGGGCGGATCCCGCCGGGGCCGCGGCCGTGGCCGATGGTGGGGAACCTGTGGCAGATCAAGCCGGTGCGGTGCCGCGGCTTCCTGGAGTGGGCGGAGAGGTACGGCCCGATCGTGTCGGTGTGGTTCGGCTCGTCGCTGAACGTGGTGGTGTCGACGTCGGAGCTCGCCAAGGAGGTGCTCAAGGAGAACGACCAGCTGCTCGCCGACCGGCCGCGCAACCGCTCCACGCAGCGCTTCAGCCGCAACGGGATGGACCTGATCTGGGCGGACTACGGCCCGCACTACATCAAGGTGCGCAAGCTCTGCAACCTCGAGCTCTTCACCCCCAAGCGCCTCGAGGCCCTCCGCCCCATCCGCGAGGACGAGGTCACCGCCATGGTCGAGTCCGTCCACCGCGCCGTCACCCAGCCAGGTAGTGAACATAAACCAATCGTAGTGAGGAATCACCTTGCTATGGTGGCCTTCAACAATATAACAAGGCTAGCTTTCGGCAAGAGGTTCATGAATGCAAATGGTGACATTGATGAACAAGGGCGTGAGTTTAAGACTATTGTCAACAATGGAATCAAGATCGGTGCATCTCTTTCTGTTGCTGAGTACATTTGGTATTTGAGGTGGTTGTGTCCACTTAACGAGGAGCTTTACAAGACCCACAACGAGAGAAGGGATCGGCTGACCAAGAAGATCATAGATGAGCATGCGAAGGCCCTCAAGGAGAGTGGTGCCAAGCAGCACTTTGTGGATGCTCTGTTCACTCTCAGAGAACAGTATGACCTTAGTGACGACACAGTTATTGGGCTTCTATGGGACATGATCACTGCTGGAATGGACACCACAGTGATATCAGTCGAGTGGGCAATGGCAGAGCTGGTCAGGAACCCCAGGGTGCAGAAGAAGCTGCAGGAGGAGCTGGACCGCGTCGTCGGCCGCGACCGCGTCATGTCGGAGACCGACTTCCAGAGCCTCCCTTACCTGAACGCCGTCGTCAAGGAGTCGCTCCGGCTGCACCCGCCGACGCCGCTGATGCTCCCGCACAAGGCCAGCACGAACGTCAAGATCGGCGGGTACAACATCCCCAAGGGCGCCAACGTGATGGTGAACGTGTGGGCGATCGCCAGGGACCCCAAGGTGTGGAGCAACCCGCTGGAGTACAGGCCGGAGCGGTTCATCGAGGAGAACATCGACATCAAGGGCAGCGACTTCAGGGTGCTCCCCTTCGGCGCCGGCCGCCGCGTGTGCCCCGGCGCCCAGCTCGGCATCAACCTCGTCGCCTCCATGATCGGGCACCTCCTCCACCAGTTCGAGTGGTCTCTCCCCGAGGGCACCAGGCCGGAGGACGTCAACATGATGGAGTCCAACGGCGTCGTCACGTTCATGAGCACGTCGCTGCAGGTCATCGCCAAGCCCAGGCTCGACAACCCGGACCTGTACAAGAGGTTCCCTGTCGAGATGTGATCGAACAGTTTGCTTTGCTGCCTGCTGCTGCTGGTTATACAGACAGACTGGAGTTCTGCTTTCAAAGTTTCAGCTATTGCTCATGATGTTGTTGTTGTAAAATTTGAGGTGTTAATTGCCTTGTGAATGAACGAATCAATCAATCTCGTAAAGTTATCGAGAGCAGATCGACTTTTGTAATTTGTACAATATGACTATGTACTTAAGGTGTTTTGTTCAGATAGAATTTTGTAATATGATTAACACGACAAGCGATGTATTTTGAGGTGTCATTAATGAATAATAATAATGTAATGTAATCTGCAATTTTTCTTTTTTTTTCTTTC
- >LOC_Os05g41440.2 cDNA ACCAACCACCCCCCCCCCCCCCCAAAACCAAACGGAGGCGAGCTCGCCGCCGTTCACCGCCGCCGCCGCTGCCATGGACGTCGCGTCGCTGCTCCCGTTCGCGCTGGCGCTGGTGGCGATCCCGATCTCGCTGGCGCTGCTGGACCGGCTGCGGCTGGGGCGGATCCCGCCGGGGCCGCGGCCGTGGCCGATGGTGGGGAACCTGTGGCAGATCAAGCCGGTGCGGTGCCGCGGCTTCCTGGAGTGGGCGGAGAGGTACGGCCCGATCGTGTCGGTGTGGTTCGGCTCGTCGCTGAACGTGGTGGTGTCGACGTCGGAGCTCGCCAAGGAGGTGCTCAAGGAGAACGACCAGCTGCTCGCCGACCGGCCGCGCAACCGCTCCACGCAGCGCTTCAGCCGCAACGGGATGGACCTGATCTGGGCGGACTACGGCCCGCACTACATCAAGGTGCGCAAGCTCTGCAACCTCGAGCTCTTCACCCCCAAGCGCCTCGAGGCCCTCCGCCCCATCCGCGAGGACGAGGTCACCGCCATGGTCGAGTCCGTCCACCGCGCCGTCACCCAGCCAGGTAGTGAACATAAACCAATCGTAGTGAGGAATCACCTTGCTATGGTGGCCTTCAACAATATAACAAGGCTAGCTTTCGGCAAGAGGTTCATGAATGCAAATGGTGACATTGATGAACAAGGGCGTGAGTTTAAGACTATTGTCAACAATGGAATCAAGATCGGTGCATCTCTTTCTGTTGCTGAGTACATTTGGTATTTGAGGTGGTTGTGTCCACTTAACGAGGAGCTTTACAAGACCCACAACGAGAGAAGGGATCGGCTGACCAAGAAGATCATAGATGAGCATGCGAAGGCCCTCAAGGAGAGTGGTGCCAAGCAGCACTTTGTGGATGCTCTGTTCACTCTCAGAGAACAGTATGACCTTAGTGACGACACAGTTATTGGGCTTCTATGGGACATGATCACTGCTGGAATGGACACCACAGTGATATCAGTCGAGTGGGCAATGGCAGAGCTGGTCAGGAACCCCAGGGTGCAGAAGAAGCTGCAGGAGGAGCTGGACCGCGTCGTCGGCCGCGACCGCGTCATGTCGGAGACCGACTTCCAGAGCCTCCCTTACCTGAACGCCGTCGTCAAGGAGTCGCTCCGGCTGCACCCGCCGACGCCGCTGATGCTCCCGCACAAGGCCAGCACGAACGTCAAGATCGGCGGGTACAACATCCCCAAGGGCGCCAACGTGATGGTGAACGTGTGGGCGATCGCCAGGGACCCCAAGGTGTGGAGCAACCCGCTGGAGTACAGGCCGGAGCGGTTCATCGAGGAGAACATCGACATCAAGGGCAGCGACTTCAGGGTGCTCCCCTTCGGCGCCGGCCGCCGCGTGTGCCCCGGCGCCCAGCTCGGCATCAACCTCGTCGCCTCCATGATCGGGCACCTCCTCCACCAGTTCGAGTGGTCTCTCCCCGAGGGCACCAGGCCGGAGGACGTCAACATGATGGAGTCCAACGGCGTCGTCACGTTCATGAGCACGTCGCTGCAGGTCATCGCCAAGCCCAGGCTCGACAACCCGGACCTGTACAAGAGGTTCCCTGTCGAGATGTGATCGAACAGTTTGCTTTGCTGCCTGCTGCTGCTGGTTATACAGACAGACTGGAGTTCTGCTTTCAAAGTTTCAGCTATTGCTCATGATGTTGTTGTTGTAAAATTTGAGGTGTTAATTGCCTTGTGAATGAACGAATCAATCAATCTCGTAAAGTTATCGAGAGCAGATCGACTTTTGTAATTTGTACAATATGACTATGTACTTAAGGTGTTTTGTTCAGATAGAATTTTGTAATATGATTAACACGACAAGCGATGTATTTTGAGGTGTCATTAATGAATAATAATAATGTAATGTAATCTGCAATTTTTCTTTTTTTTTCTTTC
CDS Sequence
- >LOC_Os05g41440.1 CDS ATGGACGTCGCGTCGCTGCTCCCGTTCGCGCTGGCGCTGGTGGCGATCCCGATCTCGCTGGCGCTGCTGGACCGGCTGCGGCTGGGGCGGATCCCGCCGGGGCCGCGGCCGTGGCCGATGGTGGGGAACCTGTGGCAGATCAAGCCGGTGCGGTGCCGCGGCTTCCTGGAGTGGGCGGAGAGGTACGGCCCGATCGTGTCGGTGTGGTTCGGCTCGTCGCTGAACGTGGTGGTGTCGACGTCGGAGCTCGCCAAGGAGGTGCTCAAGGAGAACGACCAGCTGCTCGCCGACCGGCCGCGCAACCGCTCCACGCAGCGCTTCAGCCGCAACGGGATGGACCTGATCTGGGCGGACTACGGCCCGCACTACATCAAGGTGCGCAAGCTCTGCAACCTCGAGCTCTTCACCCCCAAGCGCCTCGAGGCCCTCCGCCCCATCCGCGAGGACGAGGTCACCGCCATGGTCGAGTCCGTCCACCGCGCCGTCACCCAGCCAGGTAGTGAACATAAACCAATCGTAGTGAGGAATCACCTTGCTATGGTGGCCTTCAACAATATAACAAGGCTAGCTTTCGGCAAGAGGTTCATGAATGCAAATGGTGACATTGATGAACAAGGGCGTGAGTTTAAGACTATTGTCAACAATGGAATCAAGATCGGTGCATCTCTTTCTGTTGCTGAGTACATTTGGTATTTGAGGTGGTTGTGTCCACTTAACGAGGAGCTTTACAAGACCCACAACGAGAGAAGGGATCGGCTGACCAAGAAGATCATAGATGAGCATGCGAAGGCCCTCAAGGAGAGTGGTGCCAAGCAGCACTTTGTGGATGCTCTGTTCACTCTCAGAGAACAGTATGACCTTAGTGACGACACAGTTATTGGGCTTCTATGGGACATGATCACTGCTGGAATGGACACCACAGTGATATCAGTCGAGTGGGCAATGGCAGAGCTGGTCAGGAACCCCAGGGTGCAGAAGAAGCTGCAGGAGGAGCTGGACCGCGTCGTCGGCCGCGACCGCGTCATGTCGGAGACCGACTTCCAGAGCCTCCCTTACCTGAACGCCGTCGTCAAGGAGTCGCTCCGGCTGCACCCGCCGACGCCGCTGATGCTCCCGCACAAGGCCAGCACGAACGTCAAGATCGGCGGGTACAACATCCCCAAGGGCGCCAACGTGATGGTGAACGTGTGGGCGATCGCCAGGGACCCCAAGGTGTGGAGCAACCCGCTGGAGTACAGGCCGGAGCGGTTCATCGAGGAGAACATCGACATCAAGGGCAGCGACTTCAGGGTGCTCCCCTTCGGCGCCGGCCGCCGCGTGTGCCCCGGCGCCCAGCTCGGCATCAACCTCGTCGCCTCCATGATCGGGCACCTCCTCCACCAGTTCGAGTGGTCTCTCCCCGAGGGCACCAGGCCGGAGGACGTCAACATGATGGAGTCCAACGGCGTCGTCACGTTCATGAGCACGTCGCTGCAGGTCATCGCCAAGCCCAGGCTCGACAACCCGGACCTGTACAAGAGGTTCCCTGTCGAGATGTGA
- >LOC_Os05g41440.2 CDS ATGGACGTCGCGTCGCTGCTCCCGTTCGCGCTGGCGCTGGTGGCGATCCCGATCTCGCTGGCGCTGCTGGACCGGCTGCGGCTGGGGCGGATCCCGCCGGGGCCGCGGCCGTGGCCGATGGTGGGGAACCTGTGGCAGATCAAGCCGGTGCGGTGCCGCGGCTTCCTGGAGTGGGCGGAGAGGTACGGCCCGATCGTGTCGGTGTGGTTCGGCTCGTCGCTGAACGTGGTGGTGTCGACGTCGGAGCTCGCCAAGGAGGTGCTCAAGGAGAACGACCAGCTGCTCGCCGACCGGCCGCGCAACCGCTCCACGCAGCGCTTCAGCCGCAACGGGATGGACCTGATCTGGGCGGACTACGGCCCGCACTACATCAAGGTGCGCAAGCTCTGCAACCTCGAGCTCTTCACCCCCAAGCGCCTCGAGGCCCTCCGCCCCATCCGCGAGGACGAGGTCACCGCCATGGTCGAGTCCGTCCACCGCGCCGTCACCCAGCCAGGTAGTGAACATAAACCAATCGTAGTGAGGAATCACCTTGCTATGGTGGCCTTCAACAATATAACAAGGCTAGCTTTCGGCAAGAGGTTCATGAATGCAAATGGTGACATTGATGAACAAGGGCGTGAGTTTAAGACTATTGTCAACAATGGAATCAAGATCGGTGCATCTCTTTCTGTTGCTGAGTACATTTGGTATTTGAGGTGGTTGTGTCCACTTAACGAGGAGCTTTACAAGACCCACAACGAGAGAAGGGATCGGCTGACCAAGAAGATCATAGATGAGCATGCGAAGGCCCTCAAGGAGAGTGGTGCCAAGCAGCACTTTGTGGATGCTCTGTTCACTCTCAGAGAACAGTATGACCTTAGTGACGACACAGTTATTGGGCTTCTATGGGACATGATCACTGCTGGAATGGACACCACAGTGATATCAGTCGAGTGGGCAATGGCAGAGCTGGTCAGGAACCCCAGGGTGCAGAAGAAGCTGCAGGAGGAGCTGGACCGCGTCGTCGGCCGCGACCGCGTCATGTCGGAGACCGACTTCCAGAGCCTCCCTTACCTGAACGCCGTCGTCAAGGAGTCGCTCCGGCTGCACCCGCCGACGCCGCTGATGCTCCCGCACAAGGCCAGCACGAACGTCAAGATCGGCGGGTACAACATCCCCAAGGGCGCCAACGTGATGGTGAACGTGTGGGCGATCGCCAGGGACCCCAAGGTGTGGAGCAACCCGCTGGAGTACAGGCCGGAGCGGTTCATCGAGGAGAACATCGACATCAAGGGCAGCGACTTCAGGGTGCTCCCCTTCGGCGCCGGCCGCCGCGTGTGCCCCGGCGCCCAGCTCGGCATCAACCTCGTCGCCTCCATGATCGGGCACCTCCTCCACCAGTTCGAGTGGTCTCTCCCCGAGGGCACCAGGCCGGAGGACGTCAACATGATGGAGTCCAACGGCGTCGTCACGTTCATGAGCACGTCGCTGCAGGTCATCGCCAAGCCCAGGCTCGACAACCCGGACCTGTACAAGAGGTTCCCTGTCGAGATGTGA
Protein Sequence
- >LOC_Os05g41440.1 protein MDVASLLPFALALVAIPISLALLDRLRLGRIPPGPRPWPMVGNLWQIKPVRCRGFLEWAERYGPIVSVWFGSSLNVVVSTSELAKEVLKENDQLLADRPRNRSTQRFSRNGMDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVHRAVTQPGSEHKPIVVRNHLAMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLSVAEYIWYLRWLCPLNEELYKTHNERRDRLTKKIIDEHAKALKESGAKQHFVDALFTLREQYDLSDDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMSETDFQSLPYLNAVVKESLRLHPPTPLMLPHKASTNVKIGGYNIPKGANVMVNVWAIARDPKVWSNPLEYRPERFIEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHQFEWSLPEGTRPEDVNMMESNGVVTFMSTSLQVIAKPRLDNPDLYKRFPVEM*
- >LOC_Os05g41440.2 protein MDVASLLPFALALVAIPISLALLDRLRLGRIPPGPRPWPMVGNLWQIKPVRCRGFLEWAERYGPIVSVWFGSSLNVVVSTSELAKEVLKENDQLLADRPRNRSTQRFSRNGMDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVHRAVTQPGSEHKPIVVRNHLAMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLSVAEYIWYLRWLCPLNEELYKTHNERRDRLTKKIIDEHAKALKESGAKQHFVDALFTLREQYDLSDDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMSETDFQSLPYLNAVVKESLRLHPPTPLMLPHKASTNVKIGGYNIPKGANVMVNVWAIARDPKVWSNPLEYRPERFIEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHQFEWSLPEGTRPEDVNMMESNGVVTFMSTSLQVIAKPRLDNPDLYKRFPVEM*